RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CCER1Q8TC90 406 aaPredicted RBP14.74□□□□□ -0.05
SNX6-208ENST00000556712 HAP1P54257 671 aaPredicted RBP14.73□□□□□ -0.05
SNX6-208ENST00000556712 NRKQ7Z2Y5 1582 aa14.73□□□□□ -0.05
SNX6-208ENST00000556712 PLEKHG3A1L390 1219 aa14.72□□□□□ -0.05
SNX6-208ENST00000556712 BCL9LQ86UU0 1499 aa14.71□□□□□ -0.05
SNX6-208ENST00000556712 CABP1Q9NZU7 370 aa14.71□□□□□ -0.05
SNX6-208ENST00000556712 USP21Q9UK80 565 aa14.71□□□□□ -0.05
SNX6-208ENST00000556712 MON2Q7Z3U7 1717 aa14.71□□□□□ -0.05
SNX6-208ENST00000556712 NRAPQ86VF7 1730 aa14.71□□□□□ -0.05
SNX6-208ENST00000556712 NWD2Q9ULI1 1742 aa14.71□□□□□ -0.05
SNX6-208ENST00000556712 SLIT2O94813 1529 aa14.71□□□□□ -0.06
SNX6-208ENST00000556712 PIK3C2AO00443 1686 aa14.71□□□□□ -0.06
SNX6-208ENST00000556712 RGS12O14924 1447 aa14.7□□□□□ -0.06
SNX6-208ENST00000556712 ATRNO75882 1429 aa14.7□□□□□ -0.06
SNX6-208ENST00000556712 USP6P35125 1406 aa14.7□□□□□ -0.06
SNX6-208ENST00000556712 NUTM2GQ5VZR2 741 aa14.7□□□□□ -0.06
SNX6-208ENST00000556712 FNBP4Q8N3X1 1017 aaPredicted RBP14.7□□□□□ -0.06
SNX6-208ENST00000556712 USP47Q96K76 1375 aa14.7□□□□□ -0.06
SNX6-208ENST00000556712 COL14A1Q05707 1796 aaKnown RBP14.7□□□□□ -0.06
SNX6-208ENST00000556712 RXRBP28702 533 aa14.69□□□□□ -0.06
SNX6-208ENST00000556712 QTRT2Q9H974 415 aaKnown RBP14.69□□□□□ -0.06
SNX6-208ENST00000556712 ATAD2Q6PL18 1390 aa14.69□□□□□ -0.06
SNX6-208ENST00000556712 ST20-MTHFSA0A0A6YYL1 179 aa14.68□□□□□ -0.06
SNX6-208ENST00000556712 GLI3P10071 1580 aa14.68□□□□□ -0.06
SNX6-208ENST00000556712 CDK12Q9NYV4 1490 aaPredicted RBP14.67□□□□□ -0.06
SNX6-208ENST00000556712 CD163L1Q9NR16 1453 aa14.66□□□□□ -0.06
SNX6-208ENST00000556712 TESK2Q96S53 571 aa14.66□□□□□ -0.06
SNX6-208ENST00000556712 TRPC5Q9UL62 973 aaPredicted RBP14.66□□□□□ -0.06
SNX6-208ENST00000556712 RBM6P78332 1123 aaKnown RBP14.65□□□□□ -0.06
SNX6-208ENST00000556712 ABTB2Q8N961 1025 aa14.65□□□□□ -0.06
SNX6-208ENST00000556712 TIMELESSQ9UNS1 1208 aa14.65□□□□□ -0.06
SNX6-208ENST00000556712 CPSF1Q10570 1443 aaKnown RBP14.65□□□□□ -0.06
SNX6-208ENST00000556712 SSH2Q76I76 1423 aa14.65□□□□□ -0.06
SNX6-208ENST00000556712 FAM83GA6ND36 823 aa14.64□□□□□ -0.07
SNX6-208ENST00000556712 KIAA0232Q92628 1395 aa14.63□□□□□ -0.07
SNX6-208ENST00000556712 SLIT3O75094 1523 aa14.63□□□□□ -0.07
SNX6-208ENST00000556712 UNC5CLQ8IV45 518 aa14.63□□□□□ -0.07
SNX6-208ENST00000556712 USP19O94966 1318 aa14.63□□□□□ -0.07
SNX6-208ENST00000556712 BRD4O60885 1362 aaPredicted RBP14.62□□□□□ -0.07
SNX6-208ENST00000556712 KTN1Q86UP2 1357 aaKnown RBP14.62□□□□□ -0.07
SNX6-208ENST00000556712 TMC1Q8TDI8 760 aa14.62□□□□□ -0.07
SNX6-208ENST00000556712 MYOM1P52179 1685 aa14.61□□□□□ -0.07
SNX6-208ENST00000556712 LMO7Q8WWI1 1683 aa14.61□□□□□ -0.07
SNX6-208ENST00000556712 ZC3H6P61129 1189 aaKnown RBP14.61□□□□□ -0.07
SNX6-208ENST00000556712 CHRNA2Q15822 529 aa14.61□□□□□ -0.07
SNX6-208ENST00000556712 PRDM11Q9NQV5 511 aa14.61□□□□□ -0.07
SNX6-208ENST00000556712 BRWD3Q6RI45 1802 aa14.61□□□□□ -0.07
SNX6-208ENST00000556712 USP54Q70EL1 1684 aa14.61□□□□□ -0.07
SNX6-208ENST00000556712 A0A1W2PP64 1363 aa14.6□□□□□ -0.07
SNX6-208ENST00000556712 SLC12A5Q9H2X9 1139 aa14.6□□□□□ -0.07
SNX6-208ENST00000556712 BTG4Q9NY30 223 aa14.6□□□□□ -0.07
SNX6-208ENST00000556712 TTC21BQ7Z4L5 1316 aa14.6□□□□□ -0.07
SNX6-208ENST00000556712 NLRP6P59044 892 aa14.59□□□□□ -0.07
SNX6-208ENST00000556712 GJD4Q96KN9 370 aaPredicted RBP14.59□□□□□ -0.07
SNX6-208ENST00000556712 VPS72Q15906 364 aa14.58□□□□□ -0.08
SNX6-208ENST00000556712 NLRP13Q86W25 1043 aa14.58□□□□□ -0.08
SNX6-208ENST00000556712 CCDC9Q9Y3X0 531 aaKnown RBP14.58□□□□□ -0.08
SNX6-208ENST00000556712 CAMTA1Q9Y6Y1 1673 aa14.58□□□□□ -0.08
SNX6-208ENST00000556712 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
SNX6-208ENST00000556712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
SNX6-208ENST00000556712 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
SNX6-208ENST00000556712 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
SNX6-208ENST00000556712 CPDO75976 1380 aa14.57□□□□□ -0.08
SNX6-208ENST00000556712 NFAT5O94916 1531 aa14.56□□□□□ -0.08
SNX6-208ENST00000556712 COL18A1P39060 1754 aa14.56□□□□□ -0.08
SNX6-208ENST00000556712 RGPD5Q99666 1765 aa14.56□□□□□ -0.08
SNX6-208ENST00000556712 GCP02774 474 aa14.56□□□□□ -0.08
SNX6-208ENST00000556712 TMF1P82094 1093 aa14.56□□□□□ -0.08
SNX6-208ENST00000556712 TTC21AQ8NDW8 1320 aa14.56□□□□□ -0.08
SNX6-208ENST00000556712 EDC4Q6P2E9 1401 aaKnown RBP14.56□□□□□ -0.08
SNX6-208ENST00000556712 LTN1O94822 1766 aa14.55□□□□□ -0.08
SNX6-208ENST00000556712 SOX12O15370 315 aa14.55□□□□□ -0.08
SNX6-208ENST00000556712 HDGFL2Q7Z4V5 671 aaPredicted RBP14.55□□□□□ -0.08
SNX6-208ENST00000556712 NME9Q86XW9 330 aa14.55□□□□□ -0.08
SNX6-208ENST00000556712 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
SNX6-208ENST00000556712 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
SNX6-208ENST00000556712 NINLQ9Y2I6 1382 aa14.55□□□□□ -0.08
SNX6-208ENST00000556712 THSD7AQ9UPZ6 1657 aa14.54□□□□□ -0.08
SNX6-208ENST00000556712 KIF20BQ96Q89 1820 aa14.53□□□□□ -0.08
SNX6-208ENST00000556712 COL5A2P05997 1499 aaPredicted RBP14.53□□□□□ -0.08
SNX6-208ENST00000556712 TERF2IPQ9NYB0 399 aa14.53□□□□□ -0.08
SNX6-208ENST00000556712 OVOS2A0A0J9YW53 1432 aa14.52□□□□□ -0.08
SNX6-208ENST00000556712 OVOS2Q6IE36 1432 aa14.52□□□□□ -0.08
SNX6-208ENST00000556712 ANKRD36BQ8N2N9 1353 aa14.52□□□□□ -0.08
SNX6-208ENST00000556712 UPF1Q92900 1129 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNX6-208ENST00000556712 USP31Q70CQ4 1352 aa14.51□□□□□ -0.09
SNX6-208ENST00000556712 SPATA31A5Q5VU36 1347 aa14.51□□□□□ -0.09
SNX6-208ENST00000556712 SPATA31A7Q8IWB4 1347 aa14.51□□□□□ -0.09
SNX6-208ENST00000556712 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
SNX6-208ENST00000556712 HSPA5P11021 654 aaKnown RBP14.51□□□□□ -0.09
SNX6-208ENST00000556712 FAM98CQ17RN3 349 aaKnown RBP14.51□□□□□ -0.09
SNX6-208ENST00000556712 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
SNX6-208ENST00000556712 A0A0G2JS52 829 aa14.5□□□□□ -0.09
SNX6-208ENST00000556712 MYT1Q01538 1121 aa14.5□□□□□ -0.09
SNX6-208ENST00000556712 SEPT12Q8IYM1 358 aa14.5□□□□□ -0.09
SNX6-208ENST00000556712 EIF4G2P78344 907 aaKnown RBP eCLIP14.49□□□□□ -0.09
SNX6-208ENST00000556712 LARP1Q6PKG0 1096 aaKnown RBP14.49□□□□□ -0.09
SNX6-208ENST00000556712 USP35Q9P2H5 1018 aa14.49□□□□□ -0.09
SNX6-208ENST00000556712 AATKQ6ZMQ8 1374 aa14.48□□□□□ -0.09
SNX6-208ENST00000556712 SPATA31A1Q5TZJ5 1347 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms