RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NGDNQ8NEJ9 315 aaKnown RBP24.49■■□□□ 1.51
LRRC28-210ENST00000558879 ROCK2O75116 1388 aaKnown RBP24.48■■□□□ 1.51
LRRC28-210ENST00000558879 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
LRRC28-210ENST00000558879 UNC5CLQ8IV45 518 aa24.48■■□□□ 1.51
LRRC28-210ENST00000558879 HAP1P54257 671 aaPredicted RBP24.47■■□□□ 1.51
LRRC28-210ENST00000558879 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
LRRC28-210ENST00000558879 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
LRRC28-210ENST00000558879 PPIP5K1Q6PFW1 1433 aa24.46■■□□□ 1.51
LRRC28-210ENST00000558879 PLEKHG3A1L390 1219 aa24.46■■□□□ 1.51
LRRC28-210ENST00000558879 GJD4Q96KN9 370 aaPredicted RBP24.46■■□□□ 1.51
LRRC28-210ENST00000558879 ACEP12821 1306 aa24.44■■□□□ 1.5
LRRC28-210ENST00000558879 EP400Q96L91 3159 aa24.44■■□□□ 1.5
LRRC28-210ENST00000558879 NBPF8Q3BBV2 869 aa24.43■■□□□ 1.5
LRRC28-210ENST00000558879 MON2Q7Z3U7 1717 aa24.43■■□□□ 1.5
LRRC28-210ENST00000558879 PIK3C2AO00443 1686 aa24.43■■□□□ 1.5
LRRC28-210ENST00000558879 LMO7Q8WWI1 1683 aa24.43■■□□□ 1.5
LRRC28-210ENST00000558879 ATAD2Q6PL18 1390 aa24.42■■□□□ 1.5
LRRC28-210ENST00000558879 SBNO2Q9Y2G9 1366 aa24.41■■□□□ 1.5
LRRC28-210ENST00000558879 PLEKHG5O94827 1062 aa24.4■■□□□ 1.5
LRRC28-210ENST00000558879 VPS72Q15906 364 aa24.4■■□□□ 1.5
LRRC28-210ENST00000558879 THSD7AQ9UPZ6 1657 aa24.4■■□□□ 1.5
LRRC28-210ENST00000558879 FAM83GA6ND36 823 aa24.39■■□□□ 1.49
LRRC28-210ENST00000558879 PAK3O75914 559 aaPredicted RBP24.39■■□□□ 1.49
LRRC28-210ENST00000558879 SRPK2P78362 688 aaKnown RBP24.39■■□□□ 1.49
LRRC28-210ENST00000558879 TONSLQ96HA7 1378 aa24.39■■□□□ 1.49
LRRC28-210ENST00000558879 USP6P35125 1406 aa24.38■■□□□ 1.49
LRRC28-210ENST00000558879 CABP2Q9NPB3 220 aa24.38■■□□□ 1.49
LRRC28-210ENST00000558879 BRD4O60885 1362 aaPredicted RBP24.38■■□□□ 1.49
LRRC28-210ENST00000558879 USP54Q70EL1 1684 aa24.36■■□□□ 1.49
LRRC28-210ENST00000558879 USP19O94966 1318 aa24.35■■□□□ 1.49
LRRC28-210ENST00000558879 EVC2Q86UK5 1308 aa24.35■■□□□ 1.49
LRRC28-210ENST00000558879 SLIT3O75094 1523 aa24.35■■□□□ 1.49
LRRC28-210ENST00000558879 SSH2Q76I76 1423 aa24.35■■□□□ 1.49
LRRC28-210ENST00000558879 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
LRRC28-210ENST00000558879 BTG4Q9NY30 223 aa24.32■■□□□ 1.48
LRRC28-210ENST00000558879 COL18A1P39060 1754 aa24.3■■□□□ 1.48
LRRC28-210ENST00000558879 ONECUT3O60422 494 aaPredicted RBP24.3■■□□□ 1.48
LRRC28-210ENST00000558879 CPDO75976 1380 aa24.29■■□□□ 1.48
LRRC28-210ENST00000558879 WNK3Q9BYP7 1800 aa24.29■■□□□ 1.48
LRRC28-210ENST00000558879 PRDM11Q9NQV5 511 aa24.29■■□□□ 1.48
LRRC28-210ENST00000558879 CAMTA1Q9Y6Y1 1673 aa24.28■■□□□ 1.48
LRRC28-210ENST00000558879 CABP1Q9NZU7 370 aa24.28■■□□□ 1.48
LRRC28-210ENST00000558879 RGPD5Q99666 1765 aa24.28■■□□□ 1.48
LRRC28-210ENST00000558879 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
LRRC28-210ENST00000558879 NUTM2GQ5VZR2 741 aa24.27■■□□□ 1.48
LRRC28-210ENST00000558879 ABTB2Q8N961 1025 aa24.27■■□□□ 1.48
LRRC28-210ENST00000558879 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
LRRC28-210ENST00000558879 RGPD1P0DJD0 1748 aa24.26■■□□□ 1.47
LRRC28-210ENST00000558879 SEPT12Q8IYM1 358 aa24.25■■□□□ 1.47
LRRC28-210ENST00000558879 SPATA31A5Q5VU36 1347 aa24.25■■□□□ 1.47
LRRC28-210ENST00000558879 SPATA31A7Q8IWB4 1347 aa24.25■■□□□ 1.47
LRRC28-210ENST00000558879 CCDC9Q9Y3X0 531 aaKnown RBP24.24■■□□□ 1.47
LRRC28-210ENST00000558879 CD163L1Q9NR16 1453 aa24.24■■□□□ 1.47
LRRC28-210ENST00000558879 TNS1Q9HBL0 1735 aaKnown RBP24.24■■□□□ 1.47
LRRC28-210ENST00000558879 PARP4Q9UKK3 1724 aaKnown RBP24.23■■□□□ 1.47
LRRC28-210ENST00000558879 BLMP54132 1417 aaPredicted RBP24.22■■□□□ 1.47
LRRC28-210ENST00000558879 CHRNA2Q15822 529 aa24.22■■□□□ 1.47
LRRC28-210ENST00000558879 NLRP13Q86W25 1043 aa24.22■■□□□ 1.47
LRRC28-210ENST00000558879 ZC3H6P61129 1189 aaKnown RBP24.21■■□□□ 1.47
LRRC28-210ENST00000558879 LTN1O94822 1766 aa24.21■■□□□ 1.47
LRRC28-210ENST00000558879 COL5A2P05997 1499 aaPredicted RBP24.2■■□□□ 1.47
LRRC28-210ENST00000558879 NFAT5O94916 1531 aa24.2■■□□□ 1.46
LRRC28-210ENST00000558879 CCDC125Q86Z20 511 aa24.19■■□□□ 1.46
LRRC28-210ENST00000558879 SPATA31A1Q5TZJ5 1347 aa24.18■■□□□ 1.46
LRRC28-210ENST00000558879 GCP02774 474 aa24.18■■□□□ 1.46
LRRC28-210ENST00000558879 FAM98CQ17RN3 349 aaKnown RBP24.18■■□□□ 1.46
LRRC28-210ENST00000558879 ABCC6O95255 1503 aa24.17■■□□□ 1.46
LRRC28-210ENST00000558879 ZNF692Q9BU19 519 aaPredicted RBP24.17■■□□□ 1.46
LRRC28-210ENST00000558879 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
LRRC28-210ENST00000558879 TTC21AQ8NDW8 1320 aa24.16■■□□□ 1.46
LRRC28-210ENST00000558879 KRT27Q7Z3Y8 459 aa24.16■■□□□ 1.46
LRRC28-210ENST00000558879 KTN1Q86UP2 1357 aaKnown RBP24.15■■□□□ 1.46
LRRC28-210ENST00000558879 NLRP6P59044 892 aa24.14■■□□□ 1.45
LRRC28-210ENST00000558879 LRRC37A3O60309 1634 aa24.13■■□□□ 1.45
LRRC28-210ENST00000558879 STRN4Q9NRL3 753 aa24.13■■□□□ 1.45
LRRC28-210ENST00000558879 AATKQ6ZMQ8 1374 aa24.13■■□□□ 1.45
LRRC28-210ENST00000558879 TESK2Q96S53 571 aa24.12■■□□□ 1.45
LRRC28-210ENST00000558879 PUS7Q96PZ0 661 aaKnown RBP24.11■■□□□ 1.45
LRRC28-210ENST00000558879 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
LRRC28-210ENST00000558879 SBF2Q86WG5 1849 aa24.1■■□□□ 1.45
LRRC28-210ENST00000558879 A0A0G2JS52 829 aa24.1■■□□□ 1.45
LRRC28-210ENST00000558879 MYT1Q01538 1121 aa24.1■■□□□ 1.45
LRRC28-210ENST00000558879 MYOM1P52179 1685 aa24.1■■□□□ 1.45
LRRC28-210ENST00000558879 CRB1P82279 1406 aa24.1■■□□□ 1.45
LRRC28-210ENST00000558879 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
LRRC28-210ENST00000558879 USP31Q70CQ4 1352 aa24.09■■□□□ 1.45
LRRC28-210ENST00000558879 PEAK1Q9H792 1746 aa24.09■■□□□ 1.45
LRRC28-210ENST00000558879 A0A1W2PP64 1363 aa24.08■■□□□ 1.45
LRRC28-210ENST00000558879 NINLQ9Y2I6 1382 aa24.08■■□□□ 1.45
LRRC28-210ENST00000558879 LARP1Q6PKG0 1096 aaKnown RBP24.08■■□□□ 1.45
LRRC28-210ENST00000558879 BARGINQ6ZT62 677 aa24.08■■□□□ 1.45
LRRC28-210ENST00000558879 USP47Q96K76 1375 aa24.06■■□□□ 1.44
LRRC28-210ENST00000558879 ST20-MTHFSA0A0A6YYL1 179 aa24.06■■□□□ 1.44
LRRC28-210ENST00000558879 OVOS2A0A0J9YW53 1432 aa24.05■■□□□ 1.44
LRRC28-210ENST00000558879 OVOS2Q6IE36 1432 aa24.05■■□□□ 1.44
LRRC28-210ENST00000558879 KIF20BQ96Q89 1820 aa24.05■■□□□ 1.44
LRRC28-210ENST00000558879 RREB1Q92766 1687 aa24.05■■□□□ 1.44
LRRC28-210ENST00000558879 DISP2A7MBM2 1401 aa24.04■■□□□ 1.44
LRRC28-210ENST00000558879 EVA1CP58658 441 aa24.04■■□□□ 1.44
LRRC28-210ENST00000558879 KCNH5Q8NCM2 988 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms