RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 PPFIBP1Q86W92 1011 aa13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 CEP57L1Q8IYX8 460 aa13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 ZNHIT6Q9NWK9 470 aaKnown RBP13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 OFD1O75665 1012 aa13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 IVLP07476 585 aa13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 AKNAQ7Z591 1439 aa13.97□□□□□ -0.17
CSPG4P12-201ENST00000558282 ZSCAN12O43309 604 aa13.96□□□□□ -0.17
CSPG4P12-201ENST00000558282 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
CSPG4P12-201ENST00000558282 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
CSPG4P12-201ENST00000558282 WASHC2CQ9Y4E1 1318 aa13.96□□□□□ -0.17
CSPG4P12-201ENST00000558282 RSPH4AQ5TD94 716 aa13.96□□□□□ -0.17
CSPG4P12-201ENST00000558282 PAXBP1Q9Y5B6 917 aa13.96□□□□□ -0.17
CSPG4P12-201ENST00000558282 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.18
CSPG4P12-201ENST00000558282 JMYQ8N9B5 988 aa13.96□□□□□ -0.18
CSPG4P12-201ENST00000558282 DNAAF4Q8WXU2 420 aa13.96□□□□□ -0.18
CSPG4P12-201ENST00000558282 NUP62CLQ9H1M0 184 aa13.96□□□□□ -0.18
CSPG4P12-201ENST00000558282 CCDC27Q2M243 656 aa13.95□□□□□ -0.18
CSPG4P12-201ENST00000558282 IPO4Q8TEX9 1081 aaKnown RBP13.95□□□□□ -0.18
CSPG4P12-201ENST00000558282 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
CSPG4P12-201ENST00000558282 HS1BP3Q53T59 392 aa13.95□□□□□ -0.18
CSPG4P12-201ENST00000558282 UVSSAQ2YD98 709 aa13.95□□□□□ -0.18
CSPG4P12-201ENST00000558282 SYCE3A1L190 88 aa13.94□□□□□ -0.18
CSPG4P12-201ENST00000558282 SAFB2Q14151 953 aaKnown RBP eCLIP13.94□□□□□ -0.18
CSPG4P12-201ENST00000558282 CCDC181Q5TID7 509 aa13.94□□□□□ -0.18
CSPG4P12-201ENST00000558282 PRM3Q9NNZ6 103 aa13.94□□□□□ -0.18
CSPG4P12-201ENST00000558282 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
CSPG4P12-201ENST00000558282 SMTNL1A8MU46 457 aa13.94□□□□□ -0.18
CSPG4P12-201ENST00000558282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 TNNT1P13805 278 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 MNAT1P51948 309 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 ELL2O00472 640 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 GNAI1P63096 354 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 SOX12O15370 315 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 ANKRD1Q15327 319 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 MAP3K11Q16584 847 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 CNTROBQ8N137 903 aa13.93□□□□□ -0.18
CSPG4P12-201ENST00000558282 TRERF1Q96PN7 1200 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 CUX1P39880 1505 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 ODF2Q5BJF6 829 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 CCDC183Q5T5S1 534 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 MPNDQ8N594 471 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 HIP1O00291 1037 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 JAKMIP3Q5VZ66 844 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 RBM33Q96EV2 1170 aaKnown RBP13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 SFPQP23246 707 aaKnown RBP eCLIP13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 CT47A1Q5JQC4 288 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 EFCAB5A4FU69 1503 aa13.92□□□□□ -0.18
CSPG4P12-201ENST00000558282 GOLGA6L10A0A0M3HER8 536 aa13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 LUZP1Q86V48 1076 aa13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 CCDC148Q8NFR7 591 aa13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 FEZ1Q99689 392 aa13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 NF2P35240 595 aa13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 STK38Q15208 465 aa13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 DHX16O60231 1041 aaKnown RBP13.91□□□□□ -0.18
CSPG4P12-201ENST00000558282 POLR3GO15318 223 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-201ENST00000558282 ANKRD18AQ8IVF6 992 aa13.9□□□□□ -0.18
CSPG4P12-201ENST00000558282 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-201ENST00000558282 CFAP45Q9UL16 551 aa13.9□□□□□ -0.18
CSPG4P12-201ENST00000558282 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
CSPG4P12-201ENST00000558282 SSR1P43307 286 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-201ENST00000558282 ZSCAN31Q96LW9 406 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-201ENST00000558282 XBP1P17861 261 aa13.9□□□□□ -0.19
CSPG4P12-201ENST00000558282 RIPK4P57078 832 aa13.9□□□□□ -0.19
CSPG4P12-201ENST00000558282 SPDYE4A6NLX3 237 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 SLC26A8Q96RN1 970 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 KLHL40Q2TBA0 621 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 RALYLQ86SE5 291 aaKnown RBP13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 KIAA1328Q86T90 577 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 STK26Q9P289 416 aa13.89□□□□□ -0.19
CSPG4P12-201ENST00000558282 UACAQ9BZF9 1416 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 TERF1P54274 439 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 GSDMDP57764 484 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 FAM193AP78312 1265 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 ARHGAP29Q52LW3 1261 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 IGF1RP08069 1367 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 ERICH2A1L162 156 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 CCDC91Q7Z6B0 441 aa13.88□□□□□ -0.19
CSPG4P12-201ENST00000558282 NFXL1Q6ZNB6 911 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 FAM177A1Q8N128 213 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 GOLGA6L9A6NEM1 432 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 EPS15P42566 896 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 LMAN1P49257 510 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 TICAM2Q86XR7 235 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 C9orf78Q9NZ63 289 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 DIAPH1O60610 1272 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms