RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
LINC01220-201ENST00000558575 COL14A1Q05707 1796 aaKnown RBP22.21■■□□□ 1.15
LINC01220-201ENST00000558575 HAP1P54257 671 aaPredicted RBP22.21■■□□□ 1.15
LINC01220-201ENST00000558575 FAM98CQ17RN3 349 aaKnown RBP22.21■■□□□ 1.15
LINC01220-201ENST00000558575 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
LINC01220-201ENST00000558575 ADGRB2O60241 1585 aa22.2■■□□□ 1.14
LINC01220-201ENST00000558575 TRPM3Q9HCF6 1732 aaPredicted RBP22.2■■□□□ 1.14
LINC01220-201ENST00000558575 CRYBG1Q9Y4K1 1723 aa22.2■■□□□ 1.14
LINC01220-201ENST00000558575 EZH2Q15910 746 aaKnown RBP22.19■■□□□ 1.14
LINC01220-201ENST00000558575 CAMTA1Q9Y6Y1 1673 aa22.19■■□□□ 1.14
LINC01220-201ENST00000558575 FAM83GA6ND36 823 aa22.18■■□□□ 1.14
LINC01220-201ENST00000558575 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
LINC01220-201ENST00000558575 KIAA1210Q9ULL0 1709 aa22.15■■□□□ 1.14
LINC01220-201ENST00000558575 PRAM1Q96QH2 718 aa22.15■■□□□ 1.14
LINC01220-201ENST00000558575 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
LINC01220-201ENST00000558575 CAMKK2Q96RR4 588 aa22.13■■□□□ 1.13
LINC01220-201ENST00000558575 DLC1Q96QB1 1528 aa22.11■■□□□ 1.13
LINC01220-201ENST00000558575 TRPM1Q7Z4N2 1603 aa22.11■■□□□ 1.13
LINC01220-201ENST00000558575 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
LINC01220-201ENST00000558575 BTG4Q9NY30 223 aa22.11■■□□□ 1.13
LINC01220-201ENST00000558575 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
LINC01220-201ENST00000558575 ARHGEF10O15013 1369 aa22.11■■□□□ 1.13
LINC01220-201ENST00000558575 GPRASP1Q5JY77 1395 aa22.11■■□□□ 1.13
LINC01220-201ENST00000558575 LMOD2Q6P5Q4 547 aa22.1■■□□□ 1.13
LINC01220-201ENST00000558575 POGKQ9P215 609 aa22.1■■□□□ 1.13
LINC01220-201ENST00000558575 ROCK2O75116 1388 aaKnown RBP22.1■■□□□ 1.13
LINC01220-201ENST00000558575 PSME1Q06323 249 aa22.09■■□□□ 1.13
LINC01220-201ENST00000558575 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
LINC01220-201ENST00000558575 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
LINC01220-201ENST00000558575 TRIM37O94972 964 aa22.05■■□□□ 1.12
LINC01220-201ENST00000558575 CARD11Q9BXL7 1154 aa22.05■■□□□ 1.12
LINC01220-201ENST00000558575 PARD3Q8TEW0 1356 aa22.04■■□□□ 1.12
LINC01220-201ENST00000558575 MINK1Q8N4C8 1332 aaPredicted RBP22.03■■□□□ 1.12
LINC01220-201ENST00000558575 HIRIP3Q9BW71 556 aaPredicted RBP22.02■■□□□ 1.12
LINC01220-201ENST00000558575 CHD4Q14839 1912 aa22.01■■□□□ 1.11
LINC01220-201ENST00000558575 NINLQ9Y2I6 1382 aa22■■□□□ 1.11
LINC01220-201ENST00000558575 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
LINC01220-201ENST00000558575 CASZ1Q86V15 1759 aa22■■□□□ 1.11
LINC01220-201ENST00000558575 PHRF1Q9P1Y6 1649 aaKnown RBP22■■□□□ 1.11
LINC01220-201ENST00000558575 APBA3O96018 575 aa22■■□□□ 1.11
LINC01220-201ENST00000558575 CENPJQ9HC77 1338 aaPredicted RBP22■■□□□ 1.11
LINC01220-201ENST00000558575 PMFBP1Q8TBY8 1022 aa21.98■■□□□ 1.11
LINC01220-201ENST00000558575 WASLO00401 505 aaPredicted RBP21.97■■□□□ 1.11
LINC01220-201ENST00000558575 FAM196AQ6ZSG2 479 aa21.97■■□□□ 1.11
LINC01220-201ENST00000558575 NRKQ7Z2Y5 1582 aa21.96■■□□□ 1.11
LINC01220-201ENST00000558575 SPON1Q9HCB6 807 aa21.96■■□□□ 1.11
LINC01220-201ENST00000558575 PPP1R1BQ9UD71 204 aaPredicted RBP21.96■■□□□ 1.11
LINC01220-201ENST00000558575 SPATA31A1Q5TZJ5 1347 aa21.96■■□□□ 1.11
LINC01220-201ENST00000558575 SBF2Q86WG5 1849 aa21.96■■□□□ 1.11
LINC01220-201ENST00000558575 ANKARQ7Z5J8 1434 aa21.96■■□□□ 1.11
LINC01220-201ENST00000558575 MYOM1P52179 1685 aa21.95■■□□□ 1.1
LINC01220-201ENST00000558575 RGPD3A6NKT7 1758 aaPredicted RBP21.95■■□□□ 1.1
LINC01220-201ENST00000558575 RGPD4Q7Z3J3 1758 aa21.95■■□□□ 1.1
LINC01220-201ENST00000558575 KCNQ2O43526 872 aa21.93■■□□□ 1.1
LINC01220-201ENST00000558575 CDK19Q9BWU1 502 aa21.93■■□□□ 1.1
LINC01220-201ENST00000558575 PRR36Q9H6K5 1346 aa21.92■■□□□ 1.1
LINC01220-201ENST00000558575 ST20-MTHFSA0A0A6YYL1 179 aa21.91■■□□□ 1.1
LINC01220-201ENST00000558575 DCAF8L1A6NGE4 600 aa21.91■■□□□ 1.1
LINC01220-201ENST00000558575 NBPF14Q5TI25 921 aa21.91■■□□□ 1.1
LINC01220-201ENST00000558575 ZNF784Q8NCA9 323 aaPredicted RBP21.91■■□□□ 1.1
LINC01220-201ENST00000558575 EIF3AQ14152 1382 aaKnown RBP21.9■■□□□ 1.1
LINC01220-201ENST00000558575 PARP4Q9UKK3 1724 aaKnown RBP21.9■■□□□ 1.1
LINC01220-201ENST00000558575 TESK2Q96S53 571 aa21.89■■□□□ 1.09
LINC01220-201ENST00000558575 PRDM11Q9NQV5 511 aa21.89■■□□□ 1.09
LINC01220-201ENST00000558575 PEAK1Q9H792 1746 aa21.89■■□□□ 1.09
LINC01220-201ENST00000558575 USP47Q96K76 1375 aa21.88■■□□□ 1.09
LINC01220-201ENST00000558575 SENP3-EIF4A1A0A087X0R7 540 aa21.88■■□□□ 1.09
LINC01220-201ENST00000558575 UTRNP46939 3433 aa21.88■■□□□ 1.09
LINC01220-201ENST00000558575 KIAA0232Q92628 1395 aa21.87■■□□□ 1.09
LINC01220-201ENST00000558575 IFFO2Q5TF58 517 aa21.87■■□□□ 1.09
LINC01220-201ENST00000558575 NUDT16Q96DE0 195 aaKnown RBP21.87■■□□□ 1.09
LINC01220-201ENST00000558575 ITSN1Q15811 1721 aa21.86■■□□□ 1.09
LINC01220-201ENST00000558575 CHRNA2Q15822 529 aa21.86■■□□□ 1.09
LINC01220-201ENST00000558575 CABP2Q9NPB3 220 aa21.86■■□□□ 1.09
LINC01220-201ENST00000558575 LMO7Q8WWI1 1683 aa21.85■■□□□ 1.09
LINC01220-201ENST00000558575 STRN4Q9NRL3 753 aa21.85■■□□□ 1.09
LINC01220-201ENST00000558575 SBNO2Q9Y2G9 1366 aa21.85■■□□□ 1.09
LINC01220-201ENST00000558575 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
LINC01220-201ENST00000558575 QRICH2Q9H0J4 1663 aa21.84■■□□□ 1.09
LINC01220-201ENST00000558575 USP35Q9P2H5 1018 aa21.83■■□□□ 1.09
LINC01220-201ENST00000558575 EVC2Q86UK5 1308 aa21.82■■□□□ 1.08
LINC01220-201ENST00000558575 SSH2Q76I76 1423 aa21.82■■□□□ 1.08
LINC01220-201ENST00000558575 SRPK2P78362 688 aaKnown RBP21.82■■□□□ 1.08
LINC01220-201ENST00000558575 PDE3BQ13370 1112 aa21.82■■□□□ 1.08
LINC01220-201ENST00000558575 BARGINQ6ZT62 677 aa21.81■■□□□ 1.08
LINC01220-201ENST00000558575 ANO8Q9HCE9 1232 aaPredicted RBP21.81■■□□□ 1.08
LINC01220-201ENST00000558575 ATP7BP35670 1465 aa21.81■■□□□ 1.08
LINC01220-201ENST00000558575 HSPA5P11021 654 aaKnown RBP21.8■■□□□ 1.08
LINC01220-201ENST00000558575 PDGFDQ9GZP0 370 aaPredicted RBP21.8■■□□□ 1.08
LINC01220-201ENST00000558575 CCDC61Q9Y6R9 512 aa21.8■■□□□ 1.08
LINC01220-201ENST00000558575 WNK3Q9BYP7 1800 aa21.79■■□□□ 1.08
LINC01220-201ENST00000558575 C1QTNF8P60827 252 aa21.79■■□□□ 1.08
LINC01220-201ENST00000558575 LRRC37A3O60309 1634 aa21.79■■□□□ 1.08
LINC01220-201ENST00000558575 PAK3O75914 559 aaPredicted RBP21.78■■□□□ 1.08
LINC01220-201ENST00000558575 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
LINC01220-201ENST00000558575 PLEKHG3A1L390 1219 aa21.77■■□□□ 1.08
LINC01220-201ENST00000558575 ZC3H6P61129 1189 aaKnown RBP21.77■■□□□ 1.08
LINC01220-201ENST00000558575 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
LINC01220-201ENST00000558575 LARP1Q6PKG0 1096 aaKnown RBP21.75■■□□□ 1.07
LINC01220-201ENST00000558575 CABP1Q9NZU7 370 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms