RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
TMEM260-215ENST00000557626 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
TMEM260-215ENST00000557626 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
TMEM260-215ENST00000557626 CAPN15O75808 1086 aa20.52■□□□□ 0.88
TMEM260-215ENST00000557626 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
TMEM260-215ENST00000557626 PHF8Q9UPP1 1060 aa20.51■□□□□ 0.87
TMEM260-215ENST00000557626 RGPD8O14715 1765 aaPredicted RBP20.51■□□□□ 0.87
TMEM260-215ENST00000557626 KIF1BO60333 1816 aa20.5■□□□□ 0.87
TMEM260-215ENST00000557626 CLTCL1P53675 1640 aa20.49■□□□□ 0.87
TMEM260-215ENST00000557626 NUP155O75694 1391 aa20.49■□□□□ 0.87
TMEM260-215ENST00000557626 WAPLQ7Z5K2 1190 aa20.48■□□□□ 0.87
TMEM260-215ENST00000557626 NRXN1Q9ULB1 1477 aa20.47■□□□□ 0.87
TMEM260-215ENST00000557626 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
TMEM260-215ENST00000557626 TECPR2O15040 1411 aa20.45■□□□□ 0.86
TMEM260-215ENST00000557626 PRDM11Q9NQV5 511 aa20.45■□□□□ 0.86
TMEM260-215ENST00000557626 MAP3K5Q99683 1374 aa20.45■□□□□ 0.86
TMEM260-215ENST00000557626 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
TMEM260-215ENST00000557626 SLC34A2O95436 690 aa20.44■□□□□ 0.86
TMEM260-215ENST00000557626 MTFR1LQ9H019 292 aa20.44■□□□□ 0.86
TMEM260-215ENST00000557626 USP35Q9P2H5 1018 aa20.44■□□□□ 0.86
TMEM260-215ENST00000557626 STRN4Q9NRL3 753 aa20.43■□□□□ 0.86
TMEM260-215ENST00000557626 PLSCR1O15162 318 aa20.42■□□□□ 0.86
TMEM260-215ENST00000557626 ARXQ96QS3 562 aa20.42■□□□□ 0.86
TMEM260-215ENST00000557626 SGIP1Q9BQI5 828 aa20.42■□□□□ 0.86
TMEM260-215ENST00000557626 STK26Q9P289 416 aa20.42■□□□□ 0.86
TMEM260-215ENST00000557626 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
TMEM260-215ENST00000557626 PELP1Q8IZL8 1130 aaKnown RBP20.41■□□□□ 0.86
TMEM260-215ENST00000557626 PLEKHH1Q9ULM0 1364 aa20.41■□□□□ 0.86
TMEM260-215ENST00000557626 FAM50AQ14320 339 aaKnown RBP20.4■□□□□ 0.86
TMEM260-215ENST00000557626 ALS2Q96Q42 1657 aa20.4■□□□□ 0.86
TMEM260-215ENST00000557626 TRPM3Q9HCF6 1732 aaPredicted RBP20.4■□□□□ 0.86
TMEM260-215ENST00000557626 CRYBG1Q9Y4K1 1723 aa20.39■□□□□ 0.86
TMEM260-215ENST00000557626 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
TMEM260-215ENST00000557626 STK32BQ9NY57 414 aa20.39■□□□□ 0.85
TMEM260-215ENST00000557626 KNDC1Q76NI1 1749 aa20.38■□□□□ 0.85
TMEM260-215ENST00000557626 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
TMEM260-215ENST00000557626 PRELPP51888 382 aa20.37■□□□□ 0.85
TMEM260-215ENST00000557626 PPLO60437 1756 aa20.36■□□□□ 0.85
TMEM260-215ENST00000557626 SBF2Q86WG5 1849 aa20.36■□□□□ 0.85
TMEM260-215ENST00000557626 GPBP1L1Q9HC44 474 aaPredicted RBP20.35■□□□□ 0.85
TMEM260-215ENST00000557626 OVOS2A0A0G2JMS6 1433 aa20.35■□□□□ 0.85
TMEM260-215ENST00000557626 OVOS2A0A0J9YW53 1432 aa20.35■□□□□ 0.85
TMEM260-215ENST00000557626 OVOS2Q6IE36 1432 aa20.35■□□□□ 0.85
TMEM260-215ENST00000557626 COL13A1Q5TAT6 717 aaPredicted RBP20.34■□□□□ 0.85
TMEM260-215ENST00000557626 PMFBP1Q8TBY8 1022 aa20.34■□□□□ 0.85
TMEM260-215ENST00000557626 RPGRIP1LQ68CZ1 1315 aa20.33■□□□□ 0.85
TMEM260-215ENST00000557626 CHRNA2Q15822 529 aa20.33■□□□□ 0.85
TMEM260-215ENST00000557626 SLC15A2Q16348 729 aa20.33■□□□□ 0.85
TMEM260-215ENST00000557626 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.84
TMEM260-215ENST00000557626 KIAA0232Q92628 1395 aa20.33■□□□□ 0.84
TMEM260-215ENST00000557626 PEAK1Q9H792 1746 aa20.32■□□□□ 0.84
TMEM260-215ENST00000557626 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
TMEM260-215ENST00000557626 SSH2Q76I76 1423 aa20.31■□□□□ 0.84
TMEM260-215ENST00000557626 TNS4Q8IZW8 715 aa20.31■□□□□ 0.84
TMEM260-215ENST00000557626 KLHL34Q8N239 644 aa20.31■□□□□ 0.84
TMEM260-215ENST00000557626 PROM2Q8N271 834 aa20.31■□□□□ 0.84
TMEM260-215ENST00000557626 TCP11L2Q8N4U5 519 aa20.31■□□□□ 0.84
TMEM260-215ENST00000557626 EVA1CP58658 441 aa20.3■□□□□ 0.84
TMEM260-215ENST00000557626 GPRASP1Q5JY77 1395 aa20.3■□□□□ 0.84
TMEM260-215ENST00000557626 ROCK1Q13464 1354 aa20.27■□□□□ 0.84
TMEM260-215ENST00000557626 APLP1P51693 650 aa20.27■□□□□ 0.84
TMEM260-215ENST00000557626 APLP2Q06481 763 aa20.27■□□□□ 0.84
TMEM260-215ENST00000557626 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
TMEM260-215ENST00000557626 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
TMEM260-215ENST00000557626 PTF1AQ7RTS3 328 aa20.25■□□□□ 0.83
TMEM260-215ENST00000557626 THRAP3Q9Y2W1 955 aaKnown RBP20.25■□□□□ 0.83
TMEM260-215ENST00000557626 PHRF1Q9P1Y6 1649 aaKnown RBP20.24■□□□□ 0.83
TMEM260-215ENST00000557626 TXNRD1Q16881 649 aa20.24■□□□□ 0.83
TMEM260-215ENST00000557626 ZNF526Q8TF50 670 aaPredicted RBP20.24■□□□□ 0.83
TMEM260-215ENST00000557626 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
TMEM260-215ENST00000557626 PAK3O75914 559 aaPredicted RBP20.23■□□□□ 0.83
TMEM260-215ENST00000557626 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
TMEM260-215ENST00000557626 ANKARQ7Z5J8 1434 aa20.23■□□□□ 0.83
TMEM260-215ENST00000557626 ATP7BP35670 1465 aa20.23■□□□□ 0.83
TMEM260-215ENST00000557626 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
TMEM260-215ENST00000557626 DNAJC5GQ8N7S2 189 aa20.22■□□□□ 0.83
TMEM260-215ENST00000557626 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
TMEM260-215ENST00000557626 ACIN1Q9UKV3 1341 aaKnown RBP20.22■□□□□ 0.83
TMEM260-215ENST00000557626 YTHDC2Q9H6S0 1430 aaKnown RBP20.21■□□□□ 0.83
TMEM260-215ENST00000557626 PCNTO95613 3336 aa20.21■□□□□ 0.83
TMEM260-215ENST00000557626 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.82
TMEM260-215ENST00000557626 LRRC37A3O60309 1634 aa20.2■□□□□ 0.82
TMEM260-215ENST00000557626 NLGN2Q8NFZ4 835 aa20.19■□□□□ 0.82
TMEM260-215ENST00000557626 ADGRF5Q8IZF2 1346 aa20.19■□□□□ 0.82
TMEM260-215ENST00000557626 TOPAZ1Q8N9V7 1692 aa20.19■□□□□ 0.82
TMEM260-215ENST00000557626 POLD1P28340 1107 aa20.17■□□□□ 0.82
TMEM260-215ENST00000557626 ADCY9O60503 1353 aa20.17■□□□□ 0.82
TMEM260-215ENST00000557626 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
TMEM260-215ENST00000557626 SAFB2Q14151 953 aaKnown RBP eCLIP20.15■□□□□ 0.82
TMEM260-215ENST00000557626 AKAP12Q02952 1782 aa20.14■□□□□ 0.81
TMEM260-215ENST00000557626 LMO7Q8WWI1 1683 aa20.14■□□□□ 0.81
TMEM260-215ENST00000557626 AATKQ6ZMQ8 1374 aa20.14■□□□□ 0.81
TMEM260-215ENST00000557626 DDB1Q16531 1140 aa20.14■□□□□ 0.81
TMEM260-215ENST00000557626 PAPPAQ13219 1627 aa20.12■□□□□ 0.81
TMEM260-215ENST00000557626 KIF3CO14782 793 aa20.11■□□□□ 0.81
TMEM260-215ENST00000557626 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
TMEM260-215ENST00000557626 BCL9O00512 1426 aa20.1■□□□□ 0.81
TMEM260-215ENST00000557626 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
TMEM260-215ENST00000557626 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
TMEM260-215ENST00000557626 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms