RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	R3HDM1	Q15032	1099 aa	Known RBP	13.8	□□□□□ -0.2
PRKCH-215	ENST00000555382	RGL3	Q3MIN7	710 aa		13.8	□□□□□ -0.2
PRKCH-215	ENST00000555382	SPATA31A5	Q5VU36	1347 aa		13.8	□□□□□ -0.2
PRKCH-215	ENST00000555382	SPATA31A7	Q8IWB4	1347 aa		13.8	□□□□□ -0.2
PRKCH-215	ENST00000555382	PSME1	Q06323	249 aa		13.78	□□□□□ -0.2
PRKCH-215	ENST00000555382	FAM182B	Q5T319	152 aa		13.78	□□□□□ -0.2
PRKCH-215	ENST00000555382	DCAF11	Q8TEB1	546 aa		13.78	□□□□□ -0.2
PRKCH-215	ENST00000555382	CAMKK2	Q96RR4	588 aa		13.78	□□□□□ -0.2
PRKCH-215	ENST00000555382	ADGRB1	O14514	1584 aa		13.78	□□□□□ -0.2
PRKCH-215	ENST00000555382	BTG4	Q9NY30	223 aa		13.77	□□□□□ -0.21
PRKCH-215	ENST00000555382	CCDC9	Q9Y3X0	531 aa	Known RBP	13.77	□□□□□ -0.21
PRKCH-215	ENST00000555382	PARD3	Q8TEW0	1356 aa		13.76	□□□□□ -0.21
PRKCH-215	ENST00000555382	ZEB1	P37275	1124 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKCH-215	ENST00000555382	EZH2	Q15910	746 aa	Known RBP	13.76	□□□□□ -0.21
PRKCH-215	ENST00000555382	C14orf93	Q9H972	538 aa	Known RBP	13.76	□□□□□ -0.21
PRKCH-215	ENST00000555382	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.75	□□□□□ -0.21
PRKCH-215	ENST00000555382	PRR36	Q9H6K5	1346 aa		13.74	□□□□□ -0.21
PRKCH-215	ENST00000555382	HAP1	P54257	671 aa	Predicted RBP	13.74	□□□□□ -0.21
PRKCH-215	ENST00000555382	TULP4	Q9NRJ4	1543 aa		13.74	□□□□□ -0.21
PRKCH-215	ENST00000555382	TRPM1	Q7Z4N2	1603 aa		13.72	□□□□□ -0.21
PRKCH-215	ENST00000555382	SPATA31A1	Q5TZJ5	1347 aa		13.72	□□□□□ -0.21
PRKCH-215	ENST00000555382	PRAM1	Q96QH2	718 aa		13.72	□□□□□ -0.21
PRKCH-215	ENST00000555382	PLEKHG5	O94827	1062 aa		13.71	□□□□□ -0.21
PRKCH-215	ENST00000555382	PMFBP1	Q8TBY8	1022 aa		13.71	□□□□□ -0.21
PRKCH-215	ENST00000555382	LMO7	Q8WWI1	1683 aa		13.71	□□□□□ -0.21
PRKCH-215	ENST00000555382	GPRASP1	Q5JY77	1395 aa		13.71	□□□□□ -0.22
PRKCH-215	ENST00000555382		A0A0G2JS52	829 aa		13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	MYT1	Q01538	1121 aa		13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	CFAP70	Q5T0N1	1121 aa		13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	LMOD2	Q6P5Q4	547 aa		13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	KDM2A	Q9Y2K7	1162 aa		13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	RGPD4	Q7Z3J3	1758 aa		13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	PEAK1	Q9H792	1746 aa		13.7	□□□□□ -0.22
PRKCH-215	ENST00000555382	CASZ1	Q86V15	1759 aa		13.69	□□□□□ -0.22
PRKCH-215	ENST00000555382	YY1	P25490	414 aa		13.69	□□□□□ -0.22
PRKCH-215	ENST00000555382	NRK	Q7Z2Y5	1582 aa		13.69	□□□□□ -0.22
PRKCH-215	ENST00000555382	CAMTA1	Q9Y6Y1	1673 aa		13.69	□□□□□ -0.22
PRKCH-215	ENST00000555382	ATP7B	P35670	1465 aa		13.68	□□□□□ -0.22
PRKCH-215	ENST00000555382	TRIM37	O94972	964 aa		13.68	□□□□□ -0.22
PRKCH-215	ENST00000555382	KIAA0232	Q92628	1395 aa		13.68	□□□□□ -0.22
PRKCH-215	ENST00000555382	NINL	Q9Y2I6	1382 aa		13.68	□□□□□ -0.22
PRKCH-215	ENST00000555382	PARP4	Q9UKK3	1724 aa	Known RBP	13.67	□□□□□ -0.22
PRKCH-215	ENST00000555382	TOPAZ1	Q8N9V7	1692 aa		13.67	□□□□□ -0.22
PRKCH-215	ENST00000555382	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
PRKCH-215	ENST00000555382	NBPF8	Q3BBV2	869 aa		13.67	□□□□□ -0.22
PRKCH-215	ENST00000555382	FAM196A	Q6ZSG2	479 aa		13.67	□□□□□ -0.22
PRKCH-215	ENST00000555382	ITSN1	Q15811	1721 aa		13.67	□□□□□ -0.22
PRKCH-215	ENST00000555382	SSH2	Q76I76	1423 aa		13.66	□□□□□ -0.22
PRKCH-215	ENST00000555382	BARGIN	Q6ZT62	677 aa		13.65	□□□□□ -0.22
PRKCH-215	ENST00000555382	PRDM11	Q9NQV5	511 aa		13.65	□□□□□ -0.22
PRKCH-215	ENST00000555382	EIF3A	Q14152	1382 aa	Known RBP	13.65	□□□□□ -0.22
PRKCH-215	ENST00000555382	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.64	□□□□□ -0.23
PRKCH-215	ENST00000555382	SBF2	Q86WG5	1849 aa		13.64	□□□□□ -0.23
PRKCH-215	ENST00000555382	APBA3	O96018	575 aa		13.63	□□□□□ -0.23
PRKCH-215	ENST00000555382	CHRNA2	Q15822	529 aa		13.62	□□□□□ -0.23
PRKCH-215	ENST00000555382	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.62	□□□□□ -0.23
PRKCH-215	ENST00000555382	LRRC37A3	O60309	1634 aa		13.61	□□□□□ -0.23
PRKCH-215	ENST00000555382	POLR3A	O14802	1390 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCH-215	ENST00000555382	ROCK2	O75116	1388 aa	Known RBP	13.61	□□□□□ -0.23
PRKCH-215	ENST00000555382	CPD	O75976	1380 aa		13.61	□□□□□ -0.23
PRKCH-215	ENST00000555382	MYOM1	P52179	1685 aa		13.61	□□□□□ -0.23
PRKCH-215	ENST00000555382	WASL	O00401	505 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCH-215	ENST00000555382	CEP350	Q5VT06	3117 aa		13.61	□□□□□ -0.23
PRKCH-215	ENST00000555382	GOLGB1	Q14789	3259 aa	Known RBP	13.6	□□□□□ -0.23
PRKCH-215	ENST00000555382	USP19	O94966	1318 aa		13.6	□□□□□ -0.23
PRKCH-215	ENST00000555382	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKCH-215	ENST00000555382	KCNQ2	O43526	872 aa		13.59	□□□□□ -0.23
PRKCH-215	ENST00000555382	NBPF1	Q3BBV0	1214 aa		13.59	□□□□□ -0.23
PRKCH-215	ENST00000555382	SPON1	Q9HCB6	807 aa		13.59	□□□□□ -0.23
PRKCH-215	ENST00000555382	POGK	Q9P215	609 aa		13.59	□□□□□ -0.23
PRKCH-215	ENST00000555382	COL5A2	P05997	1499 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCH-215	ENST00000555382	WNK3	Q9BYP7	1800 aa		13.59	□□□□□ -0.23
PRKCH-215	ENST00000555382	SLC24A1	O60721	1099 aa		13.58	□□□□□ -0.24
PRKCH-215	ENST00000555382	LARP1	Q6PKG0	1096 aa	Known RBP	13.58	□□□□□ -0.24
PRKCH-215	ENST00000555382	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCH-215	ENST00000555382	STRN4	Q9NRL3	753 aa		13.57	□□□□□ -0.24
PRKCH-215	ENST00000555382	TRAK1	Q9UPV9	953 aa		13.57	□□□□□ -0.24
PRKCH-215	ENST00000555382	SBNO2	Q9Y2G9	1366 aa		13.57	□□□□□ -0.24
PRKCH-215	ENST00000555382	ZC3H6	P61129	1189 aa	Known RBP	13.56	□□□□□ -0.24
PRKCH-215	ENST00000555382	TCP11L2	Q8N4U5	519 aa		13.56	□□□□□ -0.24
PRKCH-215	ENST00000555382	NGDN	Q8NEJ9	315 aa	Known RBP	13.56	□□□□□ -0.24
PRKCH-215	ENST00000555382	CARD11	Q9BXL7	1154 aa		13.56	□□□□□ -0.24
PRKCH-215	ENST00000555382	OVOS2	A0A0G2JMS6	1433 aa		13.56	□□□□□ -0.24
PRKCH-215	ENST00000555382	OVOS2	A0A0J9YW53	1432 aa		13.56	□□□□□ -0.24
PRKCH-215	ENST00000555382	OVOS2	Q6IE36	1432 aa		13.56	□□□□□ -0.24
PRKCH-215	ENST00000555382	PTGER2	P43116	358 aa		13.55	□□□□□ -0.24
PRKCH-215	ENST00000555382	NBPF14	Q5TI25	921 aa		13.55	□□□□□ -0.24
PRKCH-215	ENST00000555382	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCH-215	ENST00000555382	COL18A1	P39060	1754 aa		13.55	□□□□□ -0.24
PRKCH-215	ENST00000555382	BCL9	O00512	1426 aa		13.55	□□□□□ -0.24
PRKCH-215	ENST00000555382	PLSCR1	O15162	318 aa		13.54	□□□□□ -0.24
PRKCH-215	ENST00000555382	PAK3	O75914	559 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKCH-215	ENST00000555382	PDE3B	Q13370	1112 aa		13.54	□□□□□ -0.24
PRKCH-215	ENST00000555382	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKCH-215	ENST00000555382	NUDT16	Q96DE0	195 aa	Known RBP	13.54	□□□□□ -0.24
PRKCH-215	ENST00000555382	USP35	Q9P2H5	1018 aa		13.54	□□□□□ -0.24
PRKCH-215	ENST00000555382	THRAP3	Q9Y2W1	955 aa	Known RBP	13.54	□□□□□ -0.24
PRKCH-215	ENST00000555382	PTF1A	Q7RTS3	328 aa		13.53	□□□□□ -0.24
PRKCH-215	ENST00000555382	PROM2	Q8N271	834 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms