RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 STK26Q9P289 416 aa15.02■□□□□ -0
IGKV2D-28-202ENST00000558026 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
IGKV2D-28-202ENST00000558026 RRBP1Q9P2E9 1410 aaKnown RBP15.01□□□□□ -0.01
IGKV2D-28-202ENST00000558026 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
IGKV2D-28-202ENST00000558026 DLC1Q96QB1 1528 aa15.01□□□□□ -0.01
IGKV2D-28-202ENST00000558026 KIF1BO60333 1816 aa15.01□□□□□ -0.01
IGKV2D-28-202ENST00000558026 VGFO15240 615 aaPredicted RBP15□□□□□ -0.01
IGKV2D-28-202ENST00000558026 PDE3BQ13370 1112 aa14.99□□□□□ -0.01
IGKV2D-28-202ENST00000558026 USP35Q9P2H5 1018 aa14.99□□□□□ -0.01
IGKV2D-28-202ENST00000558026 TECPR2O15040 1411 aa14.99□□□□□ -0.01
IGKV2D-28-202ENST00000558026 NRXN1Q9ULB1 1477 aa14.98□□□□□ -0.01
IGKV2D-28-202ENST00000558026 CAPN15O75808 1086 aa14.98□□□□□ -0.01
IGKV2D-28-202ENST00000558026 STRN4Q9NRL3 753 aa14.98□□□□□ -0.01
IGKV2D-28-202ENST00000558026 GPR162Q16538 588 aa14.97□□□□□ -0.01
IGKV2D-28-202ENST00000558026 IFT172Q9UG01 1749 aa14.97□□□□□ -0.01
IGKV2D-28-202ENST00000558026 PRDM11Q9NQV5 511 aa14.96□□□□□ -0.01
IGKV2D-28-202ENST00000558026 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
IGKV2D-28-202ENST00000558026 HSPA6P17066 643 aa14.95□□□□□ -0.02
IGKV2D-28-202ENST00000558026 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
IGKV2D-28-202ENST00000558026 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
IGKV2D-28-202ENST00000558026 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
IGKV2D-28-202ENST00000558026 ALS2Q96Q42 1657 aa14.94□□□□□ -0.02
IGKV2D-28-202ENST00000558026 RGPD3A6NKT7 1758 aaPredicted RBP14.94□□□□□ -0.02
IGKV2D-28-202ENST00000558026 RGPD4Q7Z3J3 1758 aa14.94□□□□□ -0.02
IGKV2D-28-202ENST00000558026 PMFBP1Q8TBY8 1022 aa14.94□□□□□ -0.02
IGKV2D-28-202ENST00000558026 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
IGKV2D-28-202ENST00000558026 PPLO60437 1756 aa14.93□□□□□ -0.02
IGKV2D-28-202ENST00000558026 PTF1AQ7RTS3 328 aa14.93□□□□□ -0.02
IGKV2D-28-202ENST00000558026 PROM2Q8N271 834 aa14.92□□□□□ -0.02
IGKV2D-28-202ENST00000558026 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
IGKV2D-28-202ENST00000558026 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
IGKV2D-28-202ENST00000558026 ARXQ96QS3 562 aa14.91□□□□□ -0.02
IGKV2D-28-202ENST00000558026 SBF2Q86WG5 1849 aa14.91□□□□□ -0.02
IGKV2D-28-202ENST00000558026 GOLGB1Q14789 3259 aaKnown RBP14.9□□□□□ -0.02
IGKV2D-28-202ENST00000558026 KIAA0232Q92628 1395 aa14.9□□□□□ -0.02
IGKV2D-28-202ENST00000558026 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
IGKV2D-28-202ENST00000558026 PLSCR1O15162 318 aa14.9□□□□□ -0.02
IGKV2D-28-202ENST00000558026 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
IGKV2D-28-202ENST00000558026 MTFR1LQ9H019 292 aa14.9□□□□□ -0.02
IGKV2D-28-202ENST00000558026 PEAK1Q9H792 1746 aa14.89□□□□□ -0.03
IGKV2D-28-202ENST00000558026 ABCC11Q96J66 1382 aa14.88□□□□□ -0.03
IGKV2D-28-202ENST00000558026 MAP3K5Q99683 1374 aa14.87□□□□□ -0.03
IGKV2D-28-202ENST00000558026 SSH2Q76I76 1423 aa14.87□□□□□ -0.03
IGKV2D-28-202ENST00000558026 COL13A1Q5TAT6 717 aaPredicted RBP14.87□□□□□ -0.03
IGKV2D-28-202ENST00000558026 ADGRF5Q8IZF2 1346 aa14.87□□□□□ -0.03
IGKV2D-28-202ENST00000558026 ATP10DQ9P241 1426 aa14.86□□□□□ -0.03
IGKV2D-28-202ENST00000558026 LARP1Q6PKG0 1096 aaKnown RBP14.86□□□□□ -0.03
IGKV2D-28-202ENST00000558026 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
IGKV2D-28-202ENST00000558026 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
IGKV2D-28-202ENST00000558026 RPGRIP1LQ68CZ1 1315 aa14.86□□□□□ -0.03
IGKV2D-28-202ENST00000558026 EVA1CP58658 441 aa14.85□□□□□ -0.03
IGKV2D-28-202ENST00000558026 ZC3H6P61129 1189 aaKnown RBP14.85□□□□□ -0.03
IGKV2D-28-202ENST00000558026 SLC15A2Q16348 729 aa14.85□□□□□ -0.03
IGKV2D-28-202ENST00000558026 TCP11L2Q8N4U5 519 aa14.85□□□□□ -0.03
IGKV2D-28-202ENST00000558026 ROCK1Q13464 1354 aa14.85□□□□□ -0.03
IGKV2D-28-202ENST00000558026 PARP4Q9UKK3 1724 aaKnown RBP14.84□□□□□ -0.03
IGKV2D-28-202ENST00000558026 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.03
IGKV2D-28-202ENST00000558026 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.03
IGKV2D-28-202ENST00000558026 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.03
IGKV2D-28-202ENST00000558026 SLC34A2O95436 690 aa14.83□□□□□ -0.04
IGKV2D-28-202ENST00000558026 APLP2Q06481 763 aa14.83□□□□□ -0.04
IGKV2D-28-202ENST00000558026 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.04
IGKV2D-28-202ENST00000558026 PHRF1Q9P1Y6 1649 aaKnown RBP14.82□□□□□ -0.04
IGKV2D-28-202ENST00000558026 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
IGKV2D-28-202ENST00000558026 ZNF526Q8TF50 670 aaPredicted RBP14.82□□□□□ -0.04
IGKV2D-28-202ENST00000558026 GPBP1L1Q9HC44 474 aaPredicted RBP14.82□□□□□ -0.04
IGKV2D-28-202ENST00000558026 ACIN1Q9UKV3 1341 aaKnown RBP14.82□□□□□ -0.04
IGKV2D-28-202ENST00000558026 GPRASP1Q5JY77 1395 aa14.82□□□□□ -0.04
IGKV2D-28-202ENST00000558026 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
IGKV2D-28-202ENST00000558026 TXNRD1Q16881 649 aa14.81□□□□□ -0.04
IGKV2D-28-202ENST00000558026 YBX3P16989 372 aaKnown RBP eCLIP14.8□□□□□ -0.04
IGKV2D-28-202ENST00000558026 PRELPP51888 382 aa14.8□□□□□ -0.04
IGKV2D-28-202ENST00000558026 NLGN2Q8NFZ4 835 aa14.8□□□□□ -0.04
IGKV2D-28-202ENST00000558026 LRRC37A3O60309 1634 aa14.78□□□□□ -0.04
IGKV2D-28-202ENST00000558026 ATP7BP35670 1465 aa14.78□□□□□ -0.04
IGKV2D-28-202ENST00000558026 ANKARQ7Z5J8 1434 aa14.78□□□□□ -0.04
IGKV2D-28-202ENST00000558026 NUTM2GQ5VZR2 741 aa14.78□□□□□ -0.04
IGKV2D-28-202ENST00000558026 DNAJC5GQ8N7S2 189 aa14.78□□□□□ -0.04
IGKV2D-28-202ENST00000558026 C11orf95C9JLR9 678 aaPredicted RBP14.77□□□□□ -0.05
IGKV2D-28-202ENST00000558026 ITGAEP38570 1179 aa14.77□□□□□ -0.05
IGKV2D-28-202ENST00000558026 TNS4Q8IZW8 715 aa14.77□□□□□ -0.05
IGKV2D-28-202ENST00000558026 PRR36Q9H6K5 1346 aa14.76□□□□□ -0.05
IGKV2D-28-202ENST00000558026 THRAP3Q9Y2W1 955 aaKnown RBP14.76□□□□□ -0.05
IGKV2D-28-202ENST00000558026 LMO7Q8WWI1 1683 aa14.76□□□□□ -0.05
IGKV2D-28-202ENST00000558026 PRAM1Q96QH2 718 aa14.75□□□□□ -0.05
IGKV2D-28-202ENST00000558026 SIRT1Q96EB6 747 aa14.74□□□□□ -0.05
IGKV2D-28-202ENST00000558026 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
IGKV2D-28-202ENST00000558026 LOC105371045A0A1W2PR82 267 aa14.73□□□□□ -0.05
IGKV2D-28-202ENST00000558026 APLP1P51693 650 aa14.73□□□□□ -0.05
IGKV2D-28-202ENST00000558026 RGL3Q3MIN7 710 aa14.73□□□□□ -0.05
IGKV2D-28-202ENST00000558026 MARCH10Q8NA82 808 aaPredicted RBP14.73□□□□□ -0.05
IGKV2D-28-202ENST00000558026 NGDNQ8NEJ9 315 aaKnown RBP14.73□□□□□ -0.05
IGKV2D-28-202ENST00000558026 HIRIP3Q9BW71 556 aaPredicted RBP14.73□□□□□ -0.05
IGKV2D-28-202ENST00000558026 TOPAZ1Q8N9V7 1692 aa14.72□□□□□ -0.05
IGKV2D-28-202ENST00000558026 GRIN3BO60391 1043 aa14.72□□□□□ -0.05
IGKV2D-28-202ENST00000558026 DDB1Q16531 1140 aa14.72□□□□□ -0.05
IGKV2D-28-202ENST00000558026 ADCY9O60503 1353 aa14.72□□□□□ -0.05
IGKV2D-28-202ENST00000558026 PAPPAQ13219 1627 aa14.71□□□□□ -0.05
IGKV2D-28-202ENST00000558026 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
IGKV2D-28-202ENST00000558026 PIK3C2GO75747 1445 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms