RNA–Protein interactions for RNA: ENST00000558621.2

LINC02254-201, Transcript of long intergenic non-protein coding RNA 2254, humanhuman

TSL 1 (best) BASIC

Gene LINC02254, Length 1,726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02254-201ENST00000558621 AKAP12Q02952 1782 aa13.19□□□□□ -0.3
LINC02254-201ENST00000558621 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
LINC02254-201ENST00000558621 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
LINC02254-201ENST00000558621 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
LINC02254-201ENST00000558621 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
LINC02254-201ENST00000558621 FNBP4Q8N3X1 1017 aaPredicted RBP13.19□□□□□ -0.3
LINC02254-201ENST00000558621 PLEKHG3A1L390 1219 aa13.18□□□□□ -0.3
LINC02254-201ENST00000558621 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
LINC02254-201ENST00000558621 TRPC5Q9UL62 973 aaPredicted RBP13.18□□□□□ -0.3
LINC02254-201ENST00000558621 NWD2Q9ULI1 1742 aa13.18□□□□□ -0.3
LINC02254-201ENST00000558621 BCL9LQ86UU0 1499 aa13.17□□□□□ -0.3
LINC02254-201ENST00000558621 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
LINC02254-201ENST00000558621 RGS12O14924 1447 aa13.15□□□□□ -0.3
LINC02254-201ENST00000558621 COL14A1Q05707 1796 aaKnown RBP13.15□□□□□ -0.3
LINC02254-201ENST00000558621 SLIT2O94813 1529 aa13.15□□□□□ -0.3
LINC02254-201ENST00000558621 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
LINC02254-201ENST00000558621 ATRNO75882 1429 aa13.15□□□□□ -0.3
LINC02254-201ENST00000558621 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
LINC02254-201ENST00000558621 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
LINC02254-201ENST00000558621 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
LINC02254-201ENST00000558621 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
LINC02254-201ENST00000558621 BRWD3Q6RI45 1802 aa13.14□□□□□ -0.31
LINC02254-201ENST00000558621 FAM83GA6ND36 823 aa13.13□□□□□ -0.31
LINC02254-201ENST00000558621 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
LINC02254-201ENST00000558621 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
LINC02254-201ENST00000558621 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
LINC02254-201ENST00000558621 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
LINC02254-201ENST00000558621 USP6P35125 1406 aa13.13□□□□□ -0.31
LINC02254-201ENST00000558621 PIK3C2AO00443 1686 aa13.13□□□□□ -0.31
LINC02254-201ENST00000558621 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
LINC02254-201ENST00000558621 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
LINC02254-201ENST00000558621 GLI3P10071 1580 aa13.12□□□□□ -0.31
LINC02254-201ENST00000558621 PRDM11Q9NQV5 511 aa13.12□□□□□ -0.31
LINC02254-201ENST00000558621 BTG4Q9NY30 223 aa13.12□□□□□ -0.31
LINC02254-201ENST00000558621 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
LINC02254-201ENST00000558621 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
LINC02254-201ENST00000558621 CHRNA2Q15822 529 aa13.11□□□□□ -0.31
LINC02254-201ENST00000558621 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
LINC02254-201ENST00000558621 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
LINC02254-201ENST00000558621 USP47Q96K76 1375 aa13.11□□□□□ -0.31
LINC02254-201ENST00000558621 EP400Q96L91 3159 aa13.11□□□□□ -0.31
LINC02254-201ENST00000558621 RGPD5Q99666 1765 aa13.1□□□□□ -0.31
LINC02254-201ENST00000558621 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
LINC02254-201ENST00000558621 NLRP6P59044 892 aa13.1□□□□□ -0.31
LINC02254-201ENST00000558621 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
LINC02254-201ENST00000558621 TIMELESSQ9UNS1 1208 aa13.09□□□□□ -0.31
LINC02254-201ENST00000558621 A0A0G2JS52 829 aa13.08□□□□□ -0.32
LINC02254-201ENST00000558621 SOX12O15370 315 aa13.08□□□□□ -0.32
LINC02254-201ENST00000558621 MYT1Q01538 1121 aa13.08□□□□□ -0.32
LINC02254-201ENST00000558621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC02254-201ENST00000558621 TESK2Q96S53 571 aa13.08□□□□□ -0.32
LINC02254-201ENST00000558621 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
LINC02254-201ENST00000558621 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
LINC02254-201ENST00000558621 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
LINC02254-201ENST00000558621 TTC21BQ7Z4L5 1316 aa13.07□□□□□ -0.32
LINC02254-201ENST00000558621 BRD4O60885 1362 aaPredicted RBP13.07□□□□□ -0.32
LINC02254-201ENST00000558621 GCP02774 474 aa13.07□□□□□ -0.32
LINC02254-201ENST00000558621 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
LINC02254-201ENST00000558621 VPS72Q15906 364 aa13.07□□□□□ -0.32
LINC02254-201ENST00000558621 USP19O94966 1318 aa13.07□□□□□ -0.32
LINC02254-201ENST00000558621 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
LINC02254-201ENST00000558621 HDGFL2Q7Z4V5 671 aaPredicted RBP13.06□□□□□ -0.32
LINC02254-201ENST00000558621 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC02254-201ENST00000558621 CD163L1Q9NR16 1453 aa13.05□□□□□ -0.32
LINC02254-201ENST00000558621 LTN1O94822 1766 aa13.05□□□□□ -0.32
LINC02254-201ENST00000558621 TMF1P82094 1093 aa13.05□□□□□ -0.32
LINC02254-201ENST00000558621 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
LINC02254-201ENST00000558621 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 SLIT3O75094 1523 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 EVA1CP58658 441 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 TTC21AQ8NDW8 1320 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 CAMTA1Q9Y6Y1 1673 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
LINC02254-201ENST00000558621 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
LINC02254-201ENST00000558621 SLC24A1O60721 1099 aa13.02□□□□□ -0.32
LINC02254-201ENST00000558621 NME9Q86XW9 330 aa13.02□□□□□ -0.32
LINC02254-201ENST00000558621 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.32
LINC02254-201ENST00000558621 COL18A1P39060 1754 aa13.02□□□□□ -0.33
LINC02254-201ENST00000558621 MYOM1P52179 1685 aa13.01□□□□□ -0.33
LINC02254-201ENST00000558621 PUS7Q96PZ0 661 aaKnown RBP13.01□□□□□ -0.33
LINC02254-201ENST00000558621 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
LINC02254-201ENST00000558621 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
LINC02254-201ENST00000558621 CPDO75976 1380 aa13.01□□□□□ -0.33
LINC02254-201ENST00000558621 EDC4Q6P2E9 1401 aaKnown RBP13.01□□□□□ -0.33
LINC02254-201ENST00000558621 USP54Q70EL1 1684 aa13□□□□□ -0.33
LINC02254-201ENST00000558621 KIF20BQ96Q89 1820 aa13□□□□□ -0.33
LINC02254-201ENST00000558621 LARP1Q6PKG0 1096 aaKnown RBP12.99□□□□□ -0.33
LINC02254-201ENST00000558621 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
LINC02254-201ENST00000558621 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
LINC02254-201ENST00000558621 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
LINC02254-201ENST00000558621 NFAT5O94916 1531 aa12.98□□□□□ -0.33
LINC02254-201ENST00000558621 COL5A2P05997 1499 aaPredicted RBP12.98□□□□□ -0.33
LINC02254-201ENST00000558621 THSD7AQ9UPZ6 1657 aa12.98□□□□□ -0.33
LINC02254-201ENST00000558621 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
LINC02254-201ENST00000558621 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
LINC02254-201ENST00000558621 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
LINC02254-201ENST00000558621 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms