RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 GLI3P10071 1580 aa15.19■□□□□ 0.02
SPTLC2-205ENST00000556607 QRICH2Q9H0J4 1663 aa15.19■□□□□ 0.02
SPTLC2-205ENST00000556607 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-205ENST00000556607 BRWD3Q6RI45 1802 aa15.18■□□□□ 0.02
SPTLC2-205ENST00000556607 NUTM2GQ5VZR2 741 aa15.18■□□□□ 0.02
SPTLC2-205ENST00000556607 BTG4Q9NY30 223 aa15.18■□□□□ 0.02
SPTLC2-205ENST00000556607 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
SPTLC2-205ENST00000556607 TOPAZ1Q8N9V7 1692 aa15.17■□□□□ 0.02
SPTLC2-205ENST00000556607 VPS72Q15906 364 aa15.17■□□□□ 0.02
SPTLC2-205ENST00000556607 ACEP12821 1306 aa15.17■□□□□ 0.02
SPTLC2-205ENST00000556607 COL14A1Q05707 1796 aaKnown RBP15.16■□□□□ 0.02
SPTLC2-205ENST00000556607 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
SPTLC2-205ENST00000556607 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
SPTLC2-205ENST00000556607 TRPM1Q7Z4N2 1603 aa15.15■□□□□ 0.02
SPTLC2-205ENST00000556607 NBPF8Q3BBV2 869 aa15.15■□□□□ 0.02
SPTLC2-205ENST00000556607 PRDM11Q9NQV5 511 aa15.15■□□□□ 0.02
SPTLC2-205ENST00000556607 CRYBG1Q9Y4K1 1723 aa15.14■□□□□ 0.01
SPTLC2-205ENST00000556607 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
SPTLC2-205ENST00000556607 NRAPQ86VF7 1730 aa15.14■□□□□ 0.01
SPTLC2-205ENST00000556607 PHRF1Q9P1Y6 1649 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-205ENST00000556607 ROCK2O75116 1388 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-205ENST00000556607 ZC3H6P61129 1189 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-205ENST00000556607 CCDC125Q86Z20 511 aa15.13■□□□□ 0.01
SPTLC2-205ENST00000556607 ABTB2Q8N961 1025 aa15.13■□□□□ 0.01
SPTLC2-205ENST00000556607 PLEKHG3A1L390 1219 aa15.12■□□□□ 0.01
SPTLC2-205ENST00000556607 SF3B2Q13435 895 aaKnown RBP15.12■□□□□ 0.01
SPTLC2-205ENST00000556607 CHRNA2Q15822 529 aa15.12■□□□□ 0.01
SPTLC2-205ENST00000556607 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
SPTLC2-205ENST00000556607 POLR3AO14802 1390 aaPredicted RBP15.11■□□□□ 0.01
SPTLC2-205ENST00000556607 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
SPTLC2-205ENST00000556607 STRN4Q9NRL3 753 aa15.11■□□□□ 0.01
SPTLC2-205ENST00000556607 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
SPTLC2-205ENST00000556607 CABP1Q9NZU7 370 aa15.1■□□□□ 0.01
SPTLC2-205ENST00000556607 EVC2Q86UK5 1308 aa15.1■□□□□ 0.01
SPTLC2-205ENST00000556607 ZBTB7CA1YPR0 619 aa15.09■□□□□ 0.01
SPTLC2-205ENST00000556607 EVA1CP58658 441 aa15.09■□□□□ 0.01
SPTLC2-205ENST00000556607 NLRP13Q86W25 1043 aa15.09■□□□□ 0.01
SPTLC2-205ENST00000556607 ONECUT3O60422 494 aaPredicted RBP15.08■□□□□ 0
SPTLC2-205ENST00000556607 USP35Q9P2H5 1018 aa15.07■□□□□ 0
SPTLC2-205ENST00000556607 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
SPTLC2-205ENST00000556607 TONSLQ96HA7 1378 aa15.07■□□□□ 0
SPTLC2-205ENST00000556607 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
SPTLC2-205ENST00000556607 SPATA31A5Q5VU36 1347 aa15.06■□□□□ 0
SPTLC2-205ENST00000556607 SPATA31A7Q8IWB4 1347 aa15.06■□□□□ 0
SPTLC2-205ENST00000556607 NLRP6P59044 892 aa15.05■□□□□ -0
SPTLC2-205ENST00000556607 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ -0
SPTLC2-205ENST00000556607 CARD11Q9BXL7 1154 aa15.05■□□□□ -0
SPTLC2-205ENST00000556607 NRKQ7Z2Y5 1582 aa15.05■□□□□ -0
SPTLC2-205ENST00000556607 FAM182BQ5T319 152 aa15.04■□□□□ -0
SPTLC2-205ENST00000556607 DEFB132Q7Z7B7 95 aa15.04■□□□□ -0
SPTLC2-205ENST00000556607 USP6P35125 1406 aa15.03■□□□□ -0
SPTLC2-205ENST00000556607 GCP02774 474 aa15.03■□□□□ -0
SPTLC2-205ENST00000556607 EP400Q96L91 3159 aa15.02■□□□□ -0
SPTLC2-205ENST00000556607 BRD4O60885 1362 aaPredicted RBP15.02■□□□□ -0
SPTLC2-205ENST00000556607 SPATA31A1Q5TZJ5 1347 aa15.02■□□□□ -0
SPTLC2-205ENST00000556607 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
SPTLC2-205ENST00000556607 AKAP12Q02952 1782 aa15.01□□□□□ -0.01
SPTLC2-205ENST00000556607 USP19O94966 1318 aa15□□□□□ -0.01
SPTLC2-205ENST00000556607 SOX12O15370 315 aa15□□□□□ -0.01
SPTLC2-205ENST00000556607 BAG6P46379 1132 aa15□□□□□ -0.01
SPTLC2-205ENST00000556607 SSH2Q76I76 1423 aa15□□□□□ -0.01
SPTLC2-205ENST00000556607 CAMTA1Q9Y6Y1 1673 aa15□□□□□ -0.01
SPTLC2-205ENST00000556607 LARP1Q6PKG0 1096 aaKnown RBP14.99□□□□□ -0.01
SPTLC2-205ENST00000556607 TMC1Q8TDI8 760 aa14.99□□□□□ -0.01
SPTLC2-205ENST00000556607 RGPD1P0DJD0 1748 aa14.99□□□□□ -0.01
SPTLC2-205ENST00000556607 THSD7AQ9UPZ6 1657 aa14.99□□□□□ -0.01
SPTLC2-205ENST00000556607 CPDO75976 1380 aa14.98□□□□□ -0.01
SPTLC2-205ENST00000556607 PIK3C2AO00443 1686 aa14.98□□□□□ -0.01
SPTLC2-205ENST00000556607 PDE3BQ13370 1112 aa14.98□□□□□ -0.01
SPTLC2-205ENST00000556607 KTN1Q86UP2 1357 aaKnown RBP14.98□□□□□ -0.01
SPTLC2-205ENST00000556607 LMO7Q8WWI1 1683 aa14.97□□□□□ -0.01
SPTLC2-205ENST00000556607 TCP11L2Q8N4U5 519 aa14.97□□□□□ -0.01
SPTLC2-205ENST00000556607 TTC21BQ7Z4L5 1316 aa14.96□□□□□ -0.01
SPTLC2-205ENST00000556607 EN1Q05925 392 aaPredicted RBP14.95□□□□□ -0.02
SPTLC2-205ENST00000556607 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
SPTLC2-205ENST00000556607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.95□□□□□ -0.02
SPTLC2-205ENST00000556607 KCNH5Q8NCM2 988 aa14.95□□□□□ -0.02
SPTLC2-205ENST00000556607 SLIT3O75094 1523 aa14.95□□□□□ -0.02
SPTLC2-205ENST00000556607 RGPD5Q99666 1765 aa14.95□□□□□ -0.02
SPTLC2-205ENST00000556607 TTC21AQ8NDW8 1320 aa14.94□□□□□ -0.02
SPTLC2-205ENST00000556607 TRIM37O94972 964 aa14.94□□□□□ -0.02
SPTLC2-205ENST00000556607 FAM196AQ6ZSG2 479 aa14.94□□□□□ -0.02
SPTLC2-205ENST00000556607 TOM1L2Q6ZVM7 507 aa14.94□□□□□ -0.02
SPTLC2-205ENST00000556607 THRAP3Q9Y2W1 955 aaKnown RBP14.94□□□□□ -0.02
SPTLC2-205ENST00000556607 COL5A2P05997 1499 aaPredicted RBP14.94□□□□□ -0.02
SPTLC2-205ENST00000556607 MON2Q7Z3U7 1717 aa14.93□□□□□ -0.02
SPTLC2-205ENST00000556607 CSB-PGBD3P0DP91 1061 aa14.93□□□□□ -0.02
SPTLC2-205ENST00000556607 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
SPTLC2-205ENST00000556607 CRB1P82279 1406 aa14.92□□□□□ -0.02
SPTLC2-205ENST00000556607 AATKQ6ZMQ8 1374 aa14.92□□□□□ -0.02
SPTLC2-205ENST00000556607 SBNO2Q9Y2G9 1366 aa14.92□□□□□ -0.02
SPTLC2-205ENST00000556607 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
SPTLC2-205ENST00000556607 CPSF1Q10570 1443 aaKnown RBP14.92□□□□□ -0.02
SPTLC2-205ENST00000556607 PSDA5PKW4 1024 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-205ENST00000556607 APBA3O96018 575 aa14.91□□□□□ -0.02
SPTLC2-205ENST00000556607 SLC12A5Q9H2X9 1139 aa14.91□□□□□ -0.02
SPTLC2-205ENST00000556607 AXIN2Q9Y2T1 843 aa14.9□□□□□ -0.02
SPTLC2-205ENST00000556607 COL18A1P39060 1754 aa14.9□□□□□ -0.02
SPTLC2-205ENST00000556607 PARP4Q9UKK3 1724 aaKnown RBP14.89□□□□□ -0.03
SPTLC2-205ENST00000556607 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms