RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
SMAD3-211ENST00000559460 GPRASP1Q5JY77 1395 aa14.7□□□□□ -0.06
SMAD3-211ENST00000559460 ABCC11Q96J66 1382 aa14.7□□□□□ -0.06
SMAD3-211ENST00000559460 NRKQ7Z2Y5 1582 aa14.69□□□□□ -0.06
SMAD3-211ENST00000559460 PMFBP1Q8TBY8 1022 aa14.69□□□□□ -0.06
SMAD3-211ENST00000559460 USP35Q9P2H5 1018 aa14.69□□□□□ -0.06
SMAD3-211ENST00000559460 PPLO60437 1756 aa14.69□□□□□ -0.06
SMAD3-211ENST00000559460 KNDC1Q76NI1 1749 aa14.68□□□□□ -0.06
SMAD3-211ENST00000559460 IFT172Q9UG01 1749 aa14.68□□□□□ -0.06
SMAD3-211ENST00000559460 C11orf95C9JLR9 678 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-211ENST00000559460 EVA1CP58658 441 aa14.66□□□□□ -0.06
SMAD3-211ENST00000559460 TMEM132EQ6IEE7 984 aa14.66□□□□□ -0.06
SMAD3-211ENST00000559460 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-211ENST00000559460 ZBTB7AO95365 584 aa14.65□□□□□ -0.06
SMAD3-211ENST00000559460 ADGRF5Q8IZF2 1346 aa14.65□□□□□ -0.06
SMAD3-211ENST00000559460 BCL11BQ9C0K0 894 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-211ENST00000559460 RGPD8O14715 1765 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-211ENST00000559460 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
SMAD3-211ENST00000559460 BARGINQ6ZT62 677 aa14.63□□□□□ -0.07
SMAD3-211ENST00000559460 FHDC1Q9C0D6 1143 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-211ENST00000559460 ANKARQ7Z5J8 1434 aa14.63□□□□□ -0.07
SMAD3-211ENST00000559460 MYOM1P52179 1685 aa14.62□□□□□ -0.07
SMAD3-211ENST00000559460 SAFB2Q14151 953 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMAD3-211ENST00000559460 CHRNA2Q15822 529 aa14.62□□□□□ -0.07
SMAD3-211ENST00000559460 SYT17Q9BSW7 474 aa14.62□□□□□ -0.07
SMAD3-211ENST00000559460 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-211ENST00000559460 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
SMAD3-211ENST00000559460 ANKRD30BQ9BXX2 1392 aa14.61□□□□□ -0.07
SMAD3-211ENST00000559460 CHD4Q14839 1912 aa14.61□□□□□ -0.07
SMAD3-211ENST00000559460 SIRT1Q96EB6 747 aa14.61□□□□□ -0.07
SMAD3-211ENST00000559460 DLC1Q96QB1 1528 aa14.61□□□□□ -0.07
SMAD3-211ENST00000559460 RGL3Q3MIN7 710 aa14.6□□□□□ -0.07
SMAD3-211ENST00000559460 POGKQ9P215 609 aa14.6□□□□□ -0.07
SMAD3-211ENST00000559460 ACIN1Q9UKV3 1341 aaKnown RBP14.6□□□□□ -0.07
SMAD3-211ENST00000559460 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
SMAD3-211ENST00000559460 ALS2Q96Q42 1657 aa14.59□□□□□ -0.07
SMAD3-211ENST00000559460 TRPM3Q9HCF6 1732 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-211ENST00000559460 GPR162Q16538 588 aa14.59□□□□□ -0.07
SMAD3-211ENST00000559460 TCP11L2Q8N4U5 519 aa14.59□□□□□ -0.07
SMAD3-211ENST00000559460 NGDNQ8NEJ9 315 aaKnown RBP14.59□□□□□ -0.07
SMAD3-211ENST00000559460 ANO8Q9HCE9 1232 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-211ENST00000559460 STK32BQ9NY57 414 aa14.59□□□□□ -0.07
SMAD3-211ENST00000559460 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
SMAD3-211ENST00000559460 OVOS2A0A0G2JMS6 1433 aa14.58□□□□□ -0.07
SMAD3-211ENST00000559460 OVOS2A0A0J9YW53 1432 aa14.58□□□□□ -0.07
SMAD3-211ENST00000559460 OVOS2Q6IE36 1432 aa14.58□□□□□ -0.07
SMAD3-211ENST00000559460 CASZ1Q86V15 1759 aa14.58□□□□□ -0.08
SMAD3-211ENST00000559460 PLSCR1O15162 318 aa14.58□□□□□ -0.08
SMAD3-211ENST00000559460 PTGER2P43116 358 aa14.58□□□□□ -0.08
SMAD3-211ENST00000559460 PRAM1Q96QH2 718 aa14.58□□□□□ -0.08
SMAD3-211ENST00000559460 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
SMAD3-211ENST00000559460 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
SMAD3-211ENST00000559460 ZC3H6P61129 1189 aaKnown RBP14.57□□□□□ -0.08
SMAD3-211ENST00000559460 THRAP3Q9Y2W1 955 aaKnown RBP14.57□□□□□ -0.08
SMAD3-211ENST00000559460 RGPD3A6NKT7 1758 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-211ENST00000559460 RGPD4Q7Z3J3 1758 aa14.57□□□□□ -0.08
SMAD3-211ENST00000559460 MTFR1LQ9H019 292 aa14.56□□□□□ -0.08
SMAD3-211ENST00000559460 PIK3C2GO75747 1445 aa14.56□□□□□ -0.08
SMAD3-211ENST00000559460 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
SMAD3-211ENST00000559460 PDGFDQ9GZP0 370 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-211ENST00000559460 LARP1Q6PKG0 1096 aaKnown RBP14.54□□□□□ -0.08
SMAD3-211ENST00000559460 CRYBG1Q9Y4K1 1723 aa14.54□□□□□ -0.08
SMAD3-211ENST00000559460 ARXQ96QS3 562 aa14.53□□□□□ -0.08
SMAD3-211ENST00000559460 KLHL34Q8N239 644 aa14.52□□□□□ -0.09
SMAD3-211ENST00000559460 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
SMAD3-211ENST00000559460 PHRF1Q9P1Y6 1649 aaKnown RBP14.51□□□□□ -0.09
SMAD3-211ENST00000559460 ATP7BP35670 1465 aa14.5□□□□□ -0.09
SMAD3-211ENST00000559460 SLC15A2Q16348 729 aa14.5□□□□□ -0.09
SMAD3-211ENST00000559460 DDB1Q16531 1140 aa14.5□□□□□ -0.09
SMAD3-211ENST00000559460 NUTM2GQ5VZR2 741 aa14.5□□□□□ -0.09
SMAD3-211ENST00000559460 TULP4Q9NRJ4 1543 aa14.5□□□□□ -0.09
SMAD3-211ENST00000559460 PARP4Q9UKK3 1724 aaKnown RBP14.49□□□□□ -0.09
SMAD3-211ENST00000559460 MAP3K5Q99683 1374 aa14.48□□□□□ -0.09
SMAD3-211ENST00000559460 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
SMAD3-211ENST00000559460 C14orf93Q9H972 538 aaKnown RBP14.48□□□□□ -0.09
SMAD3-211ENST00000559460 TXNRD1Q16881 649 aa14.47□□□□□ -0.09
SMAD3-211ENST00000559460 CFAP70Q5T0N1 1121 aa14.47□□□□□ -0.09
SMAD3-211ENST00000559460 SPATA31E1Q6ZUB1 1445 aa14.47□□□□□ -0.09
SMAD3-211ENST00000559460 PRR36Q9H6K5 1346 aa14.45□□□□□ -0.1
SMAD3-211ENST00000559460 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
SMAD3-211ENST00000559460 WASLO00401 505 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-211ENST00000559460 HSPA6P17066 643 aa14.45□□□□□ -0.1
SMAD3-211ENST00000559460 CRB1P82279 1406 aa14.45□□□□□ -0.1
SMAD3-211ENST00000559460 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
SMAD3-211ENST00000559460 POLD1P28340 1107 aa14.44□□□□□ -0.1
SMAD3-211ENST00000559460 PROM2Q8N271 834 aa14.44□□□□□ -0.1
SMAD3-211ENST00000559460 CPDO75976 1380 aa14.44□□□□□ -0.1
SMAD3-211ENST00000559460 PEAK1Q9H792 1746 aa14.44□□□□□ -0.1
SMAD3-211ENST00000559460 ABTB2Q8N961 1025 aa14.43□□□□□ -0.1
SMAD3-211ENST00000559460 GPBP1L1Q9HC44 474 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-211ENST00000559460 TRAK1Q9UPV9 953 aa14.43□□□□□ -0.1
SMAD3-211ENST00000559460 LRRC37A3O60309 1634 aa14.42□□□□□ -0.1
SMAD3-211ENST00000559460 ITSN1Q15811 1721 aa14.42□□□□□ -0.1
SMAD3-211ENST00000559460 SHANK3Q9BYB0 1731 aa14.42□□□□□ -0.1
SMAD3-211ENST00000559460 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
SMAD3-211ENST00000559460 TOM1L2Q6ZVM7 507 aa14.42□□□□□ -0.1
SMAD3-211ENST00000559460 COL5A2P05997 1499 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-211ENST00000559460 SBF2Q86WG5 1849 aa14.41□□□□□ -0.1
SMAD3-211ENST00000559460 UTRNP46939 3433 aa14.41□□□□□ -0.1
SMAD3-211ENST00000559460 PTF1AQ7RTS3 328 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms