RNA–Protein interactions for RNA: ENST00000555359.1

NSFL1C-211, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-211ENST00000555359 NWD2Q9ULI1 1742 aa30.45■■■□□ 2.47
NSFL1C-211ENST00000555359 FAM98CQ17RN3 349 aaKnown RBP30.45■■■□□ 2.47
NSFL1C-211ENST00000555359 NUTM2GQ5VZR2 741 aa30.45■■■□□ 2.47
NSFL1C-211ENST00000555359 KRT27Q7Z3Y8 459 aa30.45■■■□□ 2.47
NSFL1C-211ENST00000555359 ALS2Q96Q42 1657 aa30.45■■■□□ 2.46
NSFL1C-211ENST00000555359 DEFB132Q7Z7B7 95 aa30.43■■■□□ 2.46
NSFL1C-211ENST00000555359 ATP7BP35670 1465 aa30.43■■■□□ 2.46
NSFL1C-211ENST00000555359 PRDM11Q9NQV5 511 aa30.41■■■□□ 2.46
NSFL1C-211ENST00000555359 ACEP12821 1306 aa30.41■■■□□ 2.46
NSFL1C-211ENST00000555359 BLMP54132 1417 aaPredicted RBP30.4■■■□□ 2.46
NSFL1C-211ENST00000555359 SRCAPQ6ZRS2 3230 aa30.4■■■□□ 2.46
NSFL1C-211ENST00000555359 NBPF8Q3BBV2 869 aa30.4■■■□□ 2.46
NSFL1C-211ENST00000555359 CCDC61Q9Y6R9 512 aa30.4■■■□□ 2.46
NSFL1C-211ENST00000555359 SF3B2Q13435 895 aaKnown RBP30.39■■■□□ 2.46
NSFL1C-211ENST00000555359 CHRNA2Q15822 529 aa30.38■■■□□ 2.45
NSFL1C-211ENST00000555359 ZC3H6P61129 1189 aaKnown RBP30.37■■■□□ 2.45
NSFL1C-211ENST00000555359 COL14A1Q05707 1796 aaKnown RBP30.36■■■□□ 2.45
NSFL1C-211ENST00000555359 PLEKHG3A1L390 1219 aa30.35■■■□□ 2.45
NSFL1C-211ENST00000555359 SRPK2P78362 688 aaKnown RBP30.35■■■□□ 2.45
NSFL1C-211ENST00000555359 SPATA31A5Q5VU36 1347 aa30.35■■■□□ 2.45
NSFL1C-211ENST00000555359 SPATA31A7Q8IWB4 1347 aa30.35■■■□□ 2.45
NSFL1C-211ENST00000555359 KIAA0232Q92628 1395 aa30.35■■■□□ 2.45
NSFL1C-211ENST00000555359 NRAPQ86VF7 1730 aa30.34■■■□□ 2.45
NSFL1C-211ENST00000555359 FAM182BQ5T319 152 aa30.34■■■□□ 2.45
NSFL1C-211ENST00000555359 L3MBTL2Q969R5 705 aa30.34■■■□□ 2.45
NSFL1C-211ENST00000555359 SIN3AQ96ST3 1273 aa30.34■■■□□ 2.45
NSFL1C-211ENST00000555359 CABP2Q9NPB3 220 aa30.34■■■□□ 2.45
NSFL1C-211ENST00000555359 ITSN1Q15811 1721 aa30.33■■■□□ 2.45
NSFL1C-211ENST00000555359 KIAA1210Q9ULL0 1709 aa30.33■■■□□ 2.45
NSFL1C-211ENST00000555359 STRN4Q9NRL3 753 aa30.33■■■□□ 2.45
NSFL1C-211ENST00000555359 POLR3AO14802 1390 aaPredicted RBP30.32■■■□□ 2.44
NSFL1C-211ENST00000555359 CENPJQ9HC77 1338 aaPredicted RBP30.32■■■□□ 2.44
NSFL1C-211ENST00000555359 ABTB2Q8N961 1025 aa30.31■■■□□ 2.44
NSFL1C-211ENST00000555359 CRYBG1Q9Y4K1 1723 aa30.3■■■□□ 2.44
NSFL1C-211ENST00000555359 NEUROD1Q13562 356 aa30.29■■■□□ 2.44
NSFL1C-211ENST00000555359 EVA1CP58658 441 aa30.25■■■□□ 2.43
NSFL1C-211ENST00000555359 USP35Q9P2H5 1018 aa30.25■■■□□ 2.43
NSFL1C-211ENST00000555359 SPATA31A1Q5TZJ5 1347 aa30.24■■■□□ 2.43
NSFL1C-211ENST00000555359 PPIP5K1Q6PFW1 1433 aa30.24■■■□□ 2.43
NSFL1C-211ENST00000555359 TOPAZ1Q8N9V7 1692 aa30.23■■■□□ 2.43
NSFL1C-211ENST00000555359 CABP1Q9NZU7 370 aa30.23■■■□□ 2.43
NSFL1C-211ENST00000555359 BAG6P46379 1132 aa30.21■■■□□ 2.43
NSFL1C-211ENST00000555359 NLRP13Q86W25 1043 aa30.2■■■□□ 2.43
NSFL1C-211ENST00000555359 PHRF1Q9P1Y6 1649 aaKnown RBP30.2■■■□□ 2.43
NSFL1C-211ENST00000555359 GCP02774 474 aa30.18■■■□□ 2.42
NSFL1C-211ENST00000555359 EN1Q05925 392 aaPredicted RBP30.18■■■□□ 2.42
NSFL1C-211ENST00000555359 LARP1Q6PKG0 1096 aaKnown RBP30.17■■■□□ 2.42
NSFL1C-211ENST00000555359 ZBTB7CA1YPR0 619 aa30.16■■■□□ 2.42
NSFL1C-211ENST00000555359 USP19O94966 1318 aa30.16■■■□□ 2.42
NSFL1C-211ENST00000555359 PSDA5PKW4 1024 aaPredicted RBP30.14■■■□□ 2.42
NSFL1C-211ENST00000555359 QRICH2Q9H0J4 1663 aa30.14■■■□□ 2.41
NSFL1C-211ENST00000555359 NLRP6P59044 892 aa30.13■■■□□ 2.41
NSFL1C-211ENST00000555359 THSD7AQ9UPZ6 1657 aa30.13■■■□□ 2.41
NSFL1C-211ENST00000555359 CAMTA1Q9Y6Y1 1673 aa30.13■■■□□ 2.41
NSFL1C-211ENST00000555359 EVC2Q86UK5 1308 aa30.12■■■□□ 2.41
NSFL1C-211ENST00000555359 SSH2Q76I76 1423 aa30.12■■■□□ 2.41
NSFL1C-211ENST00000555359 TRIM37O94972 964 aa30.11■■■□□ 2.41
NSFL1C-211ENST00000555359 CPDO75976 1380 aa30.11■■■□□ 2.41
NSFL1C-211ENST00000555359 NRKQ7Z2Y5 1582 aa30.11■■■□□ 2.41
NSFL1C-211ENST00000555359 ROCK2O75116 1388 aaKnown RBP30.1■■■□□ 2.41
NSFL1C-211ENST00000555359 PDE3BQ13370 1112 aa30.09■■■□□ 2.41
NSFL1C-211ENST00000555359 FAM196AQ6ZSG2 479 aa30.09■■■□□ 2.41
NSFL1C-211ENST00000555359 BARGINQ6ZT62 677 aa30.09■■■□□ 2.41
NSFL1C-211ENST00000555359 TCP11L2Q8N4U5 519 aa30.09■■■□□ 2.41
NSFL1C-211ENST00000555359 USP6P35125 1406 aa30.07■■■□□ 2.4
NSFL1C-211ENST00000555359 EZH2Q15910 746 aaKnown RBP30.06■■■□□ 2.4
NSFL1C-211ENST00000555359 BRD4O60885 1362 aaPredicted RBP30.05■■■□□ 2.4
NSFL1C-211ENST00000555359 TRPM1Q7Z4N2 1603 aa30.05■■■□□ 2.4
NSFL1C-211ENST00000555359 APBA3O96018 575 aa30.03■■■□□ 2.4
NSFL1C-211ENST00000555359 RGPD1P0DJD0 1748 aa30.02■■■□□ 2.4
NSFL1C-211ENST00000555359 LMO7Q8WWI1 1683 aa30.01■■■□□ 2.39
NSFL1C-211ENST00000555359 R3HDM1Q15032 1099 aaKnown RBP30■■■□□ 2.39
NSFL1C-211ENST00000555359 ZNF692Q9BU19 519 aaPredicted RBP30■■■□□ 2.39
NSFL1C-211ENST00000555359 SOX12O15370 315 aa29.99■■■□□ 2.39
NSFL1C-211ENST00000555359 CAMKK2Q96RR4 588 aa29.99■■■□□ 2.39
NSFL1C-211ENST00000555359 THRAP3Q9Y2W1 955 aaKnown RBP29.99■■■□□ 2.39
NSFL1C-211ENST00000555359 TTC21BQ7Z4L5 1316 aa29.98■■■□□ 2.39
NSFL1C-211ENST00000555359 COL5A2P05997 1499 aaPredicted RBP29.98■■■□□ 2.39
NSFL1C-211ENST00000555359 AXIN2Q9Y2T1 843 aa29.97■■■□□ 2.39
NSFL1C-211ENST00000555359 AATKQ6ZMQ8 1374 aa29.96■■■□□ 2.39
NSFL1C-211ENST00000555359 DISP2A7MBM2 1401 aa29.96■■■□□ 2.39
NSFL1C-211ENST00000555359 TOM1L2Q6ZVM7 507 aa29.95■■■□□ 2.39
NSFL1C-211ENST00000555359 TNS1Q9HBL0 1735 aaKnown RBP29.94■■■□□ 2.38
NSFL1C-211ENST00000555359 CARD11Q9BXL7 1154 aa29.94■■■□□ 2.38
NSFL1C-211ENST00000555359 CRB1P82279 1406 aa29.93■■■□□ 2.38
NSFL1C-211ENST00000555359 SLIT3O75094 1523 aa29.92■■■□□ 2.38
NSFL1C-211ENST00000555359 PIK3C2AO00443 1686 aa29.91■■■□□ 2.38
NSFL1C-211ENST00000555359 ARHGEF25Q86VW2 580 aa29.9■■■□□ 2.38
NSFL1C-211ENST00000555359 KTN1Q86UP2 1357 aaKnown RBP29.9■■■□□ 2.38
NSFL1C-211ENST00000555359 KCNH5Q8NCM2 988 aa29.89■■■□□ 2.38
NSFL1C-211ENST00000555359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.88■■■□□ 2.37
NSFL1C-211ENST00000555359 TTC21AQ8NDW8 1320 aa29.88■■■□□ 2.37
NSFL1C-211ENST00000555359 TMC1Q8TDI8 760 aa29.87■■■□□ 2.37
NSFL1C-211ENST00000555359 CPSF1Q10570 1443 aaKnown RBP29.87■■■□□ 2.37
NSFL1C-211ENST00000555359 CSB-PGBD3P0DP91 1061 aa29.86■■■□□ 2.37
NSFL1C-211ENST00000555359 DDB1Q16531 1140 aa29.86■■■□□ 2.37
NSFL1C-211ENST00000555359 WDR17Q8IZU2 1322 aa29.85■■■□□ 2.37
NSFL1C-211ENST00000555359 COL18A1P39060 1754 aa29.84■■■□□ 2.37
NSFL1C-211ENST00000555359 AKAP12Q02952 1782 aa29.83■■■□□ 2.37
NSFL1C-211ENST00000555359 TONSLQ96HA7 1378 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms