RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 CLTCL1P53675 1640 aa10.66□□□□□ -0.7
GPHN-208ENST00000555503 FXR2P51116 673 aaKnown RBP eCLIP10.65□□□□□ -0.7
GPHN-208ENST00000555503 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
GPHN-208ENST00000555503 POTEAQ6S8J7 498 aa10.65□□□□□ -0.7
GPHN-208ENST00000555503 PPARGC1BQ86YN6 1023 aaKnown RBP10.65□□□□□ -0.7
GPHN-208ENST00000555503 ADAMTS13Q76LX8 1427 aa10.65□□□□□ -0.7
GPHN-208ENST00000555503 NHSL1Q5SYE7 1610 aa10.65□□□□□ -0.7
GPHN-208ENST00000555503 SLAIN2Q9P270 581 aa10.64□□□□□ -0.71
GPHN-208ENST00000555503 LRP6O75581 1613 aa10.64□□□□□ -0.71
GPHN-208ENST00000555503 AHDC1Q5TGY3 1603 aaPredicted RBP10.64□□□□□ -0.71
GPHN-208ENST00000555503 PODXL2Q9NZ53 605 aa10.63□□□□□ -0.71
GPHN-208ENST00000555503 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
GPHN-208ENST00000555503 GPR37O15354 613 aa10.62□□□□□ -0.71
GPHN-208ENST00000555503 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
GPHN-208ENST00000555503 PDIA6Q15084 440 aa10.62□□□□□ -0.71
GPHN-208ENST00000555503 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
GPHN-208ENST00000555503 NUP155O75694 1391 aa10.62□□□□□ -0.71
GPHN-208ENST00000555503 PPLO60437 1756 aa10.62□□□□□ -0.71
GPHN-208ENST00000555503 SETBP1Q9Y6X0 1596 aa10.61□□□□□ -0.71
GPHN-208ENST00000555503 PTPRUQ92729 1446 aa10.61□□□□□ -0.71
GPHN-208ENST00000555503 ROCK1Q13464 1354 aa10.61□□□□□ -0.71
GPHN-208ENST00000555503 JCADQ9P266 1359 aa10.61□□□□□ -0.71
GPHN-208ENST00000555503 NEXMIFQ5QGS0 1516 aa10.6□□□□□ -0.71
GPHN-208ENST00000555503 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.6□□□□□ -0.71
GPHN-208ENST00000555503 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
GPHN-208ENST00000555503 DPYSL4O14531 572 aa10.59□□□□□ -0.71
GPHN-208ENST00000555503 HDGFP51858 240 aaKnown RBP10.59□□□□□ -0.71
GPHN-208ENST00000555503 EMILIN3Q9NT22 766 aa10.59□□□□□ -0.71
GPHN-208ENST00000555503 TBX22Q9Y458 520 aa10.59□□□□□ -0.71
GPHN-208ENST00000555503 MEX3CQ5U5Q3 659 aaKnown RBP10.58□□□□□ -0.72
GPHN-208ENST00000555503 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
GPHN-208ENST00000555503 MARF1Q9Y4F3 1742 aaKnown RBP10.58□□□□□ -0.72
GPHN-208ENST00000555503 ATF3P18847 181 aa10.57□□□□□ -0.72
GPHN-208ENST00000555503 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
GPHN-208ENST00000555503 AMOTL2Q9Y2J4 779 aa10.57□□□□□ -0.72
GPHN-208ENST00000555503 PIK3R4Q99570 1358 aa10.56□□□□□ -0.72
GPHN-208ENST00000555503 ZNF326Q5BKZ1 582 aaKnown RBP10.56□□□□□ -0.72
GPHN-208ENST00000555503 FAM117AQ9C073 453 aa10.56□□□□□ -0.72
GPHN-208ENST00000555503 NCOA3Q9Y6Q9 1424 aa10.56□□□□□ -0.72
GPHN-208ENST00000555503 IFT172Q9UG01 1749 aa10.55□□□□□ -0.72
GPHN-208ENST00000555503 RGPD8O14715 1765 aaPredicted RBP10.55□□□□□ -0.72
GPHN-208ENST00000555503 NUTM2BA6NNL0 878 aaPredicted RBP10.55□□□□□ -0.72
GPHN-208ENST00000555503 NUTM2EB1AL46 878 aaPredicted RBP10.55□□□□□ -0.72
GPHN-208ENST00000555503 NUTM2AQ8IVF1 878 aaPredicted RBP10.55□□□□□ -0.72
GPHN-208ENST00000555503 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
GPHN-208ENST00000555503 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
GPHN-208ENST00000555503 C19orf44Q9H6X5 657 aa10.55□□□□□ -0.72
GPHN-208ENST00000555503 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
GPHN-208ENST00000555503 MST1RQ04912 1400 aa10.54□□□□□ -0.72
GPHN-208ENST00000555503 BRINP3Q76B58 766 aa10.54□□□□□ -0.72
GPHN-208ENST00000555503 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
GPHN-208ENST00000555503 METP08581 1390 aa10.53□□□□□ -0.72
GPHN-208ENST00000555503 DCCP43146 1447 aa10.53□□□□□ -0.72
GPHN-208ENST00000555503 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
GPHN-208ENST00000555503 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
GPHN-208ENST00000555503 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
GPHN-208ENST00000555503 SPATA31A6Q5VVP1 1343 aa10.53□□□□□ -0.72
GPHN-208ENST00000555503 LAMC1P11047 1609 aa10.52□□□□□ -0.73
GPHN-208ENST00000555503 DSG2Q14126 1118 aa10.52□□□□□ -0.73
GPHN-208ENST00000555503 DDX17Q92841 729 aaKnown RBP10.52□□□□□ -0.73
GPHN-208ENST00000555503 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
GPHN-208ENST00000555503 ADGRL3Q9HAR2 1447 aa10.51□□□□□ -0.73
GPHN-208ENST00000555503 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
GPHN-208ENST00000555503 AMHR2Q16671 573 aa10.51□□□□□ -0.73
GPHN-208ENST00000555503 EP400Q96L91 3159 aa10.51□□□□□ -0.73
GPHN-208ENST00000555503 CCDC102AQ96A19 550 aa10.5□□□□□ -0.73
GPHN-208ENST00000555503 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
GPHN-208ENST00000555503 NAIPQ13075 1403 aa10.5□□□□□ -0.73
GPHN-208ENST00000555503 ZNF772Q68DY9 489 aaPredicted RBP10.49□□□□□ -0.73
GPHN-208ENST00000555503 AFF2P51816 1311 aa10.49□□□□□ -0.73
GPHN-208ENST00000555503 SETD5Q9C0A6 1442 aa10.49□□□□□ -0.73
GPHN-208ENST00000555503 COL22A1Q8NFW1 1626 aaPredicted RBP10.48□□□□□ -0.73
GPHN-208ENST00000555503 KNDC1Q76NI1 1749 aa10.48□□□□□ -0.73
GPHN-208ENST00000555503 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
GPHN-208ENST00000555503 FOXK1P85037 733 aa10.48□□□□□ -0.73
GPHN-208ENST00000555503 TRIM26Q12899 539 aaPredicted RBP10.48□□□□□ -0.73
GPHN-208ENST00000555503 FLIIQ13045 1269 aa10.48□□□□□ -0.73
GPHN-208ENST00000555503 BRWD3Q6RI45 1802 aa10.48□□□□□ -0.73
GPHN-208ENST00000555503 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
GPHN-208ENST00000555503 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
GPHN-208ENST00000555503 C8orf37Q96NL8 207 aa10.47□□□□□ -0.73
GPHN-208ENST00000555503 PNPLA6Q8IY17 1366 aa10.47□□□□□ -0.73
GPHN-208ENST00000555503 RRBP1Q9P2E9 1410 aaKnown RBP10.47□□□□□ -0.73
GPHN-208ENST00000555503 FMN2Q9NZ56 1722 aa10.47□□□□□ -0.73
GPHN-208ENST00000555503 IRF6O14896 467 aa10.46□□□□□ -0.73
GPHN-208ENST00000555503 RXRBP28702 533 aa10.46□□□□□ -0.73
GPHN-208ENST00000555503 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
GPHN-208ENST00000555503 MS4A3Q96HJ5 214 aa10.46□□□□□ -0.73
GPHN-208ENST00000555503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.73
GPHN-208ENST00000555503 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.74
GPHN-208ENST00000555503 CDC42BPGQ6DT37 1551 aa10.45□□□□□ -0.74
GPHN-208ENST00000555503 RGS12O14924 1447 aa10.45□□□□□ -0.74
GPHN-208ENST00000555503 PTCH1Q13635 1447 aa10.45□□□□□ -0.74
GPHN-208ENST00000555503 ROBO2Q9HCK4 1378 aa10.45□□□□□ -0.74
GPHN-208ENST00000555503 ARID3AQ99856 593 aa10.45□□□□□ -0.74
GPHN-208ENST00000555503 GOPCQ9HD26 462 aa10.45□□□□□ -0.74
GPHN-208ENST00000555503 ABCA3Q99758 1704 aa10.44□□□□□ -0.74
GPHN-208ENST00000555503 CDK12Q9NYV4 1490 aaPredicted RBP10.44□□□□□ -0.74
GPHN-208ENST00000555503 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
GPHN-208ENST00000555503 TIE1P35590 1138 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms