RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 USP17L13C9JLJ4 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L12C9JPN9 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L11C9JVI0 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L21D6R901 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L18D6R9N7 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L22D6RA61 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L17D6RBQ6 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L19D6RCP7 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L20D6RJB6 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 USP17L24Q0WX57 530 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 FAM174AQ8TBP5 190 aa10.86□□□□□ -0.67
PAX3-210ENST00000555548 SNPHO15079 494 aa10.85□□□□□ -0.67
PAX3-210ENST00000555548 CRTC2Q53ET0 693 aaPredicted RBP10.85□□□□□ -0.67
PAX3-210ENST00000555548 DNAJC14Q6Y2X3 702 aaPredicted RBP10.85□□□□□ -0.67
PAX3-210ENST00000555548 LAPTM4BQ86VI4 370 aa10.85□□□□□ -0.67
PAX3-210ENST00000555548 SLAIN2Q9P270 581 aa10.85□□□□□ -0.67
PAX3-210ENST00000555548 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
PAX3-210ENST00000555548 F12P00748 615 aaPredicted RBP10.84□□□□□ -0.67
PAX3-210ENST00000555548 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
PAX3-210ENST00000555548 CLP1Q92989 425 aaKnown RBP10.84□□□□□ -0.67
PAX3-210ENST00000555548 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
PAX3-210ENST00000555548 IGSF5Q9NSI5 407 aa10.84□□□□□ -0.67
PAX3-210ENST00000555548 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
PAX3-210ENST00000555548 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
PAX3-210ENST00000555548 PTK7Q13308 1070 aa10.83□□□□□ -0.68
PAX3-210ENST00000555548 PUS10Q3MIT2 529 aaKnown RBP10.83□□□□□ -0.68
PAX3-210ENST00000555548 LARP1Q6PKG0 1096 aaKnown RBP10.83□□□□□ -0.68
PAX3-210ENST00000555548 MAMSTRQ6ZN01 415 aa10.83□□□□□ -0.68
PAX3-210ENST00000555548 DEPDC4Q8N2C3 294 aa10.83□□□□□ -0.68
PAX3-210ENST00000555548 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
PAX3-210ENST00000555548 RNF40O75150 1001 aa10.82□□□□□ -0.68
PAX3-210ENST00000555548 FAM200AQ8TCP9 573 aa10.82□□□□□ -0.68
PAX3-210ENST00000555548 ZNF592Q92610 1267 aa10.82□□□□□ -0.68
PAX3-210ENST00000555548 USB1Q9BQ65 265 aaKnown RBP10.82□□□□□ -0.68
PAX3-210ENST00000555548 SOWAHDA6NJG2 315 aa10.81□□□□□ -0.68
PAX3-210ENST00000555548 ATP5J2-PTCD1G3V325 749 aa10.81□□□□□ -0.68
PAX3-210ENST00000555548 POTEB2H3BUK9 544 aa10.81□□□□□ -0.68
PAX3-210ENST00000555548 LZTS3O60299 673 aaPredicted RBP10.81□□□□□ -0.68
PAX3-210ENST00000555548 RASA1P20936 1047 aa10.81□□□□□ -0.68
PAX3-210ENST00000555548 CEP126Q9P2H0 1117 aa10.81□□□□□ -0.68
PAX3-210ENST00000555548 SALL2Q9Y467 1007 aaPredicted RBP10.81□□□□□ -0.68
PAX3-210ENST00000555548 DMRTA1Q5VZB9 504 aa10.8□□□□□ -0.68
PAX3-210ENST00000555548 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
PAX3-210ENST00000555548 GPSM3Q9Y4H4 160 aa10.8□□□□□ -0.68
PAX3-210ENST00000555548 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
PAX3-210ENST00000555548 NCOA4Q13772 614 aa10.79□□□□□ -0.68
PAX3-210ENST00000555548 SLFNL1Q499Z3 407 aa10.79□□□□□ -0.68
PAX3-210ENST00000555548 BRICD5Q6PL45 260 aa10.79□□□□□ -0.68
PAX3-210ENST00000555548 BLOC1S3Q6QNY0 202 aa10.79□□□□□ -0.68
PAX3-210ENST00000555548 PHTF2Q8N3S3 785 aa10.79□□□□□ -0.68
PAX3-210ENST00000555548 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
PAX3-210ENST00000555548 ATP2B4P23634 1241 aa10.78□□□□□ -0.68
PAX3-210ENST00000555548 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
PAX3-210ENST00000555548 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
PAX3-210ENST00000555548 SIRT1Q96EB6 747 aa10.78□□□□□ -0.68
PAX3-210ENST00000555548 MAP10Q9P2G4 905 aa10.78□□□□□ -0.68
PAX3-210ENST00000555548 PTPRNQ16849 979 aa10.77□□□□□ -0.69
PAX3-210ENST00000555548 NOM1Q5C9Z4 860 aaKnown RBP10.77□□□□□ -0.69
PAX3-210ENST00000555548 RNF135Q8IUD6 432 aa10.77□□□□□ -0.69
PAX3-210ENST00000555548 PRR14Q9BWN1 585 aa10.77□□□□□ -0.69
PAX3-210ENST00000555548 NBPF3Q9H094 633 aa10.77□□□□□ -0.69
PAX3-210ENST00000555548 KIAA1522Q9P206 1035 aaPredicted RBP10.77□□□□□ -0.69
PAX3-210ENST00000555548 SWI5Q1ZZU3 235 aa10.76□□□□□ -0.69
PAX3-210ENST00000555548 PLPP7Q8NBV4 271 aa10.76□□□□□ -0.69
PAX3-210ENST00000555548 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
PAX3-210ENST00000555548 CHIC2Q9UKJ5 165 aa10.76□□□□□ -0.69
PAX3-210ENST00000555548 JUNDP17535 347 aa10.75□□□□□ -0.69
PAX3-210ENST00000555548 SERPINB4P48594 390 aa10.75□□□□□ -0.69
PAX3-210ENST00000555548 PTK2Q05397 1052 aa10.75□□□□□ -0.69
PAX3-210ENST00000555548 GPKOWQ92917 476 aaPredicted RBP eCLIP10.75□□□□□ -0.69
PAX3-210ENST00000555548 ZNF16P17020 682 aaPredicted RBP10.74□□□□□ -0.69
PAX3-210ENST00000555548 MARSP56192 900 aaKnown RBP10.74□□□□□ -0.69
PAX3-210ENST00000555548 MAP7D1Q3KQU3 841 aa10.74□□□□□ -0.69
PAX3-210ENST00000555548 PDXDC2PQ6P474 469 aa10.74□□□□□ -0.69
PAX3-210ENST00000555548 C1orf216Q8TAB5 229 aa10.74□□□□□ -0.69
PAX3-210ENST00000555548 MRRFQ96E11 262 aaKnown RBP10.74□□□□□ -0.69
PAX3-210ENST00000555548 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
PAX3-210ENST00000555548 PBX2P40425 430 aa10.73□□□□□ -0.69
PAX3-210ENST00000555548 DPYDQ12882 1025 aa10.73□□□□□ -0.69
PAX3-210ENST00000555548 ARMC2Q8NEN0 867 aa10.73□□□□□ -0.69
PAX3-210ENST00000555548 THAP11Q96EK4 314 aa10.73□□□□□ -0.69
PAX3-210ENST00000555548 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
PAX3-210ENST00000555548 CTHP32929 405 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 EML3Q32P44 896 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 TRIM50Q86XT4 487 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 OGFOD1Q8N543 542 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 OCSTAMPQ9BR26 566 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 USP35Q9P2H5 1018 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 AXIN2Q9Y2T1 843 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
PAX3-210ENST00000555548 SP7Q8TDD2 431 aaPredicted RBP10.71□□□□□ -0.69
PAX3-210ENST00000555548 LRCH3Q96II8 777 aa10.71□□□□□ -0.69
PAX3-210ENST00000555548 BCL2L13Q9BXK5 485 aa10.71□□□□□ -0.69
PAX3-210ENST00000555548 KCNH2Q12809 1159 aa10.7□□□□□ -0.7
PAX3-210ENST00000555548 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
PAX3-210ENST00000555548 DNAAF2Q9NVR5 837 aaKnown RBP10.7□□□□□ -0.7
PAX3-210ENST00000555548 ATP1A2P50993 1020 aa10.69□□□□□ -0.7
PAX3-210ENST00000555548 CLDN10P78369 228 aa10.69□□□□□ -0.7
PAX3-210ENST00000555548 SCUBE3Q8IX30 993 aa10.69□□□□□ -0.7
PAX3-210ENST00000555548 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms