RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 XPCQ01831 940 aaPredicted RBP11.03□□□□□ -0.64
RTF1-205ENST00000558298 TESK2Q96S53 571 aa11.03□□□□□ -0.64
RTF1-205ENST00000558298 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
RTF1-205ENST00000558298 PLCH1Q4KWH8 1693 aa11.03□□□□□ -0.64
RTF1-205ENST00000558298 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
RTF1-205ENST00000558298 SLIT2O94813 1529 aa11.03□□□□□ -0.64
RTF1-205ENST00000558298 PHRF1Q9P1Y6 1649 aaKnown RBP11.02□□□□□ -0.64
RTF1-205ENST00000558298 BCL9LQ86UU0 1499 aa11.02□□□□□ -0.65
RTF1-205ENST00000558298 NRAPQ86VF7 1730 aa11.02□□□□□ -0.65
RTF1-205ENST00000558298 ZNF772Q68DY9 489 aaPredicted RBP11.02□□□□□ -0.65
RTF1-205ENST00000558298 AFF2P51816 1311 aa11.02□□□□□ -0.65
RTF1-205ENST00000558298 ATRNO75882 1429 aa11.01□□□□□ -0.65
RTF1-205ENST00000558298 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
RTF1-205ENST00000558298 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
RTF1-205ENST00000558298 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
RTF1-205ENST00000558298 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
RTF1-205ENST00000558298 FNBP4Q8N3X1 1017 aaPredicted RBP11.01□□□□□ -0.65
RTF1-205ENST00000558298 CDK19Q9BWU1 502 aa11.01□□□□□ -0.65
RTF1-205ENST00000558298 ARHGEF10O15013 1369 aa11.01□□□□□ -0.65
RTF1-205ENST00000558298 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
RTF1-205ENST00000558298 PPIP5K1Q6PFW1 1433 aa11.01□□□□□ -0.65
RTF1-205ENST00000558298 SSH2Q76I76 1423 aa11.01□□□□□ -0.65
RTF1-205ENST00000558298 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
RTF1-205ENST00000558298 MYOM1P52179 1685 aa11□□□□□ -0.65
RTF1-205ENST00000558298 RGS12O14924 1447 aa11□□□□□ -0.65
RTF1-205ENST00000558298 MEX3CQ5U5Q3 659 aaKnown RBP10.99□□□□□ -0.65
RTF1-205ENST00000558298 PMFBP1Q8TBY8 1022 aa10.99□□□□□ -0.65
RTF1-205ENST00000558298 USP6P35125 1406 aa10.99□□□□□ -0.65
RTF1-205ENST00000558298 GLI3P10071 1580 aa10.99□□□□□ -0.65
RTF1-205ENST00000558298 PSME1Q06323 249 aa10.98□□□□□ -0.65
RTF1-205ENST00000558298 ERICH6BQ5W0A0 696 aa10.98□□□□□ -0.65
RTF1-205ENST00000558298 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
RTF1-205ENST00000558298 FANCIQ9NVI1 1328 aa10.98□□□□□ -0.65
RTF1-205ENST00000558298 CD163L1Q9NR16 1453 aa10.98□□□□□ -0.65
RTF1-205ENST00000558298 COL14A1Q05707 1796 aaKnown RBP10.98□□□□□ -0.65
RTF1-205ENST00000558298 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
RTF1-205ENST00000558298 PIK3C2AO00443 1686 aa10.97□□□□□ -0.65
RTF1-205ENST00000558298 ADAMTS2O95450 1211 aa10.96□□□□□ -0.65
RTF1-205ENST00000558298 LMO7Q8WWI1 1683 aa10.95□□□□□ -0.66
RTF1-205ENST00000558298 SLIT3O75094 1523 aa10.95□□□□□ -0.66
RTF1-205ENST00000558298 ABCC6O95255 1503 aa10.95□□□□□ -0.66
RTF1-205ENST00000558298 ACEP12821 1306 aa10.95□□□□□ -0.66
RTF1-205ENST00000558298 SRPK2P78362 688 aaKnown RBP10.95□□□□□ -0.66
RTF1-205ENST00000558298 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
RTF1-205ENST00000558298 USP19O94966 1318 aa10.94□□□□□ -0.66
RTF1-205ENST00000558298 RBM6P78332 1123 aaKnown RBP10.94□□□□□ -0.66
RTF1-205ENST00000558298 TMF1P82094 1093 aa10.94□□□□□ -0.66
RTF1-205ENST00000558298 NGLY1Q96IV0 654 aa10.94□□□□□ -0.66
RTF1-205ENST00000558298 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
RTF1-205ENST00000558298 CABP2Q9NPB3 220 aa10.94□□□□□ -0.66
RTF1-205ENST00000558298 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
RTF1-205ENST00000558298 ANKRD36BQ8N2N9 1353 aa10.93□□□□□ -0.66
RTF1-205ENST00000558298 RXRBP28702 533 aa10.93□□□□□ -0.66
RTF1-205ENST00000558298 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
RTF1-205ENST00000558298 CABLES1Q8TDN4 633 aa10.93□□□□□ -0.66
RTF1-205ENST00000558298 USP21Q9UK80 565 aa10.93□□□□□ -0.66
RTF1-205ENST00000558298 TTC21AQ8NDW8 1320 aa10.92□□□□□ -0.66
RTF1-205ENST00000558298 NGDNQ8NEJ9 315 aaKnown RBP10.92□□□□□ -0.66
RTF1-205ENST00000558298 QTRT2Q9H974 415 aaKnown RBP10.92□□□□□ -0.66
RTF1-205ENST00000558298 TRPC5Q9UL62 973 aaPredicted RBP10.92□□□□□ -0.66
RTF1-205ENST00000558298 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
RTF1-205ENST00000558298 EP400Q96L91 3159 aa10.91□□□□□ -0.66
RTF1-205ENST00000558298 USP31Q70CQ4 1352 aa10.91□□□□□ -0.66
RTF1-205ENST00000558298 CABP1Q9NZU7 370 aa10.91□□□□□ -0.66
RTF1-205ENST00000558298 BRWD3Q6RI45 1802 aa10.91□□□□□ -0.66
RTF1-205ENST00000558298 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
RTF1-205ENST00000558298 CPDO75976 1380 aa10.9□□□□□ -0.66
RTF1-205ENST00000558298 COL18A1P39060 1754 aa10.9□□□□□ -0.66
RTF1-205ENST00000558298 UNC5CLQ8IV45 518 aa10.9□□□□□ -0.66
RTF1-205ENST00000558298 KIF20BQ96Q89 1820 aa10.89□□□□□ -0.67
RTF1-205ENST00000558298 FAM83GA6ND36 823 aa10.89□□□□□ -0.67
RTF1-205ENST00000558298 OVOS2A0A0J9YW53 1432 aa10.89□□□□□ -0.67
RTF1-205ENST00000558298 OVOS2Q6IE36 1432 aa10.89□□□□□ -0.67
RTF1-205ENST00000558298 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
RTF1-205ENST00000558298 KTN1Q86UP2 1357 aaKnown RBP10.89□□□□□ -0.67
RTF1-205ENST00000558298 NFAT5O94916 1531 aa10.89□□□□□ -0.67
RTF1-205ENST00000558298 VPS72Q15906 364 aa10.88□□□□□ -0.67
RTF1-205ENST00000558298 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
RTF1-205ENST00000558298 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
RTF1-205ENST00000558298 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
RTF1-205ENST00000558298 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
RTF1-205ENST00000558298 KIAA0232Q92628 1395 aa10.88□□□□□ -0.67
RTF1-205ENST00000558298 CCER2I3L3R5 266 aa10.87□□□□□ -0.67
RTF1-205ENST00000558298 ONECUT3O60422 494 aaPredicted RBP10.87□□□□□ -0.67
RTF1-205ENST00000558298 HSPA5P11021 654 aaKnown RBP10.87□□□□□ -0.67
RTF1-205ENST00000558298 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
RTF1-205ENST00000558298 TTC21BQ7Z4L5 1316 aa10.86□□□□□ -0.67
RTF1-205ENST00000558298 LMOD2Q6P5Q4 547 aa10.86□□□□□ -0.67
RTF1-205ENST00000558298 HDGFL2Q7Z4V5 671 aaPredicted RBP10.86□□□□□ -0.67
RTF1-205ENST00000558298 UPF1Q92900 1129 aaKnown RBP eCLIP10.86□□□□□ -0.67
RTF1-205ENST00000558298 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
RTF1-205ENST00000558298 NLRP13Q86W25 1043 aa10.85□□□□□ -0.67
RTF1-205ENST00000558298 WNK3Q9BYP7 1800 aa10.85□□□□□ -0.67
RTF1-205ENST00000558298 ABTB2Q8N961 1025 aa10.84□□□□□ -0.67
RTF1-205ENST00000558298 SLC12A5Q9H2X9 1139 aa10.84□□□□□ -0.67
RTF1-205ENST00000558298 COL5A2P05997 1499 aaPredicted RBP10.84□□□□□ -0.67
RTF1-205ENST00000558298 FAM208AQ9UK61 1670 aaKnown RBP10.84□□□□□ -0.67
RTF1-205ENST00000558298 LTN1O94822 1766 aa10.84□□□□□ -0.67
RTF1-205ENST00000558298 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
RTF1-205ENST00000558298 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms