RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 PMFBP1Q8TBY8 1022 aa13.59□□□□□ -0.23
SNRPA1-208ENST00000559686 CAMTA1Q9Y6Y1 1673 aa13.59□□□□□ -0.23
SNRPA1-208ENST00000559686 ADGRB2O60241 1585 aa13.58□□□□□ -0.23
SNRPA1-208ENST00000559686 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
SNRPA1-208ENST00000559686 APBA3O96018 575 aa13.58□□□□□ -0.24
SNRPA1-208ENST00000559686 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNRPA1-208ENST00000559686 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-208ENST00000559686 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-208ENST00000559686 ARHGEF10O15013 1369 aa13.58□□□□□ -0.24
SNRPA1-208ENST00000559686 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
SNRPA1-208ENST00000559686 SBNO1A3KN83 1393 aa13.57□□□□□ -0.24
SNRPA1-208ENST00000559686 THSD7AQ9UPZ6 1657 aa13.56□□□□□ -0.24
SNRPA1-208ENST00000559686 DISP2A7MBM2 1401 aa13.56□□□□□ -0.24
SNRPA1-208ENST00000559686 TECPR2O15040 1411 aa13.56□□□□□ -0.24
SNRPA1-208ENST00000559686 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-208ENST00000559686 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
SNRPA1-208ENST00000559686 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-208ENST00000559686 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
SNRPA1-208ENST00000559686 RREB1Q92766 1687 aa13.55□□□□□ -0.24
SNRPA1-208ENST00000559686 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
SNRPA1-208ENST00000559686 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
SNRPA1-208ENST00000559686 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
SNRPA1-208ENST00000559686 YTHDC2Q9H6S0 1430 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-208ENST00000559686 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-208ENST00000559686 NBPF8Q3BBV2 869 aa13.52□□□□□ -0.25
SNRPA1-208ENST00000559686 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
SNRPA1-208ENST00000559686 SPON1Q9HCB6 807 aa13.52□□□□□ -0.25
SNRPA1-208ENST00000559686 STRN4Q9NRL3 753 aa13.52□□□□□ -0.25
SNRPA1-208ENST00000559686 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
SNRPA1-208ENST00000559686 ALS2Q96Q42 1657 aa13.51□□□□□ -0.25
SNRPA1-208ENST00000559686 SENP3-EIF4A1A0A087X0R7 540 aa13.51□□□□□ -0.25
SNRPA1-208ENST00000559686 FAM196AQ6ZSG2 479 aa13.51□□□□□ -0.25
SNRPA1-208ENST00000559686 PAK3O75914 559 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-208ENST00000559686 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
SNRPA1-208ENST00000559686 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
SNRPA1-208ENST00000559686 KCNQ2O43526 872 aa13.49□□□□□ -0.25
SNRPA1-208ENST00000559686 PRAM1Q96QH2 718 aa13.49□□□□□ -0.25
SNRPA1-208ENST00000559686 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
SNRPA1-208ENST00000559686 PARD3Q8TEW0 1356 aa13.48□□□□□ -0.25
SNRPA1-208ENST00000559686 SPATA31A1Q5TZJ5 1347 aa13.48□□□□□ -0.25
SNRPA1-208ENST00000559686 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
SNRPA1-208ENST00000559686 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
SNRPA1-208ENST00000559686 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
SNRPA1-208ENST00000559686 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-208ENST00000559686 POGKQ9P215 609 aa13.47□□□□□ -0.25
SNRPA1-208ENST00000559686 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
SNRPA1-208ENST00000559686 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
SNRPA1-208ENST00000559686 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-208ENST00000559686 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-208ENST00000559686 KIAA0232Q92628 1395 aa13.45□□□□□ -0.26
SNRPA1-208ENST00000559686 NRKQ7Z2Y5 1582 aa13.45□□□□□ -0.26
SNRPA1-208ENST00000559686 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-208ENST00000559686 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
SNRPA1-208ENST00000559686 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 EVA1CP58658 441 aa13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 NUTM2GQ5VZR2 741 aa13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 SPATA31E1Q6ZUB1 1445 aa13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 UTRNP46939 3433 aa13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 DHX57Q6P158 1386 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 MYOM1P52179 1685 aa13.44□□□□□ -0.26
SNRPA1-208ENST00000559686 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-208ENST00000559686 ANKARQ7Z5J8 1434 aa13.43□□□□□ -0.26
SNRPA1-208ENST00000559686 SIRT1Q96EB6 747 aa13.43□□□□□ -0.26
SNRPA1-208ENST00000559686 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
SNRPA1-208ENST00000559686 ZBTB7AO95365 584 aa13.42□□□□□ -0.26
SNRPA1-208ENST00000559686 PDGFDQ9GZP0 370 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-208ENST00000559686 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
SNRPA1-208ENST00000559686 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-208ENST00000559686 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
SNRPA1-208ENST00000559686 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-208ENST00000559686 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-208ENST00000559686 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-208ENST00000559686 SSH2Q76I76 1423 aa13.39□□□□□ -0.27
SNRPA1-208ENST00000559686 C1QTNF8P60827 252 aa13.39□□□□□ -0.27
SNRPA1-208ENST00000559686 TRAK1Q9UPV9 953 aa13.39□□□□□ -0.27
SNRPA1-208ENST00000559686 TULP4Q9NRJ4 1543 aa13.38□□□□□ -0.27
SNRPA1-208ENST00000559686 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
SNRPA1-208ENST00000559686 TCP11L2Q8N4U5 519 aa13.37□□□□□ -0.27
SNRPA1-208ENST00000559686 ZBTB7CA1YPR0 619 aa13.36□□□□□ -0.27
SNRPA1-208ENST00000559686 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
SNRPA1-208ENST00000559686 CHD4Q14839 1912 aa13.36□□□□□ -0.27
SNRPA1-208ENST00000559686 DLC1Q96QB1 1528 aa13.35□□□□□ -0.27
SNRPA1-208ENST00000559686 SBF2Q86WG5 1849 aa13.35□□□□□ -0.27
SNRPA1-208ENST00000559686 PTF1AQ7RTS3 328 aa13.35□□□□□ -0.27
SNRPA1-208ENST00000559686 FHDC1Q9C0D6 1143 aaPredicted RBP13.35□□□□□ -0.27
SNRPA1-208ENST00000559686 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
SNRPA1-208ENST00000559686 ITSN1Q15811 1721 aa13.35□□□□□ -0.27
SNRPA1-208ENST00000559686 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-208ENST00000559686 PARP4Q9UKK3 1724 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-208ENST00000559686 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-208ENST00000559686 PTGER2P43116 358 aa13.33□□□□□ -0.28
SNRPA1-208ENST00000559686 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
SNRPA1-208ENST00000559686 SYT17Q9BSW7 474 aa13.33□□□□□ -0.28
SNRPA1-208ENST00000559686 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
SNRPA1-208ENST00000559686 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-208ENST00000559686 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
SNRPA1-208ENST00000559686 OVOS2A0A0G2JMS6 1433 aa13.32□□□□□ -0.28
SNRPA1-208ENST00000559686 OVOS2A0A0J9YW53 1432 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms