RNA–Protein interactions for RNA: ENST00000556986.1

KLC1-221, Transcript of kinesin light chain 1, humanhuman

TSL 1 (best)

Gene KLC1, Length 1,150 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-221ENST00000556986 QTRT2Q9H974 415 aaKnown RBP30.56■■■□□ 2.48
KLC1-221ENST00000556986 USP21Q9UK80 565 aa30.56■■■□□ 2.48
KLC1-221ENST00000556986 BCL9LQ86UU0 1499 aa30.56■■■□□ 2.48
KLC1-221ENST00000556986 SLIT2O94813 1529 aa30.54■■■□□ 2.48
KLC1-221ENST00000556986 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.53■■■□□ 2.48
KLC1-221ENST00000556986 RXRBP28702 533 aa30.53■■■□□ 2.48
KLC1-221ENST00000556986 TESK2Q96S53 571 aa30.53■■■□□ 2.48
KLC1-221ENST00000556986 AKAP12Q02952 1782 aa30.53■■■□□ 2.48
KLC1-221ENST00000556986 BRD4O60885 1362 aaPredicted RBP30.53■■■□□ 2.48
KLC1-221ENST00000556986 ATAD2Q6PL18 1390 aa30.53■■■□□ 2.48
KLC1-221ENST00000556986 ST20-MTHFSA0A0A6YYL1 179 aa30.51■■■□□ 2.47
KLC1-221ENST00000556986 CDK12Q9NYV4 1490 aaPredicted RBP30.5■■■□□ 2.47
KLC1-221ENST00000556986 ATRNO75882 1429 aa30.5■■■□□ 2.47
KLC1-221ENST00000556986 USP6P35125 1406 aa30.5■■■□□ 2.47
KLC1-221ENST00000556986 PLEKHG5O94827 1062 aa30.5■■■□□ 2.47
KLC1-221ENST00000556986 HAP1P54257 671 aaPredicted RBP30.5■■■□□ 2.47
KLC1-221ENST00000556986 SSH2Q76I76 1423 aa30.49■■■□□ 2.47
KLC1-221ENST00000556986 PHRF1Q9P1Y6 1649 aaKnown RBP30.49■■■□□ 2.47
KLC1-221ENST00000556986 TRPC5Q9UL62 973 aaPredicted RBP30.49■■■□□ 2.47
KLC1-221ENST00000556986 NWD2Q9ULI1 1742 aa30.49■■■□□ 2.47
KLC1-221ENST00000556986 PLCH1Q4KWH8 1693 aa30.49■■■□□ 2.47
KLC1-221ENST00000556986 RBM6P78332 1123 aaKnown RBP30.48■■■□□ 2.47
KLC1-221ENST00000556986 PUS7Q96PZ0 661 aaKnown RBP30.48■■■□□ 2.47
KLC1-221ENST00000556986 USP47Q96K76 1375 aa30.46■■■□□ 2.47
KLC1-221ENST00000556986 FAM83GA6ND36 823 aa30.46■■■□□ 2.47
KLC1-221ENST00000556986 CPSF1Q10570 1443 aaKnown RBP30.46■■■□□ 2.47
KLC1-221ENST00000556986 ZNF692Q9BU19 519 aaPredicted RBP30.45■■■□□ 2.47
KLC1-221ENST00000556986 UNC5CLQ8IV45 518 aa30.44■■■□□ 2.46
KLC1-221ENST00000556986 ABTB2Q8N961 1025 aa30.44■■■□□ 2.46
KLC1-221ENST00000556986 SLC24A1O60721 1099 aa30.43■■■□□ 2.46
KLC1-221ENST00000556986 COL14A1Q05707 1796 aaKnown RBP30.43■■■□□ 2.46
KLC1-221ENST00000556986 NUTM2GQ5VZR2 741 aa30.42■■■□□ 2.46
KLC1-221ENST00000556986 MON2Q7Z3U7 1717 aa30.42■■■□□ 2.46
KLC1-221ENST00000556986 USP19O94966 1318 aa30.41■■■□□ 2.46
KLC1-221ENST00000556986 NRKQ7Z2Y5 1582 aa30.41■■■□□ 2.46
KLC1-221ENST00000556986 CD163L1Q9NR16 1453 aa30.4■■■□□ 2.46
KLC1-221ENST00000556986 PIK3C2AO00443 1686 aa30.39■■■□□ 2.46
KLC1-221ENST00000556986 NRAPQ86VF7 1730 aa30.39■■■□□ 2.46
KLC1-221ENST00000556986 RGS12O14924 1447 aa30.39■■■□□ 2.45
KLC1-221ENST00000556986 NLRP13Q86W25 1043 aa30.38■■■□□ 2.45
KLC1-221ENST00000556986 GJD4Q96KN9 370 aaPredicted RBP30.37■■■□□ 2.45
KLC1-221ENST00000556986 TTC21BQ7Z4L5 1316 aa30.36■■■□□ 2.45
KLC1-221ENST00000556986 SLC12A5Q9H2X9 1139 aa30.35■■■□□ 2.45
KLC1-221ENST00000556986 KTN1Q86UP2 1357 aaKnown RBP30.35■■■□□ 2.45
KLC1-221ENST00000556986 GLI3P10071 1580 aa30.35■■■□□ 2.45
KLC1-221ENST00000556986 KIAA0232Q92628 1395 aa30.34■■■□□ 2.45
KLC1-221ENST00000556986 VPS72Q15906 364 aa30.33■■■□□ 2.45
KLC1-221ENST00000556986 SLIT3O75094 1523 aa30.32■■■□□ 2.44
KLC1-221ENST00000556986 TTC21AQ8NDW8 1320 aa30.32■■■□□ 2.44
KLC1-221ENST00000556986 GCP02774 474 aa30.31■■■□□ 2.44
KLC1-221ENST00000556986 NLRP6P59044 892 aa30.31■■■□□ 2.44
KLC1-221ENST00000556986 TMC1Q8TDI8 760 aa30.31■■■□□ 2.44
KLC1-221ENST00000556986 PRDM11Q9NQV5 511 aa30.31■■■□□ 2.44
KLC1-221ENST00000556986 BTG4Q9NY30 223 aa30.31■■■□□ 2.44
KLC1-221ENST00000556986 CPDO75976 1380 aa30.3■■■□□ 2.44
KLC1-221ENST00000556986 ZC3H6P61129 1189 aaKnown RBP30.3■■■□□ 2.44
KLC1-221ENST00000556986 TMF1P82094 1093 aa30.3■■■□□ 2.44
KLC1-221ENST00000556986 NINLQ9Y2I6 1382 aa30.29■■■□□ 2.44
KLC1-221ENST00000556986 LMO7Q8WWI1 1683 aa30.27■■■□□ 2.44
KLC1-221ENST00000556986 USP54Q70EL1 1684 aa30.27■■■□□ 2.44
KLC1-221ENST00000556986 CHRNA2Q15822 529 aa30.26■■■□□ 2.43
KLC1-221ENST00000556986 HDGFL2Q7Z4V5 671 aaPredicted RBP30.26■■■□□ 2.43
KLC1-221ENST00000556986 A0A1W2PP64 1363 aa30.26■■■□□ 2.43
KLC1-221ENST00000556986 TERF2IPQ9NYB0 399 aa30.25■■■□□ 2.43
KLC1-221ENST00000556986 EDC4Q6P2E9 1401 aaKnown RBP30.24■■■□□ 2.43
KLC1-221ENST00000556986 ONECUT3O60422 494 aaPredicted RBP30.22■■■□□ 2.43
KLC1-221ENST00000556986 USP31Q70CQ4 1352 aa30.22■■■□□ 2.43
KLC1-221ENST00000556986 CAMTA1Q9Y6Y1 1673 aa30.22■■■□□ 2.43
KLC1-221ENST00000556986 COL18A1P39060 1754 aa30.2■■■□□ 2.43
KLC1-221ENST00000556986 BRWD3Q6RI45 1802 aa30.2■■■□□ 2.43
KLC1-221ENST00000556986 CDCA8Q53HL2 280 aa30.2■■■□□ 2.43
KLC1-221ENST00000556986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.2■■■□□ 2.43
KLC1-221ENST00000556986 CCDC9Q9Y3X0 531 aaKnown RBP30.18■■■□□ 2.42
KLC1-221ENST00000556986 SPATA31A5Q5VU36 1347 aa30.18■■■□□ 2.42
KLC1-221ENST00000556986 SPATA31A7Q8IWB4 1347 aa30.18■■■□□ 2.42
KLC1-221ENST00000556986 ANKRD36BQ8N2N9 1353 aa30.17■■■□□ 2.42
KLC1-221ENST00000556986 NME9Q86XW9 330 aa30.17■■■□□ 2.42
KLC1-221ENST00000556986 UPF1Q92900 1129 aaKnown RBP eCLIP30.17■■■□□ 2.42
KLC1-221ENST00000556986 ZRANB1Q9UGI0 708 aa30.17■■■□□ 2.42
KLC1-221ENST00000556986 MYOM1P52179 1685 aa30.17■■■□□ 2.42
KLC1-221ENST00000556986 NFAT5O94916 1531 aa30.17■■■□□ 2.42
KLC1-221ENST00000556986 EIF4G2P78344 907 aaKnown RBP eCLIP30.16■■■□□ 2.42
KLC1-221ENST00000556986 KCNH5Q8NCM2 988 aa30.16■■■□□ 2.42
KLC1-221ENST00000556986 AATKQ6ZMQ8 1374 aa30.15■■■□□ 2.42
KLC1-221ENST00000556986 HSPA5P11021 654 aaKnown RBP30.14■■■□□ 2.42
KLC1-221ENST00000556986 ARHGEF25Q86VW2 580 aa30.14■■■□□ 2.42
KLC1-221ENST00000556986 SEPT12Q8IYM1 358 aa30.12■■■□□ 2.41
KLC1-221ENST00000556986 RGPD5Q99666 1765 aa30.12■■■□□ 2.41
KLC1-221ENST00000556986 STRN4Q9NRL3 753 aa30.11■■■□□ 2.41
KLC1-221ENST00000556986 SPATA31A1Q5TZJ5 1347 aa30.11■■■□□ 2.41
KLC1-221ENST00000556986 COL5A2P05997 1499 aaPredicted RBP30.11■■■□□ 2.41
KLC1-221ENST00000556986 OVOS2A0A0J9YW53 1432 aa30.1■■■□□ 2.41
KLC1-221ENST00000556986 OVOS2Q6IE36 1432 aa30.1■■■□□ 2.41
KLC1-221ENST00000556986 EVA1CP58658 441 aa30.09■■■□□ 2.41
KLC1-221ENST00000556986 THSD7AQ9UPZ6 1657 aa30.09■■■□□ 2.41
KLC1-221ENST00000556986 EP400Q96L91 3159 aa30.08■■■□□ 2.41
KLC1-221ENST00000556986 FAM98CQ17RN3 349 aaKnown RBP30.08■■■□□ 2.41
KLC1-221ENST00000556986 LARP1Q6PKG0 1096 aaKnown RBP30.07■■■□□ 2.4
KLC1-221ENST00000556986 AXIN2Q9Y2T1 843 aa30.07■■■□□ 2.4
KLC1-221ENST00000556986 LTN1O94822 1766 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms