RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
CRX-203ENST00000556527 BRWD3Q6RI45 1802 aa14.29□□□□□ -0.12
CRX-203ENST00000556527 COL14A1Q05707 1796 aaKnown RBP14.28□□□□□ -0.12
CRX-203ENST00000556527 PRR36Q9H6K5 1346 aa14.28□□□□□ -0.12
CRX-203ENST00000556527 SPATA31A5Q5VU36 1347 aa14.26□□□□□ -0.13
CRX-203ENST00000556527 SPATA31A7Q8IWB4 1347 aa14.26□□□□□ -0.13
CRX-203ENST00000556527 TRPM3Q9HCF6 1732 aaPredicted RBP14.26□□□□□ -0.13
CRX-203ENST00000556527 PSDA5PKW4 1024 aaPredicted RBP14.25□□□□□ -0.13
CRX-203ENST00000556527 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
CRX-203ENST00000556527 STRN4Q9NRL3 753 aa14.25□□□□□ -0.13
CRX-203ENST00000556527 ALS2Q96Q42 1657 aa14.24□□□□□ -0.13
CRX-203ENST00000556527 EVA1CP58658 441 aa14.24□□□□□ -0.13
CRX-203ENST00000556527 FAM182BQ5T319 152 aa14.24□□□□□ -0.13
CRX-203ENST00000556527 NRAPQ86VF7 1730 aa14.24□□□□□ -0.13
CRX-203ENST00000556527 KIAA0232Q92628 1395 aa14.23□□□□□ -0.13
CRX-203ENST00000556527 EN1Q05925 392 aaPredicted RBP14.23□□□□□ -0.13
CRX-203ENST00000556527 NUTM2GQ5VZR2 741 aa14.23□□□□□ -0.13
CRX-203ENST00000556527 CDK19Q9BWU1 502 aa14.23□□□□□ -0.13
CRX-203ENST00000556527 ITSN1Q15811 1721 aa14.22□□□□□ -0.13
CRX-203ENST00000556527 ZC3H6P61129 1189 aaKnown RBP14.22□□□□□ -0.13
CRX-203ENST00000556527 CHRNA2Q15822 529 aa14.22□□□□□ -0.13
CRX-203ENST00000556527 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
CRX-203ENST00000556527 ATP7BP35670 1465 aa14.22□□□□□ -0.13
CRX-203ENST00000556527 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
CRX-203ENST00000556527 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
CRX-203ENST00000556527 HRCP23327 699 aa14.2□□□□□ -0.14
CRX-203ENST00000556527 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
CRX-203ENST00000556527 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
CRX-203ENST00000556527 ABTB2Q8N961 1025 aa14.2□□□□□ -0.14
CRX-203ENST00000556527 RGPD1P0DJD0 1748 aa14.2□□□□□ -0.14
CRX-203ENST00000556527 ACEP12821 1306 aa14.19□□□□□ -0.14
CRX-203ENST00000556527 SRPK2P78362 688 aaKnown RBP14.19□□□□□ -0.14
CRX-203ENST00000556527 R3HDM1Q15032 1099 aaKnown RBP14.19□□□□□ -0.14
CRX-203ENST00000556527 LRP5O75197 1615 aa14.19□□□□□ -0.14
CRX-203ENST00000556527 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
CRX-203ENST00000556527 TRIM37O94972 964 aa14.18□□□□□ -0.14
CRX-203ENST00000556527 NBPF8Q3BBV2 869 aa14.18□□□□□ -0.14
CRX-203ENST00000556527 APBA3O96018 575 aa14.17□□□□□ -0.14
CRX-203ENST00000556527 POLR3AO14802 1390 aaPredicted RBP14.17□□□□□ -0.14
CRX-203ENST00000556527 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
CRX-203ENST00000556527 EZH2Q15910 746 aaKnown RBP14.16□□□□□ -0.14
CRX-203ENST00000556527 NLRP13Q86W25 1043 aa14.16□□□□□ -0.14
CRX-203ENST00000556527 DISP2A7MBM2 1401 aa14.15□□□□□ -0.14
CRX-203ENST00000556527 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
CRX-203ENST00000556527 CRYBG1Q9Y4K1 1723 aa14.15□□□□□ -0.14
CRX-203ENST00000556527 PLEKHG3A1L390 1219 aa14.15□□□□□ -0.14
CRX-203ENST00000556527 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
CRX-203ENST00000556527 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
CRX-203ENST00000556527 PARD3Q8TEW0 1356 aa14.14□□□□□ -0.15
CRX-203ENST00000556527 BARGINQ6ZT62 677 aa14.14□□□□□ -0.15
CRX-203ENST00000556527 TCP11L2Q8N4U5 519 aa14.14□□□□□ -0.15
CRX-203ENST00000556527 CENPJQ9HC77 1338 aaPredicted RBP14.14□□□□□ -0.15
CRX-203ENST00000556527 NBPF14Q5TI25 921 aa14.13□□□□□ -0.15
CRX-203ENST00000556527 LARP1Q6PKG0 1096 aaKnown RBP14.13□□□□□ -0.15
CRX-203ENST00000556527 PPIP5K1Q6PFW1 1433 aa14.13□□□□□ -0.15
CRX-203ENST00000556527 CPDO75976 1380 aa14.12□□□□□ -0.15
CRX-203ENST00000556527 CAMKK2Q96RR4 588 aa14.12□□□□□ -0.15
CRX-203ENST00000556527 THRAP3Q9Y2W1 955 aaKnown RBP14.12□□□□□ -0.15
CRX-203ENST00000556527 TOPAZ1Q8N9V7 1692 aa14.11□□□□□ -0.15
CRX-203ENST00000556527 C11orf95C9JLR9 678 aaPredicted RBP14.11□□□□□ -0.15
CRX-203ENST00000556527 GCP02774 474 aa14.11□□□□□ -0.15
CRX-203ENST00000556527 NBPF1Q3BBV0 1214 aa14.11□□□□□ -0.15
CRX-203ENST00000556527 CABP2Q9NPB3 220 aa14.11□□□□□ -0.15
CRX-203ENST00000556527 TNS1Q9HBL0 1735 aaKnown RBP14.1□□□□□ -0.15
CRX-203ENST00000556527 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
CRX-203ENST00000556527 NRKQ7Z2Y5 1582 aa14.1□□□□□ -0.15
CRX-203ENST00000556527 USP19O94966 1318 aa14.1□□□□□ -0.15
CRX-203ENST00000556527 BRD4O60885 1362 aaPredicted RBP14.09□□□□□ -0.15
CRX-203ENST00000556527 NLRP6P59044 892 aa14.09□□□□□ -0.15
CRX-203ENST00000556527 CAMTA1Q9Y6Y1 1673 aa14.09□□□□□ -0.15
CRX-203ENST00000556527 CABP1Q9NZU7 370 aa14.08□□□□□ -0.16
CRX-203ENST00000556527 TOM1L2Q6ZVM7 507 aa14.07□□□□□ -0.16
CRX-203ENST00000556527 PPP1R1BQ9UD71 204 aaPredicted RBP14.07□□□□□ -0.16
CRX-203ENST00000556527 EVC2Q86UK5 1308 aa14.07□□□□□ -0.16
CRX-203ENST00000556527 CRB1P82279 1406 aa14.07□□□□□ -0.16
CRX-203ENST00000556527 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
CRX-203ENST00000556527 DCAF8L1A6NGE4 600 aa14.06□□□□□ -0.16
CRX-203ENST00000556527 DDB1Q16531 1140 aa14.05□□□□□ -0.16
CRX-203ENST00000556527 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
CRX-203ENST00000556527 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
CRX-203ENST00000556527 USP6P35125 1406 aa14.05□□□□□ -0.16
CRX-203ENST00000556527 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
CRX-203ENST00000556527 LMO7Q8WWI1 1683 aa14.04□□□□□ -0.16
CRX-203ENST00000556527 CSB-PGBD3P0DP91 1061 aa14.04□□□□□ -0.16
CRX-203ENST00000556527 AATKQ6ZMQ8 1374 aa14.04□□□□□ -0.16
CRX-203ENST00000556527 QRICH2Q9H0J4 1663 aa14.04□□□□□ -0.16
CRX-203ENST00000556527 SPON1Q9HCB6 807 aa14.03□□□□□ -0.16
CRX-203ENST00000556527 SOX12O15370 315 aa14.02□□□□□ -0.17
CRX-203ENST00000556527 KCNH5Q8NCM2 988 aa14.02□□□□□ -0.17
CRX-203ENST00000556527 CDCA7Q9BWT1 371 aaPredicted RBP14.02□□□□□ -0.17
CRX-203ENST00000556527 L3MBTL2Q969R5 705 aa14.01□□□□□ -0.17
CRX-203ENST00000556527 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
CRX-203ENST00000556527 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
CRX-203ENST00000556527 ROCK2O75116 1388 aaKnown RBP14□□□□□ -0.17
CRX-203ENST00000556527 WDR17Q8IZU2 1322 aa14□□□□□ -0.17
CRX-203ENST00000556527 RREB1Q92766 1687 aa14□□□□□ -0.17
CRX-203ENST00000556527 KCNQ2O43526 872 aa13.99□□□□□ -0.17
CRX-203ENST00000556527 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
CRX-203ENST00000556527 BCL11BQ9C0K0 894 aaPredicted RBP13.99□□□□□ -0.17
CRX-203ENST00000556527 SLIT3O75094 1523 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms