RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 PRDM11Q9NQV5 511 aa23.46■■□□□ 1.35
CDC42BPB-203ENST00000558867 NRAPQ86VF7 1730 aa23.45■■□□□ 1.34
CDC42BPB-203ENST00000558867 SPATA31A5Q5VU36 1347 aa23.45■■□□□ 1.34
CDC42BPB-203ENST00000558867 SPATA31A7Q8IWB4 1347 aa23.45■■□□□ 1.34
CDC42BPB-203ENST00000558867 HRCP23327 699 aa23.45■■□□□ 1.34
CDC42BPB-203ENST00000558867 EN1Q05925 392 aaPredicted RBP23.44■■□□□ 1.34
CDC42BPB-203ENST00000558867 TRPM3Q9HCF6 1732 aaPredicted RBP23.44■■□□□ 1.34
CDC42BPB-203ENST00000558867 TULP4Q9NRJ4 1543 aa23.43■■□□□ 1.34
CDC42BPB-203ENST00000558867 RGPD1P0DJD0 1748 aa23.43■■□□□ 1.34
CDC42BPB-203ENST00000558867 PCGF6Q9BYE7 350 aa23.43■■□□□ 1.34
CDC42BPB-203ENST00000558867 ALS2Q96Q42 1657 aa23.42■■□□□ 1.34
CDC42BPB-203ENST00000558867 KDM2AQ9Y2K7 1162 aa23.42■■□□□ 1.34
CDC42BPB-203ENST00000558867 DCAF11Q8TEB1 546 aa23.41■■□□□ 1.34
CDC42BPB-203ENST00000558867 ADGRB1O14514 1584 aa23.4■■□□□ 1.34
CDC42BPB-203ENST00000558867 PRR36Q9H6K5 1346 aa23.39■■□□□ 1.34
CDC42BPB-203ENST00000558867 FAM196AQ6ZSG2 479 aa23.39■■□□□ 1.33
CDC42BPB-203ENST00000558867 DISP2A7MBM2 1401 aa23.37■■□□□ 1.33
CDC42BPB-203ENST00000558867 R3HDM1Q15032 1099 aaKnown RBP23.37■■□□□ 1.33
CDC42BPB-203ENST00000558867 FAM182BQ5T319 152 aa23.37■■□□□ 1.33
CDC42BPB-203ENST00000558867 SPATA31A1Q5TZJ5 1347 aa23.35■■□□□ 1.33
CDC42BPB-203ENST00000558867 EVA1CP58658 441 aa23.35■■□□□ 1.33
CDC42BPB-203ENST00000558867 NUDT16Q96DE0 195 aaKnown RBP23.35■■□□□ 1.33
CDC42BPB-203ENST00000558867 STRN4Q9NRL3 753 aa23.35■■□□□ 1.33
CDC42BPB-203ENST00000558867 ITSN1Q15811 1721 aa23.34■■□□□ 1.33
CDC42BPB-203ENST00000558867 KIAA0232Q92628 1395 aa23.34■■□□□ 1.33
CDC42BPB-203ENST00000558867 RAB3GAP2Q9H2M9 1393 aa23.34■■□□□ 1.33
CDC42BPB-203ENST00000558867 THSD7AQ9UPZ6 1657 aa23.33■■□□□ 1.33
CDC42BPB-203ENST00000558867 ATP7BP35670 1465 aa23.33■■□□□ 1.33
CDC42BPB-203ENST00000558867 PARD3Q8TEW0 1356 aa23.33■■□□□ 1.33
CDC42BPB-203ENST00000558867 PDE3BQ13370 1112 aa23.33■■□□□ 1.33
CDC42BPB-203ENST00000558867 EZH2Q15910 746 aaKnown RBP23.32■■□□□ 1.32
CDC42BPB-203ENST00000558867 TRIM37O94972 964 aa23.31■■□□□ 1.32
CDC42BPB-203ENST00000558867 APBA3O96018 575 aa23.31■■□□□ 1.32
CDC42BPB-203ENST00000558867 CHRNA2Q15822 529 aa23.31■■□□□ 1.32
CDC42BPB-203ENST00000558867 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
CDC42BPB-203ENST00000558867 CRYBG1Q9Y4K1 1723 aa23.3■■□□□ 1.32
CDC42BPB-203ENST00000558867 CAMKK2Q96RR4 588 aa23.29■■□□□ 1.32
CDC42BPB-203ENST00000558867 USP35Q9P2H5 1018 aa23.29■■□□□ 1.32
CDC42BPB-203ENST00000558867 NBPF8Q3BBV2 869 aa23.28■■□□□ 1.32
CDC42BPB-203ENST00000558867 NBPF14Q5TI25 921 aa23.28■■□□□ 1.32
CDC42BPB-203ENST00000558867 BARGINQ6ZT62 677 aa23.28■■□□□ 1.32
CDC42BPB-203ENST00000558867 CDK19Q9BWU1 502 aa23.28■■□□□ 1.32
CDC42BPB-203ENST00000558867 TNS1Q9HBL0 1735 aaKnown RBP23.28■■□□□ 1.32
CDC42BPB-203ENST00000558867 CCDC61Q9Y6R9 512 aa23.27■■□□□ 1.32
CDC42BPB-203ENST00000558867 C11orf95C9JLR9 678 aaPredicted RBP23.26■■□□□ 1.31
CDC42BPB-203ENST00000558867 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
CDC42BPB-203ENST00000558867 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
CDC42BPB-203ENST00000558867 ACEP12821 1306 aa23.25■■□□□ 1.31
CDC42BPB-203ENST00000558867 PHRF1Q9P1Y6 1649 aaKnown RBP23.24■■□□□ 1.31
CDC42BPB-203ENST00000558867 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
CDC42BPB-203ENST00000558867 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
CDC42BPB-203ENST00000558867 ARHGEF28Q8N1W1 1705 aaKnown RBP23.23■■□□□ 1.31
CDC42BPB-203ENST00000558867 THRAP3Q9Y2W1 955 aaKnown RBP23.23■■□□□ 1.31
CDC42BPB-203ENST00000558867 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
CDC42BPB-203ENST00000558867 PLEKHG3A1L390 1219 aa23.22■■□□□ 1.31
CDC42BPB-203ENST00000558867 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
CDC42BPB-203ENST00000558867 CPDO75976 1380 aa23.2■■□□□ 1.3
CDC42BPB-203ENST00000558867 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
CDC42BPB-203ENST00000558867 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
CDC42BPB-203ENST00000558867 PPP1R1BQ9UD71 204 aaPredicted RBP23.17■■□□□ 1.3
CDC42BPB-203ENST00000558867 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
CDC42BPB-203ENST00000558867 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
CDC42BPB-203ENST00000558867 GCP02774 474 aa23.15■■□□□ 1.3
CDC42BPB-203ENST00000558867 USP19O94966 1318 aa23.14■■□□□ 1.3
CDC42BPB-203ENST00000558867 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.29
CDC42BPB-203ENST00000558867 CAMTA1Q9Y6Y1 1673 aa23.14■■□□□ 1.29
CDC42BPB-203ENST00000558867 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
CDC42BPB-203ENST00000558867 NRKQ7Z2Y5 1582 aa23.13■■□□□ 1.29
CDC42BPB-203ENST00000558867 RREB1Q92766 1687 aa23.12■■□□□ 1.29
CDC42BPB-203ENST00000558867 KIAA1210Q9ULL0 1709 aa23.11■■□□□ 1.29
CDC42BPB-203ENST00000558867 PPIP5K1Q6PFW1 1433 aa23.1■■□□□ 1.29
CDC42BPB-203ENST00000558867 YY1P25490 414 aa23.1■■□□□ 1.29
CDC42BPB-203ENST00000558867 CRB1P82279 1406 aa23.09■■□□□ 1.29
CDC42BPB-203ENST00000558867 ZBTB7CA1YPR0 619 aa23.09■■□□□ 1.29
CDC42BPB-203ENST00000558867 KCNQ2O43526 872 aa23.09■■□□□ 1.29
CDC42BPB-203ENST00000558867 LMO7Q8WWI1 1683 aa23.09■■□□□ 1.29
CDC42BPB-203ENST00000558867 CENPJQ9HC77 1338 aaPredicted RBP23.08■■□□□ 1.29
CDC42BPB-203ENST00000558867 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.29
CDC42BPB-203ENST00000558867 OVOS2A0A0J9YW53 1432 aa23.08■■□□□ 1.29
CDC42BPB-203ENST00000558867 OVOS2Q6IE36 1432 aa23.08■■□□□ 1.29
CDC42BPB-203ENST00000558867 NUP188Q5SRE5 1749 aa23.08■■□□□ 1.29
CDC42BPB-203ENST00000558867 COL5A2P05997 1499 aaPredicted RBP23.07■■□□□ 1.28
CDC42BPB-203ENST00000558867 NLRP6P59044 892 aa23.07■■□□□ 1.28
CDC42BPB-203ENST00000558867 DDB1Q16531 1140 aa23.07■■□□□ 1.28
CDC42BPB-203ENST00000558867 PARP4Q9UKK3 1724 aaKnown RBP23.07■■□□□ 1.28
CDC42BPB-203ENST00000558867 PLSCR1O15162 318 aa23.05■■□□□ 1.28
CDC42BPB-203ENST00000558867 TOM1L2Q6ZVM7 507 aa23.05■■□□□ 1.28
CDC42BPB-203ENST00000558867 CABP2Q9NPB3 220 aa23.05■■□□□ 1.28
CDC42BPB-203ENST00000558867 AATKQ6ZMQ8 1374 aa23.04■■□□□ 1.28
CDC42BPB-203ENST00000558867 NINLQ9Y2I6 1382 aa23.04■■□□□ 1.28
CDC42BPB-203ENST00000558867 NBPF1Q3BBV0 1214 aa23.04■■□□□ 1.28
CDC42BPB-203ENST00000558867 CDCA7Q9BWT1 371 aaPredicted RBP23.04■■□□□ 1.28
CDC42BPB-203ENST00000558867 CABP1Q9NZU7 370 aa23.02■■□□□ 1.28
CDC42BPB-203ENST00000558867 BCL11BQ9C0K0 894 aaPredicted RBP23.01■■□□□ 1.27
CDC42BPB-203ENST00000558867 USP6P35125 1406 aa23■■□□□ 1.27
CDC42BPB-203ENST00000558867 KCNH5Q8NCM2 988 aa22.99■■□□□ 1.27
CDC42BPB-203ENST00000558867 RGPD3A6NKT7 1758 aaPredicted RBP22.99■■□□□ 1.27
CDC42BPB-203ENST00000558867 RGPD4Q7Z3J3 1758 aa22.99■■□□□ 1.27
CDC42BPB-203ENST00000558867 EVC2Q86UK5 1308 aa22.98■■□□□ 1.27
CDC42BPB-203ENST00000558867 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
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