RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ACEP12821 1306 aa34.97■■■■□ 3.19
PRKCH-216ENST00000555542 NWD2Q9ULI1 1742 aa34.97■■■■□ 3.19
PRKCH-216ENST00000555542 CABP2Q9NPB3 220 aa34.96■■■■□ 3.19
PRKCH-216ENST00000555542 CCDC9Q9Y3X0 531 aaKnown RBP34.95■■■■□ 3.19
PRKCH-216ENST00000555542 TONSLQ96HA7 1378 aa34.95■■■■□ 3.19
PRKCH-216ENST00000555542 POLR3AO14802 1390 aaPredicted RBP34.94■■■■□ 3.18
PRKCH-216ENST00000555542 ATAD2Q6PL18 1390 aa34.94■■■■□ 3.18
PRKCH-216ENST00000555542 RALGAPBQ86X10 1494 aa34.93■■■■□ 3.18
PRKCH-216ENST00000555542 PPIP5K1Q6PFW1 1433 aa34.93■■■■□ 3.18
PRKCH-216ENST00000555542 NBPF8Q3BBV2 869 aa34.93■■■■□ 3.18
PRKCH-216ENST00000555542 PLEKHG3A1L390 1219 aa34.92■■■■□ 3.18
PRKCH-216ENST00000555542 FAM83GA6ND36 823 aa34.92■■■■□ 3.18
PRKCH-216ENST00000555542 GLI3P10071 1580 aa34.9■■■■□ 3.18
PRKCH-216ENST00000555542 CRYBG1Q9Y4K1 1723 aa34.89■■■■□ 3.18
PRKCH-216ENST00000555542 COL14A1Q05707 1796 aaKnown RBP34.89■■■■□ 3.18
PRKCH-216ENST00000555542 EVC2Q86UK5 1308 aa34.88■■■■□ 3.17
PRKCH-216ENST00000555542 VPS72Q15906 364 aa34.88■■■■□ 3.17
PRKCH-216ENST00000555542 NUTM2GQ5VZR2 741 aa34.88■■■■□ 3.17
PRKCH-216ENST00000555542 BTG4Q9NY30 223 aa34.86■■■■□ 3.17
PRKCH-216ENST00000555542 PRDM11Q9NQV5 511 aa34.84■■■■□ 3.17
PRKCH-216ENST00000555542 PHRF1Q9P1Y6 1649 aaKnown RBP34.84■■■■□ 3.17
PRKCH-216ENST00000555542 ABTB2Q8N961 1025 aa34.83■■■■□ 3.17
PRKCH-216ENST00000555542 NRAPQ86VF7 1730 aa34.82■■■■□ 3.16
PRKCH-216ENST00000555542 CARD11Q9BXL7 1154 aa34.81■■■■□ 3.16
PRKCH-216ENST00000555542 CABP1Q9NZU7 370 aa34.81■■■■□ 3.16
PRKCH-216ENST00000555542 A0A0G2JS52 829 aa34.78■■■■□ 3.16
PRKCH-216ENST00000555542 MYT1Q01538 1121 aa34.78■■■■□ 3.16
PRKCH-216ENST00000555542 KIAA0232Q92628 1395 aa34.77■■■■□ 3.16
PRKCH-216ENST00000555542 ZC3H6P61129 1189 aaKnown RBP34.76■■■■□ 3.16
PRKCH-216ENST00000555542 SEPT12Q8IYM1 358 aa34.76■■■■□ 3.16
PRKCH-216ENST00000555542 BRWD3Q6RI45 1802 aa34.74■■■■□ 3.15
PRKCH-216ENST00000555542 CHRNA2Q15822 529 aa34.73■■■■□ 3.15
PRKCH-216ENST00000555542 NLRP13Q86W25 1043 aa34.73■■■■□ 3.15
PRKCH-216ENST00000555542 BRD4O60885 1362 aaPredicted RBP34.73■■■■□ 3.15
PRKCH-216ENST00000555542 USP6P35125 1406 aa34.72■■■■□ 3.15
PRKCH-216ENST00000555542 NRKQ7Z2Y5 1582 aa34.7■■■■□ 3.15
PRKCH-216ENST00000555542 FAM98CQ17RN3 349 aaKnown RBP34.69■■■■□ 3.14
PRKCH-216ENST00000555542 STRN4Q9NRL3 753 aa34.68■■■■□ 3.14
PRKCH-216ENST00000555542 USP19O94966 1318 aa34.67■■■■□ 3.14
PRKCH-216ENST00000555542 ONECUT3O60422 494 aaPredicted RBP34.66■■■■□ 3.14
PRKCH-216ENST00000555542 SBNO2Q9Y2G9 1366 aa34.64■■■■□ 3.14
PRKCH-216ENST00000555542 SPATA31A5Q5VU36 1347 aa34.64■■■■□ 3.14
PRKCH-216ENST00000555542 SPATA31A7Q8IWB4 1347 aa34.64■■■■□ 3.14
PRKCH-216ENST00000555542 NLRP6P59044 892 aa34.64■■■■□ 3.14
PRKCH-216ENST00000555542 KRT27Q7Z3Y8 459 aa34.64■■■■□ 3.14
PRKCH-216ENST00000555542 CCDC125Q86Z20 511 aa34.64■■■■□ 3.14
PRKCH-216ENST00000555542 EVA1CP58658 441 aa34.63■■■■□ 3.13
PRKCH-216ENST00000555542 GCP02774 474 aa34.62■■■■□ 3.13
PRKCH-216ENST00000555542 ZNF692Q9BU19 519 aaPredicted RBP34.62■■■■□ 3.13
PRKCH-216ENST00000555542 AKAP12Q02952 1782 aa34.62■■■■□ 3.13
PRKCH-216ENST00000555542 ZBTB7CA1YPR0 619 aa34.6■■■■□ 3.13
PRKCH-216ENST00000555542 CPDO75976 1380 aa34.6■■■■□ 3.13
PRKCH-216ENST00000555542 PIK3C2AO00443 1686 aa34.58■■■■□ 3.13
PRKCH-216ENST00000555542 EP400Q96L91 3159 aa34.57■■■■□ 3.12
PRKCH-216ENST00000555542 BLMP54132 1417 aaPredicted RBP34.56■■■■□ 3.12
PRKCH-216ENST00000555542 SSH2Q76I76 1423 aa34.56■■■■□ 3.12
PRKCH-216ENST00000555542 SF3B2Q13435 895 aaKnown RBP34.56■■■■□ 3.12
PRKCH-216ENST00000555542 KTN1Q86UP2 1357 aaKnown RBP34.56■■■■□ 3.12
PRKCH-216ENST00000555542 SPATA31A1Q5TZJ5 1347 aa34.55■■■■□ 3.12
PRKCH-216ENST00000555542 USP35Q9P2H5 1018 aa34.55■■■■□ 3.12
PRKCH-216ENST00000555542 TTC21BQ7Z4L5 1316 aa34.55■■■■□ 3.12
PRKCH-216ENST00000555542 TMC1Q8TDI8 760 aa34.54■■■■□ 3.12
PRKCH-216ENST00000555542 CAMTA1Q9Y6Y1 1673 aa34.54■■■■□ 3.12
PRKCH-216ENST00000555542 PCGF6Q9BYE7 350 aa34.53■■■■□ 3.12
PRKCH-216ENST00000555542 SLIT3O75094 1523 aa34.53■■■■□ 3.12
PRKCH-216ENST00000555542 LMO7Q8WWI1 1683 aa34.53■■■■□ 3.12
PRKCH-216ENST00000555542 CPSF1Q10570 1443 aaKnown RBP34.52■■■■□ 3.12
PRKCH-216ENST00000555542 TTC21AQ8NDW8 1320 aa34.52■■■■□ 3.12
PRKCH-216ENST00000555542 THSD7AQ9UPZ6 1657 aa34.5■■■■□ 3.11
PRKCH-216ENST00000555542 MON2Q7Z3U7 1717 aa34.5■■■■□ 3.11
PRKCH-216ENST00000555542 LARP1Q6PKG0 1096 aaKnown RBP34.48■■■■□ 3.11
PRKCH-216ENST00000555542 SOX12O15370 315 aa34.47■■■■□ 3.11
PRKCH-216ENST00000555542 ST20-MTHFSA0A0A6YYL1 179 aa34.46■■■■□ 3.11
PRKCH-216ENST00000555542 HDGFL2Q7Z4V5 671 aaPredicted RBP34.46■■■■□ 3.11
PRKCH-216ENST00000555542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.45■■■■□ 3.11
PRKCH-216ENST00000555542 KCNH5Q8NCM2 988 aa34.45■■■■□ 3.11
PRKCH-216ENST00000555542 COL5A2P05997 1499 aaPredicted RBP34.45■■■■□ 3.1
PRKCH-216ENST00000555542 FAM182BQ5T319 152 aa34.43■■■■□ 3.1
PRKCH-216ENST00000555542 AATKQ6ZMQ8 1374 aa34.42■■■■□ 3.1
PRKCH-216ENST00000555542 TCP11L2Q8N4U5 519 aa34.42■■■■□ 3.1
PRKCH-216ENST00000555542 SLC12A5Q9H2X9 1139 aa34.42■■■■□ 3.1
PRKCH-216ENST00000555542 SLC24A1O60721 1099 aa34.41■■■■□ 3.1
PRKCH-216ENST00000555542 DEFB132Q7Z7B7 95 aa34.41■■■■□ 3.1
PRKCH-216ENST00000555542 TERF2IPQ9NYB0 399 aa34.41■■■■□ 3.1
PRKCH-216ENST00000555542 ZRANB1Q9UGI0 708 aa34.41■■■■□ 3.1
PRKCH-216ENST00000555542 BARGINQ6ZT62 677 aa34.4■■■■□ 3.1
PRKCH-216ENST00000555542 CD163L1Q9NR16 1453 aa34.39■■■■□ 3.1
PRKCH-216ENST00000555542 PUS7Q96PZ0 661 aaKnown RBP34.39■■■■□ 3.1
PRKCH-216ENST00000555542 TESK2Q96S53 571 aa34.39■■■■□ 3.1
PRKCH-216ENST00000555542 THRAP3Q9Y2W1 955 aaKnown RBP34.37■■■■□ 3.09
PRKCH-216ENST00000555542 CRB1P82279 1406 aa34.37■■■■□ 3.09
PRKCH-216ENST00000555542 USP47Q96K76 1375 aa34.36■■■■□ 3.09
PRKCH-216ENST00000555542 CLSPNQ9HAW4 1339 aa34.36■■■■□ 3.09
PRKCH-216ENST00000555542 PDE3BQ13370 1112 aa34.36■■■■□ 3.09
PRKCH-216ENST00000555542 RGPD1P0DJD0 1748 aa34.35■■■■□ 3.09
PRKCH-216ENST00000555542 COL18A1P39060 1754 aa34.34■■■■□ 3.09
PRKCH-216ENST00000555542 BAG6P46379 1132 aa34.34■■■■□ 3.09
PRKCH-216ENST00000555542 TOM1L2Q6ZVM7 507 aa34.34■■■■□ 3.09
PRKCH-216ENST00000555542 ARHGEF25Q86VW2 580 aa34.34■■■■□ 3.09
PRKCH-216ENST00000555542 NME9Q86XW9 330 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms