RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 UTRNP46939 3433 aa16.73■□□□□ 0.27
MTHFD1-211ENST00000555709 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
MTHFD1-211ENST00000555709 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
MTHFD1-211ENST00000555709 FMN2Q9NZ56 1722 aa16.72■□□□□ 0.27
MTHFD1-211ENST00000555709 VGFO15240 615 aaPredicted RBP16.71■□□□□ 0.27
MTHFD1-211ENST00000555709 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
MTHFD1-211ENST00000555709 KCNQ2O43526 872 aa16.7■□□□□ 0.26
MTHFD1-211ENST00000555709 TRIM37O94972 964 aa16.7■□□□□ 0.26
MTHFD1-211ENST00000555709 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
MTHFD1-211ENST00000555709 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
MTHFD1-211ENST00000555709 ADGRB1O14514 1584 aa16.69■□□□□ 0.26
MTHFD1-211ENST00000555709 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
MTHFD1-211ENST00000555709 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
MTHFD1-211ENST00000555709 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
MTHFD1-211ENST00000555709 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
MTHFD1-211ENST00000555709 TECPR2O15040 1411 aa16.68■□□□□ 0.26
MTHFD1-211ENST00000555709 APBA3O96018 575 aa16.67■□□□□ 0.26
MTHFD1-211ENST00000555709 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
MTHFD1-211ENST00000555709 CEP350Q5VT06 3117 aa16.67■□□□□ 0.26
MTHFD1-211ENST00000555709 FAM196AQ6ZSG2 479 aa16.66■□□□□ 0.26
MTHFD1-211ENST00000555709 COL14A1Q05707 1796 aaKnown RBP16.66■□□□□ 0.26
MTHFD1-211ENST00000555709 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
MTHFD1-211ENST00000555709 PLEKHH1Q9ULM0 1364 aa16.65■□□□□ 0.26
MTHFD1-211ENST00000555709 PSME1Q06323 249 aa16.65■□□□□ 0.26
MTHFD1-211ENST00000555709 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
MTHFD1-211ENST00000555709 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
MTHFD1-211ENST00000555709 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.26
MTHFD1-211ENST00000555709 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.25
MTHFD1-211ENST00000555709 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
MTHFD1-211ENST00000555709 PHF8Q9UPP1 1060 aa16.63■□□□□ 0.25
MTHFD1-211ENST00000555709 NBPF1Q3BBV0 1214 aa16.62■□□□□ 0.25
MTHFD1-211ENST00000555709 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
MTHFD1-211ENST00000555709 NRKQ7Z2Y5 1582 aa16.6■□□□□ 0.25
MTHFD1-211ENST00000555709 KNDC1Q76NI1 1749 aa16.6■□□□□ 0.25
MTHFD1-211ENST00000555709 CHD4Q14839 1912 aa16.6■□□□□ 0.25
MTHFD1-211ENST00000555709 ABCC11Q96J66 1382 aa16.6■□□□□ 0.25
MTHFD1-211ENST00000555709 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
MTHFD1-211ENST00000555709 STK26Q9P289 416 aa16.59■□□□□ 0.25
MTHFD1-211ENST00000555709 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
MTHFD1-211ENST00000555709 ARHGEF28Q8N1W1 1705 aaKnown RBP16.59■□□□□ 0.25
MTHFD1-211ENST00000555709 TRPM3Q9HCF6 1732 aaPredicted RBP16.58■□□□□ 0.24
MTHFD1-211ENST00000555709 USP47Q96K76 1375 aa16.57■□□□□ 0.24
MTHFD1-211ENST00000555709 CARD11Q9BXL7 1154 aa16.57■□□□□ 0.24
MTHFD1-211ENST00000555709 MYOM1P52179 1685 aa16.56■□□□□ 0.24
MTHFD1-211ENST00000555709 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
MTHFD1-211ENST00000555709 YTHDC2Q9H6S0 1430 aaKnown RBP16.56■□□□□ 0.24
MTHFD1-211ENST00000555709 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
MTHFD1-211ENST00000555709 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
MTHFD1-211ENST00000555709 PTGER2P43116 358 aa16.54■□□□□ 0.24
MTHFD1-211ENST00000555709 TMEM132EQ6IEE7 984 aa16.54■□□□□ 0.24
MTHFD1-211ENST00000555709 PDGFDQ9GZP0 370 aaPredicted RBP16.53■□□□□ 0.24
MTHFD1-211ENST00000555709 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
MTHFD1-211ENST00000555709 EIF3AQ14152 1382 aaKnown RBP16.51■□□□□ 0.23
MTHFD1-211ENST00000555709 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
MTHFD1-211ENST00000555709 EIF4G2P78344 907 aaKnown RBP eCLIP16.51■□□□□ 0.23
MTHFD1-211ENST00000555709 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
MTHFD1-211ENST00000555709 HSPA5P11021 654 aaKnown RBP16.5■□□□□ 0.23
MTHFD1-211ENST00000555709 PMFBP1Q8TBY8 1022 aa16.5■□□□□ 0.23
MTHFD1-211ENST00000555709 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
MTHFD1-211ENST00000555709 RGPD3A6NKT7 1758 aaPredicted RBP16.5■□□□□ 0.23
MTHFD1-211ENST00000555709 RGPD4Q7Z3J3 1758 aa16.5■□□□□ 0.23
MTHFD1-211ENST00000555709 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
MTHFD1-211ENST00000555709 BARGINQ6ZT62 677 aa16.49■□□□□ 0.23
MTHFD1-211ENST00000555709 PRDM11Q9NQV5 511 aa16.49■□□□□ 0.23
MTHFD1-211ENST00000555709 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
MTHFD1-211ENST00000555709 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
MTHFD1-211ENST00000555709 FHDC1Q9C0D6 1143 aaPredicted RBP16.48■□□□□ 0.23
MTHFD1-211ENST00000555709 SBNO2Q9Y2G9 1366 aa16.47■□□□□ 0.23
MTHFD1-211ENST00000555709 ANKARQ7Z5J8 1434 aa16.46■□□□□ 0.23
MTHFD1-211ENST00000555709 TRAK1Q9UPV9 953 aa16.46■□□□□ 0.23
MTHFD1-211ENST00000555709 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
MTHFD1-211ENST00000555709 ST20-MTHFSA0A0A6YYL1 179 aa16.45■□□□□ 0.22
MTHFD1-211ENST00000555709 PLSCR1O15162 318 aa16.45■□□□□ 0.22
MTHFD1-211ENST00000555709 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
MTHFD1-211ENST00000555709 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
MTHFD1-211ENST00000555709 TESK2Q96S53 571 aa16.44■□□□□ 0.22
MTHFD1-211ENST00000555709 SGIP1Q9BQI5 828 aa16.44■□□□□ 0.22
MTHFD1-211ENST00000555709 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
MTHFD1-211ENST00000555709 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
MTHFD1-211ENST00000555709 PEAK1Q9H792 1746 aa16.44■□□□□ 0.22
MTHFD1-211ENST00000555709 CENPJQ9HC77 1338 aaPredicted RBP16.44■□□□□ 0.22
MTHFD1-211ENST00000555709 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
MTHFD1-211ENST00000555709 SSH2Q76I76 1423 aa16.43■□□□□ 0.22
MTHFD1-211ENST00000555709 PROM2Q8N271 834 aa16.42■□□□□ 0.22
MTHFD1-211ENST00000555709 TULP4Q9NRJ4 1543 aa16.41■□□□□ 0.22
MTHFD1-211ENST00000555709 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
MTHFD1-211ENST00000555709 PRAM1Q96QH2 718 aa16.41■□□□□ 0.22
MTHFD1-211ENST00000555709 PARP4Q9UKK3 1724 aaKnown RBP16.41■□□□□ 0.22
MTHFD1-211ENST00000555709 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
MTHFD1-211ENST00000555709 TCP11L2Q8N4U5 519 aa16.4■□□□□ 0.22
MTHFD1-211ENST00000555709 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
MTHFD1-211ENST00000555709 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
MTHFD1-211ENST00000555709 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
MTHFD1-211ENST00000555709 PRR36Q9H6K5 1346 aa16.39■□□□□ 0.21
MTHFD1-211ENST00000555709 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
MTHFD1-211ENST00000555709 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
MTHFD1-211ENST00000555709 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
MTHFD1-211ENST00000555709 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
MTHFD1-211ENST00000555709 SAFB2Q14151 953 aaKnown RBP eCLIP16.37■□□□□ 0.21
MTHFD1-211ENST00000555709 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms