RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 PLCG2P16885 1265 aa14.97□□□□□ -0.01
SPG11-212ENST00000558790 NUTM2AQ8IVF1 878 aaPredicted RBP14.97□□□□□ -0.01
SPG11-212ENST00000558790 COLQQ9Y215 455 aaPredicted RBP14.97□□□□□ -0.01
SPG11-212ENST00000558790 ADAMTS13Q76LX8 1427 aa14.97□□□□□ -0.01
SPG11-212ENST00000558790 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
SPG11-212ENST00000558790 PPP1R15AO75807 674 aaPredicted RBP14.96□□□□□ -0.01
SPG11-212ENST00000558790 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.01
SPG11-212ENST00000558790 TRPM2O94759 1503 aa14.96□□□□□ -0.02
SPG11-212ENST00000558790 SEC24BO95487 1268 aa14.95□□□□□ -0.02
SPG11-212ENST00000558790 SLC39A7Q92504 469 aa14.95□□□□□ -0.02
SPG11-212ENST00000558790 METRNQ9UJH8 293 aa14.93□□□□□ -0.02
SPG11-212ENST00000558790 NCOA3Q9Y6Q9 1424 aa14.92□□□□□ -0.02
SPG11-212ENST00000558790 NHSL1Q5SYE7 1610 aa14.92□□□□□ -0.02
SPG11-212ENST00000558790 POTEFA5A3E0 1075 aa14.92□□□□□ -0.02
SPG11-212ENST00000558790 ROCK1Q13464 1354 aa14.92□□□□□ -0.02
SPG11-212ENST00000558790 QTRT2Q9H974 415 aaKnown RBP14.91□□□□□ -0.02
SPG11-212ENST00000558790 NALCNQ8IZF0 1738 aa14.91□□□□□ -0.02
SPG11-212ENST00000558790 PIK3R4Q99570 1358 aa14.9□□□□□ -0.02
SPG11-212ENST00000558790 TBX22Q9Y458 520 aa14.9□□□□□ -0.02
SPG11-212ENST00000558790 PTPRUQ92729 1446 aa14.9□□□□□ -0.02
SPG11-212ENST00000558790 C7P10643 843 aa14.89□□□□□ -0.03
SPG11-212ENST00000558790 LRP5O75197 1615 aa14.88□□□□□ -0.03
SPG11-212ENST00000558790 ASXL1Q8IXJ9 1541 aa14.88□□□□□ -0.03
SPG11-212ENST00000558790 KIF1BO60333 1816 aa14.88□□□□□ -0.03
SPG11-212ENST00000558790 HDGFP51858 240 aaKnown RBP14.88□□□□□ -0.03
SPG11-212ENST00000558790 RBM6P78332 1123 aaKnown RBP14.88□□□□□ -0.03
SPG11-212ENST00000558790 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
SPG11-212ENST00000558790 MICALL2Q8IY33 904 aa14.88□□□□□ -0.03
SPG11-212ENST00000558790 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.88□□□□□ -0.03
SPG11-212ENST00000558790 CLTCL1P53675 1640 aa14.88□□□□□ -0.03
SPG11-212ENST00000558790 ATAD2Q6PL18 1390 aa14.87□□□□□ -0.03
SPG11-212ENST00000558790 DCCP43146 1447 aa14.86□□□□□ -0.03
SPG11-212ENST00000558790 C8orf37Q96NL8 207 aa14.86□□□□□ -0.03
SPG11-212ENST00000558790 NEXMIFQ5QGS0 1516 aa14.85□□□□□ -0.03
SPG11-212ENST00000558790 NUP155O75694 1391 aa14.85□□□□□ -0.03
SPG11-212ENST00000558790 BOLA1Q9Y3E2 137 aa14.84□□□□□ -0.03
SPG11-212ENST00000558790 ATF3P18847 181 aa14.83□□□□□ -0.04
SPG11-212ENST00000558790 C19orf44Q9H6X5 657 aa14.83□□□□□ -0.04
SPG11-212ENST00000558790 MST1RQ04912 1400 aa14.83□□□□□ -0.04
SPG11-212ENST00000558790 G3V3G9 751 aa14.81□□□□□ -0.04
SPG11-212ENST00000558790 BRINP3Q76B58 766 aa14.81□□□□□ -0.04
SPG11-212ENST00000558790 AMOTL2Q9Y2J4 779 aa14.81□□□□□ -0.04
SPG11-212ENST00000558790 WDR70Q9NW82 654 aa14.8□□□□□ -0.04
SPG11-212ENST00000558790 LAMC1P11047 1609 aa14.8□□□□□ -0.04
SPG11-212ENST00000558790 METP08581 1390 aa14.79□□□□□ -0.04
SPG11-212ENST00000558790 ITGAEP38570 1179 aa14.79□□□□□ -0.04
SPG11-212ENST00000558790 LARP6Q9BRS8 491 aaKnown RBP14.79□□□□□ -0.04
SPG11-212ENST00000558790 SETD5Q9C0A6 1442 aa14.79□□□□□ -0.04
SPG11-212ENST00000558790 CRISPLD2Q9H0B8 497 aa14.79□□□□□ -0.04
SPG11-212ENST00000558790 ADGRL3Q9HAR2 1447 aa14.79□□□□□ -0.04
SPG11-212ENST00000558790 PPLO60437 1756 aa14.78□□□□□ -0.04
SPG11-212ENST00000558790 DDX17Q92841 729 aaKnown RBP14.78□□□□□ -0.04
SPG11-212ENST00000558790 L3MBTL3Q96JM7 780 aaPredicted RBP14.78□□□□□ -0.04
SPG11-212ENST00000558790 TMEM121BQ9BXQ6 578 aaPredicted RBP14.78□□□□□ -0.04
SPG11-212ENST00000558790 PDE4AP27815 886 aa14.76□□□□□ -0.05
SPG11-212ENST00000558790 PNPLA6Q8IY17 1366 aa14.75□□□□□ -0.05
SPG11-212ENST00000558790 ADAMTS2O95450 1211 aa14.75□□□□□ -0.05
SPG11-212ENST00000558790 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
SPG11-212ENST00000558790 ZNF326Q5BKZ1 582 aaKnown RBP14.74□□□□□ -0.05
SPG11-212ENST00000558790 MARF1Q9Y4F3 1742 aaKnown RBP14.73□□□□□ -0.05
SPG11-212ENST00000558790 DEFB132Q7Z7B7 95 aa14.73□□□□□ -0.05
SPG11-212ENST00000558790 NGLY1Q96IV0 654 aa14.73□□□□□ -0.05
SPG11-212ENST00000558790 PTCH1Q13635 1447 aa14.73□□□□□ -0.05
SPG11-212ENST00000558790 COL22A1Q8NFW1 1626 aaPredicted RBP14.71□□□□□ -0.05
SPG11-212ENST00000558790 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
SPG11-212ENST00000558790 ATRNO75882 1429 aa14.71□□□□□ -0.05
SPG11-212ENST00000558790 C1orf167Q5SNV9 1468 aa14.7□□□□□ -0.06
SPG11-212ENST00000558790 NAIPQ13075 1403 aa14.7□□□□□ -0.06
SPG11-212ENST00000558790 PSDA5PKW4 1024 aaPredicted RBP14.7□□□□□ -0.06
SPG11-212ENST00000558790 DDX27Q96GQ7 796 aaKnown RBP14.7□□□□□ -0.06
SPG11-212ENST00000558790 USP21Q9UK80 565 aa14.7□□□□□ -0.06
SPG11-212ENST00000558790 IFT172Q9UG01 1749 aa14.69□□□□□ -0.06
SPG11-212ENST00000558790 PRAG1Q86YV5 1406 aa14.69□□□□□ -0.06
SPG11-212ENST00000558790 RRBP1Q9P2E9 1410 aaKnown RBP14.69□□□□□ -0.06
SPG11-212ENST00000558790 MFSD10Q14728 455 aa14.69□□□□□ -0.06
SPG11-212ENST00000558790 KCNV2Q8TDN2 545 aa14.69□□□□□ -0.06
SPG11-212ENST00000558790 TMEM92Q6UXU6 159 aa14.68□□□□□ -0.06
SPG11-212ENST00000558790 TMC2Q8TDI7 906 aa14.68□□□□□ -0.06
SPG11-212ENST00000558790 GPHNQ9NQX3 736 aaPredicted RBP14.68□□□□□ -0.06
SPG11-212ENST00000558790 BCL9LQ86UU0 1499 aa14.68□□□□□ -0.06
SPG11-212ENST00000558790 CDC42BPGQ6DT37 1551 aa14.68□□□□□ -0.06
SPG11-212ENST00000558790 CCDC125Q86Z20 511 aa14.67□□□□□ -0.06
SPG11-212ENST00000558790 LRRC59Q96AG4 307 aaKnown RBP14.67□□□□□ -0.06
SPG11-212ENST00000558790 ROBO2Q9HCK4 1378 aa14.67□□□□□ -0.06
SPG11-212ENST00000558790 C2orf72A6NCS6 295 aa14.66□□□□□ -0.06
SPG11-212ENST00000558790 TRPC5Q9UL62 973 aaPredicted RBP14.66□□□□□ -0.06
SPG11-212ENST00000558790 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
SPG11-212ENST00000558790 HRCP23327 699 aa14.65□□□□□ -0.06
SPG11-212ENST00000558790 BLMP54132 1417 aaPredicted RBP14.65□□□□□ -0.06
SPG11-212ENST00000558790 DSG2Q14126 1118 aa14.64□□□□□ -0.07
SPG11-212ENST00000558790 PPP1R15BQ5SWA1 713 aa14.64□□□□□ -0.07
SPG11-212ENST00000558790 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
SPG11-212ENST00000558790 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
SPG11-212ENST00000558790 YY1P25490 414 aa14.63□□□□□ -0.07
SPG11-212ENST00000558790 E2F4Q16254 413 aa14.63□□□□□ -0.07
SPG11-212ENST00000558790 FNBP4Q8N3X1 1017 aaPredicted RBP14.63□□□□□ -0.07
SPG11-212ENST00000558790 HFM1A2PYH4 1435 aa14.63□□□□□ -0.07
SPG11-212ENST00000558790 GLI3P10071 1580 aa14.63□□□□□ -0.07
SPG11-212ENST00000558790 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.63□□□□□ -0.07
SPG11-212ENST00000558790 IFFO2Q5TF58 517 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms