RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 SBNO1A3KN83 1393 aa15.96■□□□□ 0.15
CHGA-205ENST00000556098 PHRF1Q9P1Y6 1649 aaKnown RBP15.95■□□□□ 0.14
CHGA-205ENST00000556098 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
CHGA-205ENST00000556098 CFAP70Q5T0N1 1121 aa15.95■□□□□ 0.14
CHGA-205ENST00000556098 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
CHGA-205ENST00000556098 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
CHGA-205ENST00000556098 THSD7AQ9UPZ6 1657 aa15.94■□□□□ 0.14
CHGA-205ENST00000556098 GPRASP1Q5JY77 1395 aa15.92■□□□□ 0.14
CHGA-205ENST00000556098 NUP188Q5SRE5 1749 aa15.92■□□□□ 0.14
CHGA-205ENST00000556098 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
CHGA-205ENST00000556098 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
CHGA-205ENST00000556098 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
CHGA-205ENST00000556098 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
CHGA-205ENST00000556098 RREB1Q92766 1687 aa15.9■□□□□ 0.14
CHGA-205ENST00000556098 TRAK1Q9UPV9 953 aa15.9■□□□□ 0.14
CHGA-205ENST00000556098 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
CHGA-205ENST00000556098 C14orf93Q9H972 538 aaKnown RBP15.89■□□□□ 0.13
CHGA-205ENST00000556098 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
CHGA-205ENST00000556098 TRIM37O94972 964 aa15.88■□□□□ 0.13
CHGA-205ENST00000556098 NGDNQ8NEJ9 315 aaKnown RBP15.88■□□□□ 0.13
CHGA-205ENST00000556098 PRDM11Q9NQV5 511 aa15.88■□□□□ 0.13
CHGA-205ENST00000556098 USP35Q9P2H5 1018 aa15.88■□□□□ 0.13
CHGA-205ENST00000556098 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
CHGA-205ENST00000556098 TULP4Q9NRJ4 1543 aa15.88■□□□□ 0.13
CHGA-205ENST00000556098 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
CHGA-205ENST00000556098 SIRT1Q96EB6 747 aa15.86■□□□□ 0.13
CHGA-205ENST00000556098 SPATA31A5Q5VU36 1347 aa15.86■□□□□ 0.13
CHGA-205ENST00000556098 SPATA31A7Q8IWB4 1347 aa15.86■□□□□ 0.13
CHGA-205ENST00000556098 APBA3O96018 575 aa15.85■□□□□ 0.13
CHGA-205ENST00000556098 NUTM2GQ5VZR2 741 aa15.85■□□□□ 0.13
CHGA-205ENST00000556098 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
CHGA-205ENST00000556098 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
CHGA-205ENST00000556098 CAMTA1Q9Y6Y1 1673 aa15.83■□□□□ 0.13
CHGA-205ENST00000556098 ZC3H6P61129 1189 aaKnown RBP15.83■□□□□ 0.12
CHGA-205ENST00000556098 PRR36Q9H6K5 1346 aa15.83■□□□□ 0.12
CHGA-205ENST00000556098 KIAA0232Q92628 1395 aa15.83■□□□□ 0.12
CHGA-205ENST00000556098 EVA1CP58658 441 aa15.82■□□□□ 0.12
CHGA-205ENST00000556098 PPP1R1BQ9UD71 204 aaPredicted RBP15.82■□□□□ 0.12
CHGA-205ENST00000556098 ADGRB1O14514 1584 aa15.82■□□□□ 0.12
CHGA-205ENST00000556098 SBF2Q86WG5 1849 aa15.82■□□□□ 0.12
CHGA-205ENST00000556098 YY1P25490 414 aa15.81■□□□□ 0.12
CHGA-205ENST00000556098 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
CHGA-205ENST00000556098 TOPAZ1Q8N9V7 1692 aa15.8■□□□□ 0.12
CHGA-205ENST00000556098 SPATA31A1Q5TZJ5 1347 aa15.8■□□□□ 0.12
CHGA-205ENST00000556098 ZBTB7CA1YPR0 619 aa15.8■□□□□ 0.12
CHGA-205ENST00000556098 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
CHGA-205ENST00000556098 NRKQ7Z2Y5 1582 aa15.79■□□□□ 0.12
CHGA-205ENST00000556098 DISP2A7MBM2 1401 aa15.79■□□□□ 0.12
CHGA-205ENST00000556098 WASLO00401 505 aaPredicted RBP15.79■□□□□ 0.12
CHGA-205ENST00000556098 FAM196AQ6ZSG2 479 aa15.79■□□□□ 0.12
CHGA-205ENST00000556098 WNK3Q9BYP7 1800 aa15.78■□□□□ 0.12
CHGA-205ENST00000556098 CAMKK2Q96RR4 588 aa15.78■□□□□ 0.12
CHGA-205ENST00000556098 RGPD5Q99666 1765 aa15.77■□□□□ 0.12
CHGA-205ENST00000556098 PARP4Q9UKK3 1724 aaKnown RBP15.77■□□□□ 0.12
CHGA-205ENST00000556098 NBPF8Q3BBV2 869 aa15.77■□□□□ 0.12
CHGA-205ENST00000556098 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
CHGA-205ENST00000556098 TONSLQ96HA7 1378 aa15.76■□□□□ 0.11
CHGA-205ENST00000556098 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
CHGA-205ENST00000556098 DCAF11Q8TEB1 546 aa15.76■□□□□ 0.11
CHGA-205ENST00000556098 ATP7BP35670 1465 aa15.76■□□□□ 0.11
CHGA-205ENST00000556098 SSH2Q76I76 1423 aa15.75■□□□□ 0.11
CHGA-205ENST00000556098 LMO7Q8WWI1 1683 aa15.74■□□□□ 0.11
CHGA-205ENST00000556098 NUDT16Q96DE0 195 aaKnown RBP15.74■□□□□ 0.11
CHGA-205ENST00000556098 LARP1Q6PKG0 1096 aaKnown RBP15.73■□□□□ 0.11
CHGA-205ENST00000556098 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
CHGA-205ENST00000556098 LRRC37A3O60309 1634 aa15.72■□□□□ 0.11
CHGA-205ENST00000556098 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
CHGA-205ENST00000556098 MYOM1P52179 1685 aa15.71■□□□□ 0.11
CHGA-205ENST00000556098 ABTB2Q8N961 1025 aa15.71■□□□□ 0.11
CHGA-205ENST00000556098 RGPD3A6NKT7 1758 aaPredicted RBP15.71■□□□□ 0.11
CHGA-205ENST00000556098 RGPD4Q7Z3J3 1758 aa15.71■□□□□ 0.11
CHGA-205ENST00000556098 QRICH2Q9H0J4 1663 aa15.7■□□□□ 0.1
CHGA-205ENST00000556098 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
CHGA-205ENST00000556098 SPON1Q9HCB6 807 aa15.7■□□□□ 0.1
CHGA-205ENST00000556098 CHD4Q14839 1912 aa15.7■□□□□ 0.1
CHGA-205ENST00000556098 CASZ1Q86V15 1759 aa15.7■□□□□ 0.1
CHGA-205ENST00000556098 ACEP12821 1306 aa15.69■□□□□ 0.1
CHGA-205ENST00000556098 TCP11L2Q8N4U5 519 aa15.69■□□□□ 0.1
CHGA-205ENST00000556098 CDK19Q9BWU1 502 aa15.69■□□□□ 0.1
CHGA-205ENST00000556098 PEAK1Q9H792 1746 aa15.68■□□□□ 0.1
CHGA-205ENST00000556098 KCNQ2O43526 872 aa15.68■□□□□ 0.1
CHGA-205ENST00000556098 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
CHGA-205ENST00000556098 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
CHGA-205ENST00000556098 SIN3AQ96ST3 1273 aa15.66■□□□□ 0.1
CHGA-205ENST00000556098 COL5A2P05997 1499 aaPredicted RBP15.65■□□□□ 0.1
CHGA-205ENST00000556098 OVOS2A0A0G2JMS6 1433 aa15.65■□□□□ 0.1
CHGA-205ENST00000556098 OVOS2A0A0J9YW53 1432 aa15.65■□□□□ 0.1
CHGA-205ENST00000556098 OVOS2Q6IE36 1432 aa15.65■□□□□ 0.1
CHGA-205ENST00000556098 SRPK2P78362 688 aaKnown RBP15.64■□□□□ 0.09
CHGA-205ENST00000556098 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
CHGA-205ENST00000556098 NINLQ9Y2I6 1382 aa15.63■□□□□ 0.09
CHGA-205ENST00000556098 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
CHGA-205ENST00000556098 BCL11BQ9C0K0 894 aaPredicted RBP15.63■□□□□ 0.09
CHGA-205ENST00000556098 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
CHGA-205ENST00000556098 CRB1P82279 1406 aa15.62■□□□□ 0.09
CHGA-205ENST00000556098 ZBTB7AO95365 584 aa15.62■□□□□ 0.09
CHGA-205ENST00000556098 NLRP13Q86W25 1043 aa15.62■□□□□ 0.09
CHGA-205ENST00000556098 PIK3C2AO00443 1686 aa15.62■□□□□ 0.09
CHGA-205ENST00000556098 SOX12O15370 315 aa15.61■□□□□ 0.09
CHGA-205ENST00000556098 TOM1L2Q6ZVM7 507 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms