RNA–Protein interactions for RNA: ENST00000555592.1

NPC2-206, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-206ENST00000555592 TULP4Q9NRJ4 1543 aa26.69■■□□□ 1.86
NPC2-206ENST00000555592 PRR36Q9H6K5 1346 aa26.68■■□□□ 1.86
NPC2-206ENST00000555592 EIF3AQ14152 1382 aaKnown RBP26.68■■□□□ 1.86
NPC2-206ENST00000555592 ITSN1Q15811 1721 aa26.65■■□□□ 1.86
NPC2-206ENST00000555592 THSD7AQ9UPZ6 1657 aa26.65■■□□□ 1.86
NPC2-206ENST00000555592 FAM182BQ5T319 152 aa26.64■■□□□ 1.86
NPC2-206ENST00000555592 TNS1Q9HBL0 1735 aaKnown RBP26.64■■□□□ 1.85
NPC2-206ENST00000555592 SPATA31A5Q5VU36 1347 aa26.63■■□□□ 1.85
NPC2-206ENST00000555592 SPATA31A7Q8IWB4 1347 aa26.63■■□□□ 1.85
NPC2-206ENST00000555592 WASLO00401 505 aaPredicted RBP26.62■■□□□ 1.85
NPC2-206ENST00000555592 PAK3O75914 559 aaPredicted RBP26.62■■□□□ 1.85
NPC2-206ENST00000555592 EN1Q05925 392 aaPredicted RBP26.62■■□□□ 1.85
NPC2-206ENST00000555592 NGDNQ8NEJ9 315 aaKnown RBP26.62■■□□□ 1.85
NPC2-206ENST00000555592 HRCP23327 699 aa26.61■■□□□ 1.85
NPC2-206ENST00000555592 KDM2AQ9Y2K7 1162 aa26.61■■□□□ 1.85
NPC2-206ENST00000555592 ARHGEF28Q8N1W1 1705 aaKnown RBP26.61■■□□□ 1.85
NPC2-206ENST00000555592 PRDM11Q9NQV5 511 aa26.6■■□□□ 1.85
NPC2-206ENST00000555592 RAB3GAP2Q9H2M9 1393 aa26.59■■□□□ 1.85
NPC2-206ENST00000555592 PHRF1Q9P1Y6 1649 aaKnown RBP26.59■■□□□ 1.85
NPC2-206ENST00000555592 DCAF11Q8TEB1 546 aa26.57■■□□□ 1.84
NPC2-206ENST00000555592 KIAA0232Q92628 1395 aa26.54■■□□□ 1.84
NPC2-206ENST00000555592 DISP2A7MBM2 1401 aa26.54■■□□□ 1.84
NPC2-206ENST00000555592 ATP7BP35670 1465 aa26.54■■□□□ 1.84
NPC2-206ENST00000555592 R3HDM1Q15032 1099 aaKnown RBP26.53■■□□□ 1.84
NPC2-206ENST00000555592 CHRNA2Q15822 529 aa26.52■■□□□ 1.84
NPC2-206ENST00000555592 SPATA31A1Q5TZJ5 1347 aa26.52■■□□□ 1.84
NPC2-206ENST00000555592 NUDT16Q96DE0 195 aaKnown RBP26.51■■□□□ 1.83
NPC2-206ENST00000555592 STRN4Q9NRL3 753 aa26.51■■□□□ 1.83
NPC2-206ENST00000555592 TOPAZ1Q8N9V7 1692 aa26.5■■□□□ 1.83
NPC2-206ENST00000555592 EZH2Q15910 746 aaKnown RBP26.49■■□□□ 1.83
NPC2-206ENST00000555592 ZC3H6P61129 1189 aaKnown RBP26.48■■□□□ 1.83
NPC2-206ENST00000555592 NUTM2GQ5VZR2 741 aa26.48■■□□□ 1.83
NPC2-206ENST00000555592 TRIM37O94972 964 aa26.47■■□□□ 1.83
NPC2-206ENST00000555592 STAC3Q96MF2 364 aa26.46■■□□□ 1.83
NPC2-206ENST00000555592 FAM196AQ6ZSG2 479 aa26.45■■□□□ 1.82
NPC2-206ENST00000555592 USP35Q9P2H5 1018 aa26.44■■□□□ 1.82
NPC2-206ENST00000555592 NRKQ7Z2Y5 1582 aa26.43■■□□□ 1.82
NPC2-206ENST00000555592 CAMKK2Q96RR4 588 aa26.43■■□□□ 1.82
NPC2-206ENST00000555592 CDK19Q9BWU1 502 aa26.43■■□□□ 1.82
NPC2-206ENST00000555592 RREB1Q92766 1687 aa26.43■■□□□ 1.82
NPC2-206ENST00000555592 SSH2Q76I76 1423 aa26.42■■□□□ 1.82
NPC2-206ENST00000555592 NUP188Q5SRE5 1749 aa26.41■■□□□ 1.82
NPC2-206ENST00000555592 POLR3AO14802 1390 aaPredicted RBP26.41■■□□□ 1.82
NPC2-206ENST00000555592 ACEP12821 1306 aa26.4■■□□□ 1.82
NPC2-206ENST00000555592 APBA3O96018 575 aa26.4■■□□□ 1.82
NPC2-206ENST00000555592 EVA1CP58658 441 aa26.4■■□□□ 1.82
NPC2-206ENST00000555592 LMO7Q8WWI1 1683 aa26.39■■□□□ 1.82
NPC2-206ENST00000555592 CAMTA1Q9Y6Y1 1673 aa26.39■■□□□ 1.82
NPC2-206ENST00000555592 KIAA1210Q9ULL0 1709 aa26.39■■□□□ 1.81
NPC2-206ENST00000555592 PARD3Q8TEW0 1356 aa26.38■■□□□ 1.81
NPC2-206ENST00000555592 NBPF8Q3BBV2 869 aa26.38■■□□□ 1.81
NPC2-206ENST00000555592 PDE3BQ13370 1112 aa26.37■■□□□ 1.81
NPC2-206ENST00000555592 BARGINQ6ZT62 677 aa26.37■■□□□ 1.81
NPC2-206ENST00000555592 CCDC61Q9Y6R9 512 aa26.37■■□□□ 1.81
NPC2-206ENST00000555592 LARP1Q6PKG0 1096 aaKnown RBP26.35■■□□□ 1.81
NPC2-206ENST00000555592 ABTB2Q8N961 1025 aa26.35■■□□□ 1.81
NPC2-206ENST00000555592 PARP4Q9UKK3 1724 aaKnown RBP26.34■■□□□ 1.81
NPC2-206ENST00000555592 PLEKHG3A1L390 1219 aa26.33■■□□□ 1.81
NPC2-206ENST00000555592 TCP11L2Q8N4U5 519 aa26.33■■□□□ 1.81
NPC2-206ENST00000555592 CPDO75976 1380 aa26.33■■□□□ 1.8
NPC2-206ENST00000555592 USP19O94966 1318 aa26.32■■□□□ 1.8
NPC2-206ENST00000555592 PPIP5K1Q6PFW1 1433 aa26.28■■□□□ 1.8
NPC2-206ENST00000555592 SBF2Q86WG5 1849 aa26.28■■□□□ 1.8
NPC2-206ENST00000555592 NBPF14Q5TI25 921 aa26.27■■□□□ 1.8
NPC2-206ENST00000555592 NLRP13Q86W25 1043 aa26.27■■□□□ 1.8
NPC2-206ENST00000555592 COL5A2P05997 1499 aaPredicted RBP26.27■■□□□ 1.8
NPC2-206ENST00000555592 SRPK2P78362 688 aaKnown RBP26.26■■□□□ 1.79
NPC2-206ENST00000555592 THRAP3Q9Y2W1 955 aaKnown RBP26.26■■□□□ 1.79
NPC2-206ENST00000555592 QRICH2Q9H0J4 1663 aa26.25■■□□□ 1.79
NPC2-206ENST00000555592 GCP02774 474 aa26.25■■□□□ 1.79
NPC2-206ENST00000555592 NBPF1Q3BBV0 1214 aa26.25■■□□□ 1.79
NPC2-206ENST00000555592 PEAK1Q9H792 1746 aa26.24■■□□□ 1.79
NPC2-206ENST00000555592 ZBTB7CA1YPR0 619 aa26.23■■□□□ 1.79
NPC2-206ENST00000555592 LRRC37A3O60309 1634 aa26.22■■□□□ 1.79
NPC2-206ENST00000555592 CABP2Q9NPB3 220 aa26.22■■□□□ 1.79
NPC2-206ENST00000555592 CRB1P82279 1406 aa26.22■■□□□ 1.79
NPC2-206ENST00000555592 RGPD3A6NKT7 1758 aaPredicted RBP26.21■■□□□ 1.79
NPC2-206ENST00000555592 RGPD4Q7Z3J3 1758 aa26.21■■□□□ 1.79
NPC2-206ENST00000555592 WNK3Q9BYP7 1800 aa26.21■■□□□ 1.79
NPC2-206ENST00000555592 CENPJQ9HC77 1338 aaPredicted RBP26.2■■□□□ 1.79
NPC2-206ENST00000555592 OVOS2A0A0G2JMS6 1433 aa26.19■■□□□ 1.78
NPC2-206ENST00000555592 OVOS2A0A0J9YW53 1432 aa26.19■■□□□ 1.78
NPC2-206ENST00000555592 OVOS2Q6IE36 1432 aa26.19■■□□□ 1.78
NPC2-206ENST00000555592 PPP1R1BQ9UD71 204 aaPredicted RBP26.18■■□□□ 1.78
NPC2-206ENST00000555592 BRD4O60885 1362 aaPredicted RBP26.18■■□□□ 1.78
NPC2-206ENST00000555592 COL18A1P39060 1754 aa26.18■■□□□ 1.78
NPC2-206ENST00000555592 SPON1Q9HCB6 807 aa26.17■■□□□ 1.78
NPC2-206ENST00000555592 SLIT3O75094 1523 aa26.17■■□□□ 1.78
NPC2-206ENST00000555592 AKAP12Q02952 1782 aa26.17■■□□□ 1.78
NPC2-206ENST00000555592 RGPD5Q99666 1765 aa26.17■■□□□ 1.78
NPC2-206ENST00000555592 PIK3C2AO00443 1686 aa26.16■■□□□ 1.78
NPC2-206ENST00000555592 USP6P35125 1406 aa26.16■■□□□ 1.78
NPC2-206ENST00000555592 C11orf95C9JLR9 678 aaPredicted RBP26.16■■□□□ 1.78
NPC2-206ENST00000555592 NLRP6P59044 892 aa26.16■■□□□ 1.78
NPC2-206ENST00000555592 AATKQ6ZMQ8 1374 aa26.15■■□□□ 1.78
NPC2-206ENST00000555592 KCNQ2O43526 872 aa26.14■■□□□ 1.78
NPC2-206ENST00000555592 YY1P25490 414 aa26.14■■□□□ 1.78
NPC2-206ENST00000555592 CABP1Q9NZU7 370 aa26.14■■□□□ 1.78
NPC2-206ENST00000555592 DDB1Q16531 1140 aa26.12■■□□□ 1.77
NPC2-206ENST00000555592 TOM1L2Q6ZVM7 507 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms