RNA–Protein interactions for RNA: ENST00000556321.1

PSMA3-210, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 500 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-210ENST00000556321 FOXD4L5Q5VV16 416 aaPredicted RBP8.39□□□□□ -1.07
PSMA3-210ENST00000556321 SND1Q7KZF4 910 aaKnown RBP eCLIP8.39□□□□□ -1.072e-11■■□□□ 12.7
PSMA3-210ENST00000556321 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
PSMA3-210ENST00000556321 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
PSMA3-210ENST00000556321 NBPF3Q9H094 633 aa8.39□□□□□ -1.07
PSMA3-210ENST00000556321 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
PSMA3-210ENST00000556321 ZC3H4Q9UPT8 1303 aaKnown RBP8.38□□□□□ -1.07
PSMA3-210ENST00000556321 RGS20O76081 388 aa8.38□□□□□ -1.07
PSMA3-210ENST00000556321 FBXO45P0C2W1 286 aa8.38□□□□□ -1.07
PSMA3-210ENST00000556321 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
PSMA3-210ENST00000556321 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
PSMA3-210ENST00000556321 ZBBXA8MT70 800 aa8.37□□□□□ -1.07
PSMA3-210ENST00000556321 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
PSMA3-210ENST00000556321 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
PSMA3-210ENST00000556321 ZFRQ96KR1 1074 aaKnown RBP8.37□□□□□ -1.07
PSMA3-210ENST00000556321 FKBPLQ9UIM3 349 aa8.37□□□□□ -1.07
PSMA3-210ENST00000556321 PUS10Q3MIT2 529 aaKnown RBP8.36□□□□□ -1.07
PSMA3-210ENST00000556321 PLEKHM2Q8IWE5 1019 aa8.36□□□□□ -1.07
PSMA3-210ENST00000556321 PRR14Q9BWN1 585 aa8.36□□□□□ -1.07
PSMA3-210ENST00000556321 ZMIZ1Q9ULJ6 1067 aa8.36□□□□□ -1.07
PSMA3-210ENST00000556321 AXIN2Q9Y2T1 843 aa8.36□□□□□ -1.07
PSMA3-210ENST00000556321 PIK3CDO00329 1044 aa8.35□□□□□ -1.07
PSMA3-210ENST00000556321 RNF40O75150 1001 aa8.35□□□□□ -1.07
PSMA3-210ENST00000556321 CCDC27Q2M243 656 aa8.35□□□□□ -1.07
PSMA3-210ENST00000556321 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
PSMA3-210ENST00000556321 USB1Q9BQ65 265 aaKnown RBP8.35□□□□□ -1.07
PSMA3-210ENST00000556321 AMOTL2Q9Y2J4 779 aa8.35□□□□□ -1.07
PSMA3-210ENST00000556321 TK2O00142 265 aa8.34□□□□□ -1.07
PSMA3-210ENST00000556321 BRICD5Q6PL45 260 aa8.34□□□□□ -1.07
PSMA3-210ENST00000556321 BLOC1S3Q6QNY0 202 aa8.34□□□□□ -1.07
PSMA3-210ENST00000556321 USP17L3A6NCW0 530 aa8.33□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L4A6NCW7 530 aa8.33□□□□□ -1.08
PSMA3-210ENST00000556321 PTPRNQ16849 979 aa8.33□□□□□ -1.08
PSMA3-210ENST00000556321 TMEM164Q5U3C3 297 aa8.33□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L1Q7RTZ2 530 aa8.33□□□□□ -1.08
PSMA3-210ENST00000556321 RBM25P49756 843 aaKnown RBP8.32□□□□□ -1.08
PSMA3-210ENST00000556321 ZNF428Q96B54 188 aa8.32□□□□□ -1.08
PSMA3-210ENST00000556321 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
PSMA3-210ENST00000556321 LRCH3Q96II8 777 aa8.32□□□□□ -1.08
PSMA3-210ENST00000556321 FAM196BA6NMK8 535 aa8.31□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L5A8MUK1 530 aa8.31□□□□□ -1.08
PSMA3-210ENST00000556321 JUNDP17535 347 aa8.31□□□□□ -1.08
PSMA3-210ENST00000556321 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
PSMA3-210ENST00000556321 FAM174AQ8TBP5 190 aa8.31□□□□□ -1.08
PSMA3-210ENST00000556321 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
PSMA3-210ENST00000556321 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.31□□□□□ -1.08
PSMA3-210ENST00000556321 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
PSMA3-210ENST00000556321 SKIP12755 728 aa8.3□□□□□ -1.08
PSMA3-210ENST00000556321 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
PSMA3-210ENST00000556321 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
PSMA3-210ENST00000556321 GPSM3Q9Y4H4 160 aa8.3□□□□□ -1.08
PSMA3-210ENST00000556321 FMNL1O95466 1100 aaPredicted RBP8.29□□□□□ -1.08
PSMA3-210ENST00000556321 MCCD1P59942 119 aaPredicted RBP8.29□□□□□ -1.08
PSMA3-210ENST00000556321 PHLDB3Q6NSJ2 640 aa8.29□□□□□ -1.08
PSMA3-210ENST00000556321 GPKOWQ92917 476 aaPredicted RBP eCLIP8.29□□□□□ -1.082e-8■■□□□ 13.9
PSMA3-210ENST00000556321 MAP10Q9P2G4 905 aa8.29□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L15C9J2P7 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L10C9JJH3 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L13C9JLJ4 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L12C9JPN9 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L11C9JVI0 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L21D6R901 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L18D6R9N7 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L22D6RA61 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L17D6RBQ6 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L19D6RCP7 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L20D6RJB6 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 USP17L24Q0WX57 530 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 SCUBE3Q8IX30 993 aa8.28□□□□□ -1.08
PSMA3-210ENST00000556321 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.09
PSMA3-210ENST00000556321 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.09
PSMA3-210ENST00000556321 PDXDC2PQ6P474 469 aa8.27□□□□□ -1.09
PSMA3-210ENST00000556321 PHTF2Q8N3S3 785 aa8.27□□□□□ -1.09
PSMA3-210ENST00000556321 CCER1Q8TC90 406 aaPredicted RBP8.27□□□□□ -1.09
PSMA3-210ENST00000556321 OCSTAMPQ9BR26 566 aa8.27□□□□□ -1.09
PSMA3-210ENST00000556321 CHIC2Q9UKJ5 165 aa8.27□□□□□ -1.09
PSMA3-210ENST00000556321 E9PSI1 815 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 ATP5J2-PTCD1G3V325 749 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 NR1I2O75469 434 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 SSFA2P28290 1259 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 PTK7Q13308 1070 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 MSS51Q4VC12 460 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 ARMC2Q8NEN0 867 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
PSMA3-210ENST00000556321 MKRN1Q9UHC7 482 aaKnown RBP8.26□□□□□ -1.09
PSMA3-210ENST00000556321 HRO43593 1189 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 DXOO77932 396 aaKnown RBP8.25□□□□□ -1.09
PSMA3-210ENST00000556321 CCNYL3P0C7X3 344 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 APLP1P51693 650 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 PTK2Q05397 1052 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 FAM69CQ0P6D2 419 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 DEPDC4Q8N2C3 294 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 CLP1Q92989 425 aaKnown RBP8.25□□□□□ -1.09
PSMA3-210ENST00000556321 EVA1BQ9NVM1 165 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 SLAIN2Q9P270 581 aa8.25□□□□□ -1.09
PSMA3-210ENST00000556321 SOWAHBA6NEL2 793 aa8.24□□□□□ -1.09
PSMA3-210ENST00000556321 NCOA4Q13772 614 aa8.24□□□□□ -1.09
PSMA3-210ENST00000556321 SLFNL1Q499Z3 407 aa8.24□□□□□ -1.09
PSMA3-210ENST00000556321 ADGRD1Q6QNK2 874 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms