RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 RIC3Q7Z5B4 369 aa7.69□□□□□ -1.18
ATXN3-241ENST00000556374 EHBP1Q8NDI1 1231 aa7.69□□□□□ -1.18
ATXN3-241ENST00000556374 RSPH6AQ9H0K4 717 aa7.69□□□□□ -1.18
ATXN3-241ENST00000556374 J3QL48 77 aa7.68□□□□□ -1.18
ATXN3-241ENST00000556374 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-241ENST00000556374 C11orf95C9JLR9 678 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-241ENST00000556374 WFS1O76024 890 aa7.67□□□□□ -1.18
ATXN3-241ENST00000556374 HRCP23327 699 aa7.67□□□□□ -1.18
ATXN3-241ENST00000556374 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
ATXN3-241ENST00000556374 GMPR2Q9P2T1 348 aaKnown RBP7.67□□□□□ -1.18
ATXN3-241ENST00000556374 ZNF511Q8NB15 262 aa7.66□□□□□ -1.18
ATXN3-241ENST00000556374 ARMC2Q8NEN0 867 aa7.66□□□□□ -1.18
ATXN3-241ENST00000556374 ALDH1A1P00352 501 aa7.65□□□□□ -1.18
ATXN3-241ENST00000556374 F12P00748 615 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-241ENST00000556374 THOC2Q8NI27 1593 aaKnown RBP7.65□□□□□ -1.18
ATXN3-241ENST00000556374 TRIM47Q96LD4 638 aa7.65□□□□□ -1.18
ATXN3-241ENST00000556374 PCDHB15Q9Y5E8 787 aa7.65□□□□□ -1.18
ATXN3-241ENST00000556374 DCAF1Q9Y4B6 1507 aa7.64□□□□□ -1.19
ATXN3-241ENST00000556374 LILRB3O75022 631 aa7.64□□□□□ -1.19
ATXN3-241ENST00000556374 MYSM1Q5VVJ2 828 aa7.64□□□□□ -1.19
ATXN3-241ENST00000556374 HPS1Q92902 700 aa7.64□□□□□ -1.19
ATXN3-241ENST00000556374 WASF2Q9Y6W5 498 aa7.64□□□□□ -1.19
ATXN3-241ENST00000556374 CFAP99D6REC4 459 aa7.63□□□□□ -1.19
ATXN3-241ENST00000556374 SLC24A3Q9HC58 644 aa7.63□□□□□ -1.19
ATXN3-241ENST00000556374 FAM174AQ8TBP5 190 aa7.62□□□□□ -1.19
ATXN3-241ENST00000556374 BAP1Q92560 729 aa7.62□□□□□ -1.19
ATXN3-241ENST00000556374 GPKOWQ92917 476 aaPredicted RBP eCLIP7.62□□□□□ -1.19
ATXN3-241ENST00000556374 CDK15Q96Q40 435 aa7.62□□□□□ -1.19
ATXN3-241ENST00000556374 ZCCHC6Q5VYS8 1495 aaKnown RBP7.62□□□□□ -1.19
ATXN3-241ENST00000556374 NPAS3Q8IXF0 933 aa7.61□□□□□ -1.19
ATXN3-241ENST00000556374 HELBQ8NG08 1087 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-241ENST00000556374 CTHP32929 405 aa7.6□□□□□ -1.19
ATXN3-241ENST00000556374 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
ATXN3-241ENST00000556374 BPHLQ86WA6 291 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-241ENST00000556374 BCANQ96GW7 911 aa7.6□□□□□ -1.19
ATXN3-241ENST00000556374 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
ATXN3-241ENST00000556374 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
ATXN3-241ENST00000556374 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
ATXN3-241ENST00000556374 LIMD1Q9UGP4 676 aa7.59□□□□□ -1.19
ATXN3-241ENST00000556374 NUTM2BA6NNL0 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-241ENST00000556374 NUTM2EB1AL46 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-241ENST00000556374 CAPN5O15484 640 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-241ENST00000556374 INSM1Q01101 510 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-241ENST00000556374 NR5A1Q13285 461 aa7.58□□□□□ -1.2
ATXN3-241ENST00000556374 NBPF14Q5TI25 921 aa7.58□□□□□ -1.2
ATXN3-241ENST00000556374 NUTM2DQ5VT03 806 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-241ENST00000556374 NUTM2AQ8IVF1 878 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-241ENST00000556374 WIPF1O43516 503 aa7.57□□□□□ -1.2
ATXN3-241ENST00000556374 ADH1CP00326 375 aa7.57□□□□□ -1.2
ATXN3-241ENST00000556374 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
ATXN3-241ENST00000556374 QPCTQ16769 361 aa7.56□□□□□ -1.2
ATXN3-241ENST00000556374 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
ATXN3-241ENST00000556374 SH3D19Q5HYK7 790 aa7.56□□□□□ -1.2
ATXN3-241ENST00000556374 CABLES1Q8TDN4 633 aa7.56□□□□□ -1.2
ATXN3-241ENST00000556374 MAP4K5Q9Y4K4 846 aa7.56□□□□□ -1.2
ATXN3-241ENST00000556374 ZC3H4Q9UPT8 1303 aaKnown RBP7.55□□□□□ -1.2
ATXN3-241ENST00000556374 NNTQ13423 1086 aa7.55□□□□□ -1.2
ATXN3-241ENST00000556374 PPP2R2DQ66LE6 453 aa7.55□□□□□ -1.2
ATXN3-241ENST00000556374 SH3RF1Q7Z6J0 888 aa7.55□□□□□ -1.2
ATXN3-241ENST00000556374 TRMT44Q8IYL2 757 aaKnown RBP7.55□□□□□ -1.2
ATXN3-241ENST00000556374 C1QTNF2Q9BXJ5 285 aa7.55□□□□□ -1.2
ATXN3-241ENST00000556374 MAP10Q9P2G4 905 aa7.55□□□□□ -1.2
ATXN3-241ENST00000556374 TERTO14746 1132 aaKnown RBP7.54□□□□□ -1.2
ATXN3-241ENST00000556374 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
ATXN3-241ENST00000556374 KLF16Q9BXK1 252 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-241ENST00000556374 NESP48681 1621 aa7.53□□□□□ -1.2
ATXN3-241ENST00000556374 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
ATXN3-241ENST00000556374 CDV3Q9UKY7 258 aaKnown RBP7.53□□□□□ -1.2
ATXN3-241ENST00000556374 TLL2Q9Y6L7 1015 aa7.53□□□□□ -1.2
ATXN3-241ENST00000556374 SMARCA2P51531 1590 aa7.53□□□□□ -1.2
ATXN3-241ENST00000556374 BAZ1AQ9NRL2 1556 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-241ENST00000556374 KIF21AQ7Z4S6 1674 aa7.52□□□□□ -1.21
ATXN3-241ENST00000556374 PER1O15534 1290 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-241ENST00000556374 TIMP2P16035 220 aa7.52□□□□□ -1.21
ATXN3-241ENST00000556374 SCARF1Q14162 830 aa7.52□□□□□ -1.21
ATXN3-241ENST00000556374 CSPP1Q1MSJ5 1256 aa7.52□□□□□ -1.21
ATXN3-241ENST00000556374 SH3BP5LQ7L8J4 393 aa7.52□□□□□ -1.21
ATXN3-241ENST00000556374 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
ATXN3-241ENST00000556374 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-241ENST00000556374 GOPCQ9HD26 462 aa7.52□□□□□ -1.21
ATXN3-241ENST00000556374 RTL5Q5HYW3 569 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-241ENST00000556374 PDXDC2PQ6P474 469 aa7.51□□□□□ -1.21
ATXN3-241ENST00000556374 FOXJ1Q92949 421 aa7.51□□□□□ -1.21
ATXN3-241ENST00000556374 NXF1Q9UBU9 619 aaKnown RBP7.51□□□□□ -1.21
ATXN3-241ENST00000556374 GPSM3Q9Y4H4 160 aa7.51□□□□□ -1.21
ATXN3-241ENST00000556374 GRM5P41594 1212 aa7.5□□□□□ -1.21
ATXN3-241ENST00000556374 WDR4P57081 412 aaKnown RBP7.5□□□□□ -1.21
ATXN3-241ENST00000556374 AGERQ15109 404 aa7.5□□□□□ -1.21
ATXN3-241ENST00000556374 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
ATXN3-241ENST00000556374 MRPL14Q6P1L8 145 aaKnown RBP7.5□□□□□ -1.21
ATXN3-241ENST00000556374 KDM4CQ9H3R0 1056 aa7.5□□□□□ -1.21
ATXN3-241ENST00000556374 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
ATXN3-241ENST00000556374 PNMA1Q8ND90 353 aa7.49□□□□□ -1.21
ATXN3-241ENST00000556374 TSC1Q92574 1164 aa7.49□□□□□ -1.21
ATXN3-241ENST00000556374 NCAPD3P42695 1498 aa7.49□□□□□ -1.21
ATXN3-241ENST00000556374 HMGXB3Q12766 1538 aa7.48□□□□□ -1.21
ATXN3-241ENST00000556374 POLR3EQ9NVU0 708 aa7.48□□□□□ -1.21
ATXN3-241ENST00000556374 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
ATXN3-241ENST00000556374 TRIM52Q96A61 297 aa7.47□□□□□ -1.21
ATXN3-241ENST00000556374 ZFP42Q96MM3 310 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms