RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TJAP1Q5JTD0 557 aa7.98□□□□□ -1.13
ATXN3-247ENST00000557311 MLH3Q9UHC1 1453 aa7.98□□□□□ -1.13
ATXN3-247ENST00000557311 EEA1Q15075 1411 aa7.97□□□□□ -1.13
ATXN3-247ENST00000557311 TOM1O60784 492 aa7.97□□□□□ -1.13
ATXN3-247ENST00000557311 HSPA1LP34931 641 aa7.97□□□□□ -1.13
ATXN3-247ENST00000557311 SLC4A3P48751 1232 aa7.97□□□□□ -1.13
ATXN3-247ENST00000557311 KRI1Q8N9T8 703 aaKnown RBP7.97□□□□□ -1.13
ATXN3-247ENST00000557311 RBM46Q8TBY0 533 aaKnown RBP7.97□□□□□ -1.13
ATXN3-247ENST00000557311 NPATQ14207 1427 aa7.96□□□□□ -1.13
ATXN3-247ENST00000557311 LCE2BO14633 110 aa7.96□□□□□ -1.14
ATXN3-247ENST00000557311 UBTFP17480 764 aaKnown RBP7.96□□□□□ -1.14
ATXN3-247ENST00000557311 AGLP35573 1532 aa7.96□□□□□ -1.14
ATXN3-247ENST00000557311 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
ATXN3-247ENST00000557311 TROQ12816 1431 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-247ENST00000557311 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
ATXN3-247ENST00000557311 PIP4K2BP78356 416 aa7.95□□□□□ -1.14
ATXN3-247ENST00000557311 CLIP1P30622 1438 aa7.95□□□□□ -1.14
ATXN3-247ENST00000557311 ARHGAP5Q13017 1502 aa7.94□□□□□ -1.14
ATXN3-247ENST00000557311 REREQ9P2R6 1566 aa7.94□□□□□ -1.14
ATXN3-247ENST00000557311 FECHP22830 423 aa7.94□□□□□ -1.14
ATXN3-247ENST00000557311 Q6ZNB5 142 aa7.94□□□□□ -1.14
ATXN3-247ENST00000557311 KDM5CP41229 1560 aa7.93□□□□□ -1.14
ATXN3-247ENST00000557311 OATP04181 439 aa7.93□□□□□ -1.14
ATXN3-247ENST00000557311 ZNF516Q92618 1163 aa7.93□□□□□ -1.14
ATXN3-247ENST00000557311 MTRQ99707 1265 aa7.93□□□□□ -1.14
ATXN3-247ENST00000557311 ADGRG1Q9Y653 693 aa7.93□□□□□ -1.14
ATXN3-247ENST00000557311 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
ATXN3-247ENST00000557311 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
ATXN3-247ENST00000557311 GGT6Q6P531 493 aa7.92□□□□□ -1.14
ATXN3-247ENST00000557311 TTC13Q8NBP0 860 aa7.92□□□□□ -1.14
ATXN3-247ENST00000557311 ZNF777Q9ULD5 760 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-247ENST00000557311 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
ATXN3-247ENST00000557311 DNAJB2P25686 324 aa7.91□□□□□ -1.14
ATXN3-247ENST00000557311 APLP1P51693 650 aa7.91□□□□□ -1.14
ATXN3-247ENST00000557311 HNRNPMP52272 730 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-247ENST00000557311 SWT1Q5T5J6 900 aaKnown RBP7.91□□□□□ -1.14
ATXN3-247ENST00000557311 PLA2R1Q13018 1463 aa7.91□□□□□ -1.14
ATXN3-247ENST00000557311 RCCD1A6NED2 376 aa7.9□□□□□ -1.14
ATXN3-247ENST00000557311 GPR37O15354 613 aa7.9□□□□□ -1.14
ATXN3-247ENST00000557311 PPP1R18Q6NYC8 613 aa7.9□□□□□ -1.14
ATXN3-247ENST00000557311 NKX2-3Q8TAU0 364 aa7.9□□□□□ -1.14
ATXN3-247ENST00000557311 EYA1Q99502 592 aa7.9□□□□□ -1.14
ATXN3-247ENST00000557311 C3P01024 1663 aa7.89□□□□□ -1.15
ATXN3-247ENST00000557311 TCOF1Q13428 1488 aaKnown RBP7.89□□□□□ -1.15
ATXN3-247ENST00000557311 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
ATXN3-247ENST00000557311 MAP2K5Q13163 448 aa7.89□□□□□ -1.15
ATXN3-247ENST00000557311 ANKLE2Q86XL3 938 aa7.89□□□□□ -1.15
ATXN3-247ENST00000557311 SLF2Q8IX21 1173 aa7.89□□□□□ -1.15
ATXN3-247ENST00000557311 ZC3H15Q8WU90 426 aaKnown RBP7.89□□□□□ -1.15
ATXN3-247ENST00000557311 PRKD2Q9BZL6 878 aa7.89□□□□□ -1.15
ATXN3-247ENST00000557311 GFRA3O60609 400 aa7.88□□□□□ -1.15
ATXN3-247ENST00000557311 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-247ENST00000557311 NLRP7Q8WX94 980 aa7.88□□□□□ -1.15
ATXN3-247ENST00000557311 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
ATXN3-247ENST00000557311 KIF14Q15058 1648 aa7.88□□□□□ -1.15
ATXN3-247ENST00000557311 ARHGAP35Q9NRY4 1499 aa7.87□□□□□ -1.15
ATXN3-247ENST00000557311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.87□□□□□ -1.15
ATXN3-247ENST00000557311 METTL3Q86U44 580 aaKnown RBP7.87□□□□□ -1.15
ATXN3-247ENST00000557311 PXYLP1Q8TE99 480 aa7.87□□□□□ -1.15
ATXN3-247ENST00000557311 CFDP1Q9UEE9 299 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-247ENST00000557311 MYO5CQ9NQX4 1742 aa7.86□□□□□ -1.15
ATXN3-247ENST00000557311 ABCA6Q8N139 1617 aa7.86□□□□□ -1.15
ATXN3-247ENST00000557311 MINK1Q8N4C8 1332 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-247ENST00000557311 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
ATXN3-247ENST00000557311 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
ATXN3-247ENST00000557311 CPS1P31327 1500 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 ABCC1P33527 1531 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 IRF6O14896 467 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 RSPH4AQ5TD94 716 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-247ENST00000557311 RDH13Q8NBN7 331 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 NECTIN2Q92692 538 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 CCDC102AQ96A19 550 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 A2MP01023 1474 aa7.85□□□□□ -1.15
ATXN3-247ENST00000557311 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-247ENST00000557311 A2ML1A8K2U0 1454 aa7.84□□□□□ -1.15
ATXN3-247ENST00000557311 TRAF7Q6Q0C0 670 aa7.84□□□□□ -1.15
ATXN3-247ENST00000557311 TMEM134Q9H6X4 195 aa7.84□□□□□ -1.15
ATXN3-247ENST00000557311 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.84□□□□□ -1.15
ATXN3-247ENST00000557311 TNRQ92752 1358 aa7.84□□□□□ -1.16
ATXN3-247ENST00000557311 COPS2P61201 443 aa7.83□□□□□ -1.16
ATXN3-247ENST00000557311 LAPTM4AQ15012 233 aa7.83□□□□□ -1.16
ATXN3-247ENST00000557311 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-247ENST00000557311 CASKIN1Q8WXD9 1431 aa7.83□□□□□ -1.16
ATXN3-247ENST00000557311 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-247ENST00000557311 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
ATXN3-247ENST00000557311 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 CCDC18Q5T9S5 1454 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 DDX11L8A8MPP1 907 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 KIF3BO15066 747 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 ZMYND10O75800 440 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 MDM2Q00987 491 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-247ENST00000557311 BARGINQ6ZT62 677 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
ATXN3-247ENST00000557311 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
ATXN3-247ENST00000557311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-247ENST00000557311 V9GY48 417 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-247ENST00000557311 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms