RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 SPATA31A5Q5VU36 1347 aa16.62■□□□□ 0.25
CHRNA3-205ENST00000559080 SPATA31A7Q8IWB4 1347 aa16.62■□□□□ 0.25
CHRNA3-205ENST00000559080 RREB1Q92766 1687 aa16.62■□□□□ 0.25
CHRNA3-205ENST00000559080 R3HDM1Q15032 1099 aaKnown RBP16.61■□□□□ 0.25
CHRNA3-205ENST00000559080 ADGRB1O14514 1584 aa16.6■□□□□ 0.25
CHRNA3-205ENST00000559080 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
CHRNA3-205ENST00000559080 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
CHRNA3-205ENST00000559080 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
CHRNA3-205ENST00000559080 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
CHRNA3-205ENST00000559080 TULP4Q9NRJ4 1543 aa16.58■□□□□ 0.24
CHRNA3-205ENST00000559080 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
CHRNA3-205ENST00000559080 RAB3GAP2Q9H2M9 1393 aa16.57■□□□□ 0.24
CHRNA3-205ENST00000559080 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
CHRNA3-205ENST00000559080 GPRASP1Q5JY77 1395 aa16.55■□□□□ 0.24
CHRNA3-205ENST00000559080 POGKQ9P215 609 aa16.55■□□□□ 0.24
CHRNA3-205ENST00000559080 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
CHRNA3-205ENST00000559080 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
CHRNA3-205ENST00000559080 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
CHRNA3-205ENST00000559080 TRIM37O94972 964 aa16.53■□□□□ 0.24
CHRNA3-205ENST00000559080 PRDM11Q9NQV5 511 aa16.52■□□□□ 0.24
CHRNA3-205ENST00000559080 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
CHRNA3-205ENST00000559080 MINK1Q8N4C8 1332 aaPredicted RBP16.51■□□□□ 0.23
CHRNA3-205ENST00000559080 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
CHRNA3-205ENST00000559080 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
CHRNA3-205ENST00000559080 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
CHRNA3-205ENST00000559080 EIF3AQ14152 1382 aaKnown RBP16.51■□□□□ 0.23
CHRNA3-205ENST00000559080 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
CHRNA3-205ENST00000559080 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
CHRNA3-205ENST00000559080 WASLO00401 505 aaPredicted RBP16.5■□□□□ 0.23
CHRNA3-205ENST00000559080 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
CHRNA3-205ENST00000559080 ATP7BP35670 1465 aa16.49■□□□□ 0.23
CHRNA3-205ENST00000559080 CHRNA2Q15822 529 aa16.49■□□□□ 0.23
CHRNA3-205ENST00000559080 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
CHRNA3-205ENST00000559080 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
CHRNA3-205ENST00000559080 APBA3O96018 575 aa16.48■□□□□ 0.23
CHRNA3-205ENST00000559080 NGDNQ8NEJ9 315 aaKnown RBP16.48■□□□□ 0.23
CHRNA3-205ENST00000559080 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
CHRNA3-205ENST00000559080 CAMTA1Q9Y6Y1 1673 aa16.47■□□□□ 0.23
CHRNA3-205ENST00000559080 BARGINQ6ZT62 677 aa16.46■□□□□ 0.23
CHRNA3-205ENST00000559080 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
CHRNA3-205ENST00000559080 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.22
CHRNA3-205ENST00000559080 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.22
CHRNA3-205ENST00000559080 SSH2Q76I76 1423 aa16.45■□□□□ 0.22
CHRNA3-205ENST00000559080 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
CHRNA3-205ENST00000559080 YY1P25490 414 aa16.44■□□□□ 0.22
CHRNA3-205ENST00000559080 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
CHRNA3-205ENST00000559080 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
CHRNA3-205ENST00000559080 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
CHRNA3-205ENST00000559080 NUDT16Q96DE0 195 aaKnown RBP16.42■□□□□ 0.22
CHRNA3-205ENST00000559080 POLR3AO14802 1390 aaPredicted RBP16.41■□□□□ 0.22
CHRNA3-205ENST00000559080 WNK3Q9BYP7 1800 aa16.41■□□□□ 0.22
CHRNA3-205ENST00000559080 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
CHRNA3-205ENST00000559080 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
CHRNA3-205ENST00000559080 LARP1Q6PKG0 1096 aaKnown RBP16.4■□□□□ 0.22
CHRNA3-205ENST00000559080 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
CHRNA3-205ENST00000559080 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
CHRNA3-205ENST00000559080 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
CHRNA3-205ENST00000559080 CPDO75976 1380 aa16.38■□□□□ 0.21
CHRNA3-205ENST00000559080 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
CHRNA3-205ENST00000559080 EVA1CP58658 441 aa16.38■□□□□ 0.21
CHRNA3-205ENST00000559080 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
CHRNA3-205ENST00000559080 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
CHRNA3-205ENST00000559080 SPON1Q9HCB6 807 aa16.38■□□□□ 0.21
CHRNA3-205ENST00000559080 ACEP12821 1306 aa16.38■□□□□ 0.21
CHRNA3-205ENST00000559080 AKAP12Q02952 1782 aa16.37■□□□□ 0.21
CHRNA3-205ENST00000559080 KCNQ2O43526 872 aa16.37■□□□□ 0.21
CHRNA3-205ENST00000559080 USP19O94966 1318 aa16.37■□□□□ 0.21
CHRNA3-205ENST00000559080 CHD4Q14839 1912 aa16.37■□□□□ 0.21
CHRNA3-205ENST00000559080 NINLQ9Y2I6 1382 aa16.37■□□□□ 0.21
CHRNA3-205ENST00000559080 COL5A2P05997 1499 aaPredicted RBP16.36■□□□□ 0.21
CHRNA3-205ENST00000559080 COL18A1P39060 1754 aa16.36■□□□□ 0.21
CHRNA3-205ENST00000559080 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
CHRNA3-205ENST00000559080 CDK19Q9BWU1 502 aa16.36■□□□□ 0.21
CHRNA3-205ENST00000559080 THRAP3Q9Y2W1 955 aaKnown RBP16.36■□□□□ 0.21
CHRNA3-205ENST00000559080 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
CHRNA3-205ENST00000559080 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
CHRNA3-205ENST00000559080 ABTB2Q8N961 1025 aa16.34■□□□□ 0.21
CHRNA3-205ENST00000559080 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
CHRNA3-205ENST00000559080 PPP1R1BQ9UD71 204 aaPredicted RBP16.34■□□□□ 0.21
CHRNA3-205ENST00000559080 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
CHRNA3-205ENST00000559080 MYOM1P52179 1685 aa16.34■□□□□ 0.21
CHRNA3-205ENST00000559080 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
CHRNA3-205ENST00000559080 OVOS2A0A0J9YW53 1432 aa16.33■□□□□ 0.2
CHRNA3-205ENST00000559080 OVOS2Q6IE36 1432 aa16.33■□□□□ 0.2
CHRNA3-205ENST00000559080 PLSCR1O15162 318 aa16.32■□□□□ 0.2
CHRNA3-205ENST00000559080 CRB1P82279 1406 aa16.32■□□□□ 0.2
CHRNA3-205ENST00000559080 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
CHRNA3-205ENST00000559080 GCP02774 474 aa16.31■□□□□ 0.2
CHRNA3-205ENST00000559080 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
CHRNA3-205ENST00000559080 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
CHRNA3-205ENST00000559080 PDGFDQ9GZP0 370 aaPredicted RBP16.3■□□□□ 0.2
CHRNA3-205ENST00000559080 SLIT3O75094 1523 aa16.29■□□□□ 0.2
CHRNA3-205ENST00000559080 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
CHRNA3-205ENST00000559080 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
CHRNA3-205ENST00000559080 PROM2Q8N271 834 aa16.28■□□□□ 0.2
CHRNA3-205ENST00000559080 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
CHRNA3-205ENST00000559080 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.19
CHRNA3-205ENST00000559080 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
CHRNA3-205ENST00000559080 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
CHRNA3-205ENST00000559080 PTGER2P43116 358 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms