RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 ADCY10Q96PN6 1610 aa8.17□□□□□ -1.1
ZEB1-217ENST00000559858 NOLC1Q14978 699 aaKnown RBP eCLIP8.16□□□□□ -1.1
ZEB1-217ENST00000559858 CCDC27Q2M243 656 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 TCP11L2Q8N4U5 519 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 GPT2Q8TD30 523 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 RAPGEF6Q8TEU7 1601 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 SYCE3A1L190 88 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 RABEP1Q15276 862 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 CHD1LQ86WJ1 897 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 JARID2Q92833 1246 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-217ENST00000559858 RRP7AQ9Y3A4 280 aaKnown RBP8.16□□□□□ -1.1
ZEB1-217ENST00000559858 SYNJ2O15056 1496 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 PLA2R1Q13018 1463 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 MBD3O95983 291 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 NCBP3Q53F19 620 aaKnown RBP8.16□□□□□ -1.1
ZEB1-217ENST00000559858 ITPRIPQ8IWB1 547 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 LNPKQ9C0E8 428 aa8.16□□□□□ -1.1
ZEB1-217ENST00000559858 TAF7LQ5H9L4 462 aa8.15□□□□□ -1.1
ZEB1-217ENST00000559858 FEZ1Q99689 392 aa8.15□□□□□ -1.1
ZEB1-217ENST00000559858 BCL2L12Q9HB09 334 aa8.15□□□□□ -1.1
ZEB1-217ENST00000559858 TMEM63CQ9P1W3 806 aa8.15□□□□□ -1.1
ZEB1-217ENST00000559858 RNF17Q9BXT8 1623 aaKnown RBP8.15□□□□□ -1.1
ZEB1-217ENST00000559858 AK9Q5TCS8 1911 aa8.15□□□□□ -1.11
ZEB1-217ENST00000559858 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.11
ZEB1-217ENST00000559858 TBC1D9Q6ZT07 1266 aa8.15□□□□□ -1.11
ZEB1-217ENST00000559858 ZNF771Q7L3S4 317 aaPredicted RBP8.15□□□□□ -1.11
ZEB1-217ENST00000559858 TSPY26PQ9H489 355 aa8.15□□□□□ -1.11
ZEB1-217ENST00000559858 TRIM27P14373 513 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 CDK11BP21127 795 aaKnown RBP8.14□□□□□ -1.11
ZEB1-217ENST00000559858 RNF214Q8ND24 703 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 DIAPH3Q9NSV4 1193 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 ZBTB40Q9NUA8 1239 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 SPTLC3Q9NUV7 552 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 CGNQ9P2M7 1197 aaKnown RBP8.14□□□□□ -1.11
ZEB1-217ENST00000559858 URB2Q14146 1524 aaKnown RBP8.14□□□□□ -1.11
ZEB1-217ENST00000559858 PBRM1Q86U86 1689 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 MYO5CQ9NQX4 1742 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 UVSSAQ2YD98 709 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 ATF7IPQ6VMQ6 1270 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 SMC4Q9NTJ3 1288 aa8.14□□□□□ -1.11
ZEB1-217ENST00000559858 CDC42BPAQ5VT25 1732 aa8.13□□□□□ -1.11
ZEB1-217ENST00000559858 GABPB1Q06547 395 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-217ENST00000559858 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-217ENST00000559858 ANKRD7Q92527 254 aa8.13□□□□□ -1.11
ZEB1-217ENST00000559858 CFAP44Q96MT7 982 aa8.13□□□□□ -1.11
ZEB1-217ENST00000559858 OGFRQ9NZT2 677 aa8.13□□□□□ -1.11
ZEB1-217ENST00000559858 CHAF1AQ13111 956 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-217ENST00000559858 SYAP1Q96A49 352 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-217ENST00000559858 IQSEC2Q5JU85 1478 aa8.13□□□□□ -1.11
ZEB1-217ENST00000559858 IQGAP1P46940 1657 aa8.12□□□□□ -1.11
ZEB1-217ENST00000559858 ZBTB7CA1YPR0 619 aa8.12□□□□□ -1.11
ZEB1-217ENST00000559858 CDC45O75419 566 aa8.12□□□□□ -1.11
ZEB1-217ENST00000559858 ZNF830Q96NB3 372 aaPredicted RBP8.12□□□□□ -1.11
ZEB1-217ENST00000559858 SCAF11Q99590 1463 aaKnown RBP8.12□□□□□ -1.11
ZEB1-217ENST00000559858 MYOM1P52179 1685 aa8.12□□□□□ -1.11
ZEB1-217ENST00000559858 U2AF2P26368 475 aaKnown RBP eCLIP8.12□□□□□ -1.117e-7■■■■■ 29.9
ZEB1-217ENST00000559858 PKP1Q13835 747 aa8.12□□□□□ -1.11
ZEB1-217ENST00000559858 FAM184AQ8NB25 1140 aa8.12□□□□□ -1.11
ZEB1-217ENST00000559858 KIAA0556O60303 1618 aa8.12□□□□□ -1.11
ZEB1-217ENST00000559858 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 IPO8O15397 1037 aaKnown RBP8.11□□□□□ -1.11
ZEB1-217ENST00000559858 PHF14O94880 888 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 ANKRD45Q5TZF3 282 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 TMEM57Q8N5G2 664 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 GCC1Q96CN9 775 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 CFAP74Q9C0B2 1584 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 DISP1Q96F81 1524 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 VGLL3A8MV65 326 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 IGSF3O75054 1194 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 CARD14Q9BXL6 1004 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 ZDHHC9Q9Y397 364 aa8.11□□□□□ -1.11
ZEB1-217ENST00000559858 CCDC66A2RUB6 948 aa8.1□□□□□ -1.11
ZEB1-217ENST00000559858 SSH1Q8WYL5 1049 aa8.1□□□□□ -1.11
ZEB1-217ENST00000559858 NOB1Q9ULX3 412 aaKnown RBP8.1□□□□□ -1.11
ZEB1-217ENST00000559858 NSFL1CQ9UNZ2 370 aaKnown RBP8.1□□□□□ -1.11
ZEB1-217ENST00000559858 CTIFO43310 598 aaKnown RBP8.1□□□□□ -1.11
ZEB1-217ENST00000559858 ST18O60284 1047 aa8.1□□□□□ -1.11
ZEB1-217ENST00000559858 HNRNPMP52272 730 aaKnown RBP eCLIP8.1□□□□□ -1.114e-6■■■■□ 20.1
ZEB1-217ENST00000559858 ARHGEF5Q12774 1597 aa8.1□□□□□ -1.11
ZEB1-217ENST00000559858 ATP10AO60312 1499 aa8.1□□□□□ -1.11
ZEB1-217ENST00000559858 KDM5AP29375 1690 aaKnown RBP8.1□□□□□ -1.11
ZEB1-217ENST00000559858 RIOK3O14730 519 aaKnown RBP8.09□□□□□ -1.11
ZEB1-217ENST00000559858 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
ZEB1-217ENST00000559858 MORC1Q86VD1 984 aa8.09□□□□□ -1.11
ZEB1-217ENST00000559858 TTC12Q9H892 705 aaPredicted RBP8.09□□□□□ -1.11
ZEB1-217ENST00000559858 KCNJ4P48050 445 aa8.09□□□□□ -1.11
ZEB1-217ENST00000559858 IRX5P78411 483 aaPredicted RBP8.09□□□□□ -1.11
ZEB1-217ENST00000559858 SLC20A2Q08357 652 aa8.09□□□□□ -1.11
ZEB1-217ENST00000559858 SYCP1Q15431 976 aa8.09□□□□□ -1.11
ZEB1-217ENST00000559858 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
ZEB1-217ENST00000559858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.09□□□□□ -1.11
ZEB1-217ENST00000559858 SHPRHQ149N8 1683 aa8.09□□□□□ -1.11
ZEB1-217ENST00000559858 REREQ9P2R6 1566 aa8.09□□□□□ -1.11
ZEB1-217ENST00000559858 ADCY5O95622 1261 aa8.09□□□□□ -1.12
ZEB1-217ENST00000559858 TPM3P06753 285 aa8.09□□□□□ -1.12
ZEB1-217ENST00000559858 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.12
ZEB1-217ENST00000559858 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.12
ZEB1-217ENST00000559858 CFAP53Q96M91 514 aa8.09□□□□□ -1.12
ZEB1-217ENST00000559858 USP26Q9BXU7 913 aa8.09□□□□□ -1.12
ZEB1-217ENST00000559858 PLEKHD1A6NEE1 506 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms