RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 CHMP4BP1P59074 171 aa16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 CCAR2Q8N163 923 aaKnown RBP16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 TOPBP1Q92547 1522 aa16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 PHF14O94880 888 aa16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
SEMA6D-208ENST00000558014 LRRC9Q6ZRR7 1453 aa16.6■□□□□ 0.25
SEMA6D-208ENST00000558014 CENPQQ7L2Z9 268 aaPredicted RBP16.6■□□□□ 0.25
SEMA6D-208ENST00000558014 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
SEMA6D-208ENST00000558014 REC8O95072 547 aa16.6■□□□□ 0.25
SEMA6D-208ENST00000558014 BICD2Q8TD16 824 aa16.6■□□□□ 0.25
SEMA6D-208ENST00000558014 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
SEMA6D-208ENST00000558014 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
SEMA6D-208ENST00000558014 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
SEMA6D-208ENST00000558014 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
SEMA6D-208ENST00000558014 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
SEMA6D-208ENST00000558014 PTMSP20962 102 aa16.59■□□□□ 0.25
SEMA6D-208ENST00000558014 SAFBQ15424 915 aaKnown RBP eCLIP16.59■□□□□ 0.25
SEMA6D-208ENST00000558014 ERBINQ96RT1 1412 aa16.59■□□□□ 0.25
SEMA6D-208ENST00000558014 ZPR1O75312 459 aa16.58■□□□□ 0.25
SEMA6D-208ENST00000558014 GRM1Q13255 1194 aa16.58■□□□□ 0.25
SEMA6D-208ENST00000558014 CLASRPQ8N2M8 674 aaKnown RBP16.58■□□□□ 0.25
SEMA6D-208ENST00000558014 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.25
SEMA6D-208ENST00000558014 TTLL12Q14166 644 aaPredicted RBP16.58■□□□□ 0.24
SEMA6D-208ENST00000558014 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
SEMA6D-208ENST00000558014 CCDC158Q5M9N0 1113 aa16.58■□□□□ 0.24
SEMA6D-208ENST00000558014 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
SEMA6D-208ENST00000558014 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
SEMA6D-208ENST00000558014 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
SEMA6D-208ENST00000558014 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
SEMA6D-208ENST00000558014 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
SEMA6D-208ENST00000558014 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
SEMA6D-208ENST00000558014 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
SEMA6D-208ENST00000558014 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
SEMA6D-208ENST00000558014 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
SEMA6D-208ENST00000558014 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
SEMA6D-208ENST00000558014 PAF1Q8N7H5 531 aa16.55■□□□□ 0.24
SEMA6D-208ENST00000558014 PIBF1Q8WXW3 757 aa16.55■□□□□ 0.24
SEMA6D-208ENST00000558014 SMC3Q9UQE7 1217 aa16.54■□□□□ 0.24
SEMA6D-208ENST00000558014 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
SEMA6D-208ENST00000558014 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
SEMA6D-208ENST00000558014 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
SEMA6D-208ENST00000558014 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.54■□□□□ 0.24
SEMA6D-208ENST00000558014 ZFYVE27Q5T4F4 411 aa16.54■□□□□ 0.24
SEMA6D-208ENST00000558014 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
SEMA6D-208ENST00000558014 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
SEMA6D-208ENST00000558014 TPM1P09493 284 aa16.53■□□□□ 0.24
SEMA6D-208ENST00000558014 PPP2R1AP30153 589 aa16.53■□□□□ 0.24
SEMA6D-208ENST00000558014 BRMS1Q9HCU9 246 aa16.53■□□□□ 0.24
SEMA6D-208ENST00000558014 RAI14Q9P0K7 980 aa16.53■□□□□ 0.24
SEMA6D-208ENST00000558014 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
SEMA6D-208ENST00000558014 CNTROBQ8N137 903 aa16.53■□□□□ 0.24
SEMA6D-208ENST00000558014 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
SEMA6D-208ENST00000558014 MPHOSPH10O00566 681 aaKnown RBP16.52■□□□□ 0.24
SEMA6D-208ENST00000558014 ARAP1Q96P48 1450 aa16.52■□□□□ 0.24
SEMA6D-208ENST00000558014 STAC3Q96MF2 364 aa16.52■□□□□ 0.23
SEMA6D-208ENST00000558014 CHRNA2Q15822 529 aa16.52■□□□□ 0.23
SEMA6D-208ENST00000558014 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.23
SEMA6D-208ENST00000558014 CT47A1Q5JQC4 288 aaPredicted RBP16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 C8orf37Q96NL8 207 aa16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 GNAI3P08754 354 aa16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 DEKP35659 375 aaKnown RBP16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 STARD3NLO95772 234 aa16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 ANKIB1Q9P2G1 1089 aa16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 NOB1Q9ULX3 412 aaKnown RBP16.51■□□□□ 0.23
SEMA6D-208ENST00000558014 HSPA2P54652 639 aa16.5■□□□□ 0.23
SEMA6D-208ENST00000558014 NAP1L1P55209 391 aaKnown RBP16.5■□□□□ 0.23
SEMA6D-208ENST00000558014 NUP133Q8WUM0 1156 aa16.5■□□□□ 0.23
SEMA6D-208ENST00000558014 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
SEMA6D-208ENST00000558014 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
SEMA6D-208ENST00000558014 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
SEMA6D-208ENST00000558014 PDE4AP27815 886 aa16.5■□□□□ 0.23
SEMA6D-208ENST00000558014 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
SEMA6D-208ENST00000558014 XBP1P17861 261 aa16.49■□□□□ 0.23
SEMA6D-208ENST00000558014 EPS15P42566 896 aa16.49■□□□□ 0.23
SEMA6D-208ENST00000558014 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
SEMA6D-208ENST00000558014 ANKRD20A12PQ8NF67 263 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 MCM10Q7L590 875 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 ZHX3Q9H4I2 956 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 NINLQ9Y2I6 1382 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 GNAI2P04899 355 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 STK3Q13188 491 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 LRP2BPQ9P2M1 347 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
SEMA6D-208ENST00000558014 EXOC5O00471 708 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 KRT18P05783 430 aaKnown RBP16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 ODF2Q5BJF6 829 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 ZNF592Q92610 1267 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 ACSBG1Q96GR2 724 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 CDK5RAP3Q96JB5 506 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 SRCIN1Q9C0H9 1055 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
SEMA6D-208ENST00000558014 CEBPZQ03701 1054 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms