RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 NR1I2O75469 434 aa9.42□□□□□ -0.9
HIF1A-208ENST00000556237 ADH1BP00325 375 aa9.42□□□□□ -0.9
HIF1A-208ENST00000556237 PRR20EP86478 221 aa9.42□□□□□ -0.9
HIF1A-208ENST00000556237 PRR20CP86479 221 aa9.42□□□□□ -0.9
HIF1A-208ENST00000556237 PRR20DP86480 221 aa9.42□□□□□ -0.9
HIF1A-208ENST00000556237 PRR20BP86481 221 aa9.42□□□□□ -0.9
HIF1A-208ENST00000556237 PRR20AP86496 221 aa9.42□□□□□ -0.9
HIF1A-208ENST00000556237 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
HIF1A-208ENST00000556237 DGAT1O75907 488 aa9.41□□□□□ -0.9
HIF1A-208ENST00000556237 SLC10A3P09131 477 aa9.41□□□□□ -0.9
HIF1A-208ENST00000556237 RBM26Q5T8P6 1007 aaKnown RBP9.41□□□□□ -0.9
HIF1A-208ENST00000556237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
HIF1A-208ENST00000556237 CHIC2Q9UKJ5 165 aa9.41□□□□□ -0.9
HIF1A-208ENST00000556237 HRCP23327 699 aa9.4□□□□□ -0.9
HIF1A-208ENST00000556237 ZNF697Q5TEC3 545 aa9.4□□□□□ -0.9
HIF1A-208ENST00000556237 LIAT1Q6ZQX7 453 aa9.4□□□□□ -0.9
HIF1A-208ENST00000556237 ZCCHC11Q5TAX3 1644 aaKnown RBP9.4□□□□□ -0.9
HIF1A-208ENST00000556237 ADCY10Q96PN6 1610 aa9.4□□□□□ -0.9
HIF1A-208ENST00000556237 KIF14Q15058 1648 aa9.39□□□□□ -0.91
HIF1A-208ENST00000556237 PTPN23Q9H3S7 1636 aa9.39□□□□□ -0.91
HIF1A-208ENST00000556237 OATP04181 439 aa9.39□□□□□ -0.91
HIF1A-208ENST00000556237 ABCC10Q5T3U5 1492 aa9.39□□□□□ -0.91
HIF1A-208ENST00000556237 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 HNRNPMP52272 730 aaKnown RBP eCLIP9.38□□□□□ -0.91
HIF1A-208ENST00000556237 MYT1Q01538 1121 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 EFCAB2Q5VUJ9 269 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 SMYD5Q6GMV2 418 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
HIF1A-208ENST00000556237 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 RRP7BPQ9NSQ0 103 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 TCOF1Q13428 1488 aaKnown RBP9.38□□□□□ -0.91
HIF1A-208ENST00000556237 ASXL2Q76L83 1435 aa9.38□□□□□ -0.91
HIF1A-208ENST00000556237 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
HIF1A-208ENST00000556237 RSPH4AQ5TD94 716 aa9.37□□□□□ -0.91
HIF1A-208ENST00000556237 SETD5Q9C0A6 1442 aa9.37□□□□□ -0.91
HIF1A-208ENST00000556237 TSPY4P0CV99 314 aa9.36□□□□□ -0.91
HIF1A-208ENST00000556237 TSPY10P0CW01 314 aa9.36□□□□□ -0.91
HIF1A-208ENST00000556237 PTPRKQ15262 1439 aa9.36□□□□□ -0.91
HIF1A-208ENST00000556237 WDR7Q9Y4E6 1490 aa9.35□□□□□ -0.91
HIF1A-208ENST00000556237 FAM187AA6NFU0 413 aa9.35□□□□□ -0.91
HIF1A-208ENST00000556237 TNFRSF10AO00220 468 aa9.35□□□□□ -0.91
HIF1A-208ENST00000556237 GDF9O60383 454 aa9.35□□□□□ -0.91
HIF1A-208ENST00000556237 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
HIF1A-208ENST00000556237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.35□□□□□ -0.91
HIF1A-208ENST00000556237 ABCC5O15440 1437 aa9.34□□□□□ -0.91
HIF1A-208ENST00000556237 PLCH2O75038 1416 aa9.34□□□□□ -0.91
HIF1A-208ENST00000556237 HIC1Q14526 733 aa9.34□□□□□ -0.91
HIF1A-208ENST00000556237 LMOD2Q6P5Q4 547 aa9.34□□□□□ -0.91
HIF1A-208ENST00000556237 GPR37O15354 613 aa9.33□□□□□ -0.92
HIF1A-208ENST00000556237 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
HIF1A-208ENST00000556237 METTL3Q86U44 580 aaKnown RBP9.33□□□□□ -0.92
HIF1A-208ENST00000556237 SPSB2Q99619 263 aa9.33□□□□□ -0.92
HIF1A-208ENST00000556237 RAB3GAP2Q9H2M9 1393 aa9.33□□□□□ -0.92
HIF1A-208ENST00000556237 CAMSAP2Q08AD1 1489 aa9.33□□□□□ -0.92
HIF1A-208ENST00000556237 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
HIF1A-208ENST00000556237 DAPK1P53355 1430 aa9.32□□□□□ -0.92
HIF1A-208ENST00000556237 PUS10Q3MIT2 529 aaKnown RBP9.32□□□□□ -0.92
HIF1A-208ENST00000556237 ARHGAP5Q13017 1502 aa9.31□□□□□ -0.92
HIF1A-208ENST00000556237 CDC42BPAQ5VT25 1732 aa9.31□□□□□ -0.92
HIF1A-208ENST00000556237 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
HIF1A-208ENST00000556237 TTC37Q6PGP7 1564 aa9.3□□□□□ -0.92
HIF1A-208ENST00000556237 FAM69CQ0P6D2 419 aa9.3□□□□□ -0.92
HIF1A-208ENST00000556237 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
HIF1A-208ENST00000556237 CDC42BPBQ9Y5S2 1711 aa9.29□□□□□ -0.92
HIF1A-208ENST00000556237 TULP1O00294 542 aaPredicted RBP9.29□□□□□ -0.92
HIF1A-208ENST00000556237 HFM1A2PYH4 1435 aa9.29□□□□□ -0.92
HIF1A-208ENST00000556237 NAIPQ13075 1403 aa9.29□□□□□ -0.92
HIF1A-208ENST00000556237 AKNAQ7Z591 1439 aa9.29□□□□□ -0.92
HIF1A-208ENST00000556237 PLEKHH2Q8IVE3 1493 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 ROCK1Q13464 1354 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 ANKRD30AQ9BXX3 1397 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 POTECB2RU33 542 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 AFAP1Q8N556 730 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 RDH13Q8NBN7 331 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 KIAA1107Q9UPP5 1409 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 MBD5Q9P267 1494 aa9.28□□□□□ -0.92
HIF1A-208ENST00000556237 PREX2Q70Z35 1606 aa9.27□□□□□ -0.92
HIF1A-208ENST00000556237 DHX57Q6P158 1386 aaKnown RBP9.27□□□□□ -0.93
HIF1A-208ENST00000556237 RPIAP49247 311 aa9.27□□□□□ -0.93
HIF1A-208ENST00000556237 GPIHBP1Q8IV16 184 aa9.27□□□□□ -0.93
HIF1A-208ENST00000556237 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
HIF1A-208ENST00000556237 DAXXQ9UER7 740 aaPredicted RBP9.27□□□□□ -0.93
HIF1A-208ENST00000556237 MYO5CQ9NQX4 1742 aa9.27□□□□□ -0.93
HIF1A-208ENST00000556237 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
HIF1A-208ENST00000556237 DNMT1P26358 1616 aaKnown RBP9.27□□□□□ -0.93
HIF1A-208ENST00000556237 SAMD9LQ8IVG5 1584 aa9.26□□□□□ -0.93
HIF1A-208ENST00000556237 NCOA1Q15788 1441 aa9.26□□□□□ -0.93
HIF1A-208ENST00000556237 GNPATO15228 680 aa9.26□□□□□ -0.93
HIF1A-208ENST00000556237 FOXC1Q12948 553 aa9.26□□□□□ -0.93
HIF1A-208ENST00000556237 MORN1Q5T089 497 aa9.26□□□□□ -0.93
HIF1A-208ENST00000556237 AAASQ9NRG9 546 aa9.26□□□□□ -0.93
HIF1A-208ENST00000556237 C9orf84Q5VXU9 1444 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 SCAPERQ9BY12 1400 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 ABCA9Q8IUA7 1624 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 ST8SIA5O15466 376 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 FECHP22830 423 aa9.25□□□□□ -0.93
HIF1A-208ENST00000556237 ZC3H15Q8WU90 426 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms