RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
GTF2A1-204ENST00000556268 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
GTF2A1-204ENST00000556268 TRAPPC8Q9Y2L5 1435 aa14.61□□□□□ -0.07
GTF2A1-204ENST00000556268 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
GTF2A1-204ENST00000556268 MAP2K5Q13163 448 aa14.61□□□□□ -0.07
GTF2A1-204ENST00000556268 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
GTF2A1-204ENST00000556268 AGLP35573 1532 aa14.58□□□□□ -0.08
GTF2A1-204ENST00000556268 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
GTF2A1-204ENST00000556268 PHOX2BQ99453 314 aa14.57□□□□□ -0.08
GTF2A1-204ENST00000556268 CDC42BPBQ9Y5S2 1711 aa14.57□□□□□ -0.08
GTF2A1-204ENST00000556268 UHRF1BP1Q6BDS2 1440 aa14.57□□□□□ -0.08
GTF2A1-204ENST00000556268 DIP2CQ9Y2E4 1556 aa14.56□□□□□ -0.08
GTF2A1-204ENST00000556268 NLRP7Q8WX94 980 aa14.56□□□□□ -0.08
GTF2A1-204ENST00000556268 LRRIQ1Q96JM4 1722 aa14.55□□□□□ -0.08
GTF2A1-204ENST00000556268 ZC3H15Q8WU90 426 aaKnown RBP14.55□□□□□ -0.08
GTF2A1-204ENST00000556268 ESF1Q9H501 851 aaKnown RBP14.55□□□□□ -0.08
GTF2A1-204ENST00000556268 PTPRTO14522 1441 aa14.55□□□□□ -0.08
GTF2A1-204ENST00000556268 CCDC18Q5T9S5 1454 aa14.55□□□□□ -0.08
GTF2A1-204ENST00000556268 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
GTF2A1-204ENST00000556268 STRCQ7RTU9 1775 aa14.55□□□□□ -0.08
GTF2A1-204ENST00000556268 MINK1Q8N4C8 1332 aaPredicted RBP14.53□□□□□ -0.08
GTF2A1-204ENST00000556268 IRF6O14896 467 aa14.53□□□□□ -0.08
GTF2A1-204ENST00000556268 APLP1P51693 650 aa14.53□□□□□ -0.08
GTF2A1-204ENST00000556268 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
GTF2A1-204ENST00000556268 NECTIN2Q92692 538 aa14.53□□□□□ -0.08
GTF2A1-204ENST00000556268 BCANQ96GW7 911 aa14.53□□□□□ -0.08
GTF2A1-204ENST00000556268 ABCC1P33527 1531 aa14.52□□□□□ -0.08
GTF2A1-204ENST00000556268 GPATCH8Q9UKJ3 1502 aaKnown RBP14.52□□□□□ -0.08
GTF2A1-204ENST00000556268 CNTLNQ9NXG0 1405 aa14.52□□□□□ -0.08
GTF2A1-204ENST00000556268 CCDC102AQ96A19 550 aa14.52□□□□□ -0.09
GTF2A1-204ENST00000556268 ZMYM3Q14202 1370 aa14.51□□□□□ -0.09
GTF2A1-204ENST00000556268 ZNF777Q9ULD5 760 aaPredicted RBP14.51□□□□□ -0.09
GTF2A1-204ENST00000556268 ABCA6Q8N139 1617 aa14.51□□□□□ -0.09
GTF2A1-204ENST00000556268 KIAA1107Q9UPP5 1409 aa14.5□□□□□ -0.09
GTF2A1-204ENST00000556268 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
GTF2A1-204ENST00000556268 ZMYND10O75800 440 aa14.5□□□□□ -0.09
GTF2A1-204ENST00000556268 ITGBL1O95965 494 aaPredicted RBP14.5□□□□□ -0.09
GTF2A1-204ENST00000556268 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
GTF2A1-204ENST00000556268 KIDINS220Q9ULH0 1771 aa14.5□□□□□ -0.09
GTF2A1-204ENST00000556268 BARGINQ6ZT62 677 aa14.48□□□□□ -0.09
GTF2A1-204ENST00000556268 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
GTF2A1-204ENST00000556268 FYCO1Q9BQS8 1478 aa14.48□□□□□ -0.09
GTF2A1-204ENST00000556268 C3P01024 1663 aa14.48□□□□□ -0.09
GTF2A1-204ENST00000556268 NPATQ14207 1427 aa14.48□□□□□ -0.09
GTF2A1-204ENST00000556268 SAMD9LQ8IVG5 1584 aa14.47□□□□□ -0.09
GTF2A1-204ENST00000556268 SLC10A3P09131 477 aa14.47□□□□□ -0.09
GTF2A1-204ENST00000556268 DAXXQ9UER7 740 aaPredicted RBP14.47□□□□□ -0.09
GTF2A1-204ENST00000556268 ITSN2Q9NZM3 1697 aa14.46□□□□□ -0.09
GTF2A1-204ENST00000556268 NCOA1Q15788 1441 aa14.46□□□□□ -0.09
GTF2A1-204ENST00000556268 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.1
GTF2A1-204ENST00000556268 CFHP08603 1231 aa14.45□□□□□ -0.1
GTF2A1-204ENST00000556268 LTBP4Q8N2S1 1624 aa14.44□□□□□ -0.1
GTF2A1-204ENST00000556268 IFFO2Q5TF58 517 aa14.44□□□□□ -0.1
GTF2A1-204ENST00000556268 ILDR2Q71H61 639 aa14.43□□□□□ -0.1
GTF2A1-204ENST00000556268 KRI1Q8N9T8 703 aaKnown RBP14.43□□□□□ -0.1
GTF2A1-204ENST00000556268 MTRQ99707 1265 aa14.43□□□□□ -0.1
GTF2A1-204ENST00000556268 PRR14Q9BWN1 585 aa14.43□□□□□ -0.1
GTF2A1-204ENST00000556268 PLEKHH2Q8IVE3 1493 aa14.43□□□□□ -0.1
GTF2A1-204ENST00000556268 TJAP1Q5JTD0 557 aa14.42□□□□□ -0.1
GTF2A1-204ENST00000556268 CCNB3Q8WWL7 1395 aa14.42□□□□□ -0.1
GTF2A1-204ENST00000556268 ZNF644Q9H582 1327 aaPredicted RBP14.41□□□□□ -0.1
GTF2A1-204ENST00000556268 DDX11L8A8MPP1 907 aa14.41□□□□□ -0.1
GTF2A1-204ENST00000556268 KCNC4Q03721 635 aa14.41□□□□□ -0.1
GTF2A1-204ENST00000556268 GGT6Q6P531 493 aa14.41□□□□□ -0.1
GTF2A1-204ENST00000556268 IQSEC2Q5JU85 1478 aa14.41□□□□□ -0.1
GTF2A1-204ENST00000556268 PTPRKQ15262 1439 aa14.41□□□□□ -0.1
GTF2A1-204ENST00000556268 A2MP01023 1474 aa14.4□□□□□ -0.1
GTF2A1-204ENST00000556268 MDM2Q00987 491 aaPredicted RBP14.4□□□□□ -0.1
GTF2A1-204ENST00000556268 KMT5BQ4FZB7 885 aa14.4□□□□□ -0.1
GTF2A1-204ENST00000556268 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
GTF2A1-204ENST00000556268 MBD5Q9P267 1494 aa14.39□□□□□ -0.11
GTF2A1-204ENST00000556268 DISP3Q9P2K9 1392 aa14.39□□□□□ -0.11
GTF2A1-204ENST00000556268 RDH13Q8NBN7 331 aa14.39□□□□□ -0.11
GTF2A1-204ENST00000556268 MTUS2Q5JR59 1369 aa14.38□□□□□ -0.11
GTF2A1-204ENST00000556268 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
GTF2A1-204ENST00000556268 SULF1Q8IWU6 871 aa14.38□□□□□ -0.11
GTF2A1-204ENST00000556268 MROH2AA6NES4 1674 aa14.38□□□□□ -0.11
GTF2A1-204ENST00000556268 RTEL1-TNFRSF6BF6WH68 1400 aa14.38□□□□□ -0.11
GTF2A1-204ENST00000556268 PLXNC1O60486 1568 aa14.38□□□□□ -0.11
GTF2A1-204ENST00000556268 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
GTF2A1-204ENST00000556268 ATP7AQ04656 1500 aa14.37□□□□□ -0.11
GTF2A1-204ENST00000556268 SOCS7O14512 581 aa14.37□□□□□ -0.11
GTF2A1-204ENST00000556268 ACTN4O43707 911 aaKnown RBP14.37□□□□□ -0.11
GTF2A1-204ENST00000556268 COPS2P61201 443 aa14.37□□□□□ -0.11
GTF2A1-204ENST00000556268 IL21Q9HBE4 155 aa14.37□□□□□ -0.11
GTF2A1-204ENST00000556268 PCDHB3Q9Y5E6 796 aa14.37□□□□□ -0.11
GTF2A1-204ENST00000556268 DHX29Q7Z478 1369 aaKnown RBP14.36□□□□□ -0.11
GTF2A1-204ENST00000556268 PLA2R1Q13018 1463 aa14.35□□□□□ -0.11
GTF2A1-204ENST00000556268 ZNF335Q9H4Z2 1342 aaPredicted RBP14.35□□□□□ -0.11
GTF2A1-204ENST00000556268 INO80Q9ULG1 1556 aaPredicted RBP14.34□□□□□ -0.11
GTF2A1-204ENST00000556268 TCOF1Q13428 1488 aaKnown RBP14.34□□□□□ -0.11
GTF2A1-204ENST00000556268 A0A0G2JS52 829 aa14.34□□□□□ -0.11
GTF2A1-204ENST00000556268 BLOC1S3Q6QNY0 202 aa14.34□□□□□ -0.11
GTF2A1-204ENST00000556268 ZNF516Q92618 1163 aa14.34□□□□□ -0.11
GTF2A1-204ENST00000556268 SUPT6HQ7KZ85 1726 aaKnown RBP14.34□□□□□ -0.11
GTF2A1-204ENST00000556268 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
GTF2A1-204ENST00000556268 FBXO31Q5XUX0 539 aaPredicted RBP14.32□□□□□ -0.12
GTF2A1-204ENST00000556268 GPCPD1Q9NPB8 672 aa14.32□□□□□ -0.12
GTF2A1-204ENST00000556268 UBAP1LF5GYI3 381 aa14.31□□□□□ -0.12
GTF2A1-204ENST00000556268 KIF3BO15066 747 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms