RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 F12P00748 615 aaPredicted RBP6.99□□□□□ -1.29
SPTLC2-204ENST00000556264 APLP1P51693 650 aa6.99□□□□□ -1.29
SPTLC2-204ENST00000556264 ADGRD1Q6QNK2 874 aa6.99□□□□□ -1.29
SPTLC2-204ENST00000556264 GOLGA8CPA6NN73 597 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 NR1I2O75469 434 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 JUNDP17535 347 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 CTHP32929 405 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 ANKK1Q8NFD2 765 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 FOXD4L4Q8WXT5 416 aaPredicted RBP6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 THAP11Q96EK4 314 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 STAC3Q96MF2 364 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 HPS5Q9UPZ3 1129 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 PCDHB3Q9Y5E6 796 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 IVNS1ABPQ9Y6Y0 642 aa6.98□□□□□ -1.29
SPTLC2-204ENST00000556264 POTEB3A0JP26 581 aa6.97□□□□□ -1.29
SPTLC2-204ENST00000556264 SOWAHBA6NEL2 793 aa6.97□□□□□ -1.29
SPTLC2-204ENST00000556264 SKIP12755 728 aa6.97□□□□□ -1.29
SPTLC2-204ENST00000556264 PTPRNQ16849 979 aa6.97□□□□□ -1.29
SPTLC2-204ENST00000556264 POTEBQ6S5H4 581 aa6.97□□□□□ -1.29
SPTLC2-204ENST00000556264 NFATC2IPQ8NCF5 419 aa6.97□□□□□ -1.29
SPTLC2-204ENST00000556264 ZC3H4Q9UPT8 1303 aaKnown RBP6.97□□□□□ -1.29
SPTLC2-204ENST00000556264 USP17L3A6NCW0 530 aa6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L4A6NCW7 530 aa6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 BCAMP50895 628 aa6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 LSM11P83369 360 aaKnown RBP eCLIP6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L1Q7RTZ2 530 aa6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 HS3ST6Q96QI5 342 aa6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 TSR3Q9UJK0 312 aaKnown RBP6.96□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L5A8MUK1 530 aa6.95□□□□□ -1.3
SPTLC2-204ENST00000556264 HRO43593 1189 aa6.95□□□□□ -1.3
SPTLC2-204ENST00000556264 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
SPTLC2-204ENST00000556264 DEPDC4Q8N2C3 294 aa6.95□□□□□ -1.3
SPTLC2-204ENST00000556264 FAM174AQ8TBP5 190 aa6.95□□□□□ -1.3
SPTLC2-204ENST00000556264 PTK2Q05397 1052 aa6.94□□□□□ -1.3
SPTLC2-204ENST00000556264 TMEM164Q5U3C3 297 aa6.94□□□□□ -1.3
SPTLC2-204ENST00000556264 PLEKHM2Q8IWE5 1019 aa6.94□□□□□ -1.3
SPTLC2-204ENST00000556264 STK32AQ8WU08 396 aa6.94□□□□□ -1.3
SPTLC2-204ENST00000556264 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
SPTLC2-204ENST00000556264 ZMIZ1Q9ULJ6 1067 aa6.94□□□□□ -1.3
SPTLC2-204ENST00000556264 NOVA2Q9UNW9 492 aaKnown RBP6.94□□□□□ -1.3
SPTLC2-204ENST00000556264 CCNYL3P0C7X3 344 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 KCNH2Q12809 1159 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 SLFNL1Q499Z3 407 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 FAM160A2Q8N612 972 aaPredicted RBP6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 ARMC2Q8NEN0 867 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 WNT2BQ93097 391 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 ZNF428Q96B54 188 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 EVA1BQ9NVM1 165 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 MKRN1Q9UHC7 482 aaKnown RBP6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 PCDHB9Q9Y5E1 797 aa6.93□□□□□ -1.3
SPTLC2-204ENST00000556264 DXOO77932 396 aaKnown RBP6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 RBM25P49756 843 aaKnown RBP6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 MSS51Q4VC12 460 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 LHX8Q68G74 356 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 B4GALNT3Q6L9W6 998 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 PDXDC2PQ6P474 469 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 ANKRD13DQ6ZTN6 518 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 SND1Q7KZF4 910 aaKnown RBP eCLIP6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 FAM163AQ96GL9 167 aaPredicted RBP6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 SPSB2Q99619 263 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 NUDT12Q9BQG2 462 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 GPSM3Q9Y4H4 160 aa6.92□□□□□ -1.3
SPTLC2-204ENST00000556264 MCCD1P59942 119 aaPredicted RBP6.91□□□□□ -1.3
SPTLC2-204ENST00000556264 LARP1Q6PKG0 1096 aaKnown RBP6.91□□□□□ -1.3
SPTLC2-204ENST00000556264 RNF135Q8IUD6 432 aa6.91□□□□□ -1.3
SPTLC2-204ENST00000556264 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
SPTLC2-204ENST00000556264 WBP1LQ9NX94 342 aa6.91□□□□□ -1.3
SPTLC2-204ENST00000556264 FAM196BA6NMK8 535 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L12C9JPN9 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L21D6R901 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 RASA1P20936 1047 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 MMP16P51512 607 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 COPS2P61201 443 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 USP17L24Q0WX57 530 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 NCOA4Q13772 614 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 CRTC2Q53ET0 693 aaPredicted RBP6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 PHTF2Q8N3S3 785 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 ZNF592Q92610 1267 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 GPKOWQ92917 476 aaPredicted RBP eCLIP6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 GNEQ9Y223 722 aaKnown RBP6.9□□□□□ -1.3
SPTLC2-204ENST00000556264 PTK7Q13308 1070 aa6.89□□□□□ -1.31
SPTLC2-204ENST00000556264 NBPF14Q5TI25 921 aa6.89□□□□□ -1.31
SPTLC2-204ENST00000556264 PHLDB3Q6NSJ2 640 aa6.89□□□□□ -1.31
SPTLC2-204ENST00000556264 PLPP7Q8NBV4 271 aa6.89□□□□□ -1.31
SPTLC2-204ENST00000556264 FAM200AQ8TCP9 573 aa6.89□□□□□ -1.31
SPTLC2-204ENST00000556264 ARHGAP9Q9BRR9 750 aa6.89□□□□□ -1.31
SPTLC2-204ENST00000556264 ATP5J2-PTCD1G3V325 749 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms