RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
TMEM253-205ENST00000555314 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
TMEM253-205ENST00000555314 DISP2A7MBM2 1401 aa18.39■□□□□ 0.53
TMEM253-205ENST00000555314 ABCA3Q99758 1704 aa18.38■□□□□ 0.53
TMEM253-205ENST00000555314 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
TMEM253-205ENST00000555314 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
TMEM253-205ENST00000555314 HRCP23327 699 aa18.37■□□□□ 0.53
TMEM253-205ENST00000555314 PRDM11Q9NQV5 511 aa18.37■□□□□ 0.53
TMEM253-205ENST00000555314 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
TMEM253-205ENST00000555314 LRP5O75197 1615 aa18.37■□□□□ 0.53
TMEM253-205ENST00000555314 TRPM3Q9HCF6 1732 aaPredicted RBP18.37■□□□□ 0.53
TMEM253-205ENST00000555314 COL14A1Q05707 1796 aaKnown RBP18.36■□□□□ 0.53
TMEM253-205ENST00000555314 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
TMEM253-205ENST00000555314 ALS2Q96Q42 1657 aa18.35■□□□□ 0.53
TMEM253-205ENST00000555314 NRAPQ86VF7 1730 aa18.35■□□□□ 0.53
TMEM253-205ENST00000555314 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
TMEM253-205ENST00000555314 SPATA31A1Q5TZJ5 1347 aa18.33■□□□□ 0.53
TMEM253-205ENST00000555314 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
TMEM253-205ENST00000555314 EN1Q05925 392 aaPredicted RBP18.33■□□□□ 0.52
TMEM253-205ENST00000555314 NUDT16Q96DE0 195 aaKnown RBP18.33■□□□□ 0.52
TMEM253-205ENST00000555314 FAM196AQ6ZSG2 479 aa18.32■□□□□ 0.52
TMEM253-205ENST00000555314 KDM2AQ9Y2K7 1162 aa18.32■□□□□ 0.52
TMEM253-205ENST00000555314 ATP7BP35670 1465 aa18.32■□□□□ 0.52
TMEM253-205ENST00000555314 PARD3Q8TEW0 1356 aa18.31■□□□□ 0.52
TMEM253-205ENST00000555314 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
TMEM253-205ENST00000555314 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
TMEM253-205ENST00000555314 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
TMEM253-205ENST00000555314 BARGINQ6ZT62 677 aa18.3■□□□□ 0.52
TMEM253-205ENST00000555314 CCDC61Q9Y6R9 512 aa18.3■□□□□ 0.52
TMEM253-205ENST00000555314 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
TMEM253-205ENST00000555314 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
TMEM253-205ENST00000555314 CAMKK2Q96RR4 588 aa18.28■□□□□ 0.52
TMEM253-205ENST00000555314 CDK19Q9BWU1 502 aa18.27■□□□□ 0.52
TMEM253-205ENST00000555314 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
TMEM253-205ENST00000555314 R3HDM1Q15032 1099 aaKnown RBP18.26■□□□□ 0.51
TMEM253-205ENST00000555314 NBPF8Q3BBV2 869 aa18.26■□□□□ 0.51
TMEM253-205ENST00000555314 FAM182BQ5T319 152 aa18.26■□□□□ 0.51
TMEM253-205ENST00000555314 CPDO75976 1380 aa18.26■□□□□ 0.51
TMEM253-205ENST00000555314 CHRNA2Q15822 529 aa18.25■□□□□ 0.51
TMEM253-205ENST00000555314 RGPD1P0DJD0 1748 aa18.25■□□□□ 0.51
TMEM253-205ENST00000555314 CRYBG1Q9Y4K1 1723 aa18.25■□□□□ 0.51
TMEM253-205ENST00000555314 ACEP12821 1306 aa18.24■□□□□ 0.51
TMEM253-205ENST00000555314 TRIM37O94972 964 aa18.24■□□□□ 0.51
TMEM253-205ENST00000555314 ZC3H6P61129 1189 aaKnown RBP18.24■□□□□ 0.51
TMEM253-205ENST00000555314 EZH2Q15910 746 aaKnown RBP18.24■□□□□ 0.51
TMEM253-205ENST00000555314 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
TMEM253-205ENST00000555314 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
TMEM253-205ENST00000555314 USP19O94966 1318 aa18.23■□□□□ 0.51
TMEM253-205ENST00000555314 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
TMEM253-205ENST00000555314 EVA1CP58658 441 aa18.23■□□□□ 0.51
TMEM253-205ENST00000555314 STRN4Q9NRL3 753 aa18.23■□□□□ 0.51
TMEM253-205ENST00000555314 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
TMEM253-205ENST00000555314 TCP11L2Q8N4U5 519 aa18.22■□□□□ 0.51
TMEM253-205ENST00000555314 APBA3O96018 575 aa18.21■□□□□ 0.51
TMEM253-205ENST00000555314 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
TMEM253-205ENST00000555314 ABTB2Q8N961 1025 aa18.21■□□□□ 0.51
TMEM253-205ENST00000555314 ITSN1Q15811 1721 aa18.2■□□□□ 0.5
TMEM253-205ENST00000555314 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
TMEM253-205ENST00000555314 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
TMEM253-205ENST00000555314 GCP02774 474 aa18.18■□□□□ 0.5
TMEM253-205ENST00000555314 NUTM2GQ5VZR2 741 aa18.18■□□□□ 0.5
TMEM253-205ENST00000555314 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
TMEM253-205ENST00000555314 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
TMEM253-205ENST00000555314 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
TMEM253-205ENST00000555314 CAMTA1Q9Y6Y1 1673 aa18.17■□□□□ 0.5
TMEM253-205ENST00000555314 TNS1Q9HBL0 1735 aaKnown RBP18.17■□□□□ 0.5
TMEM253-205ENST00000555314 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
TMEM253-205ENST00000555314 MSH5O43196 834 aa18.14■□□□□ 0.49
TMEM253-205ENST00000555314 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
TMEM253-205ENST00000555314 TOPAZ1Q8N9V7 1692 aa18.13■□□□□ 0.49
TMEM253-205ENST00000555314 KIAA1210Q9ULL0 1709 aa18.13■□□□□ 0.49
TMEM253-205ENST00000555314 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
TMEM253-205ENST00000555314 CENPJQ9HC77 1338 aaPredicted RBP18.13■□□□□ 0.49
TMEM253-205ENST00000555314 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
TMEM253-205ENST00000555314 NBPF1Q3BBV0 1214 aa18.12■□□□□ 0.49
TMEM253-205ENST00000555314 PPIP5K1Q6PFW1 1433 aa18.12■□□□□ 0.49
TMEM253-205ENST00000555314 LMO7Q8WWI1 1683 aa18.12■□□□□ 0.49
TMEM253-205ENST00000555314 CRB1P82279 1406 aa18.11■□□□□ 0.49
TMEM253-205ENST00000555314 COL5A2P05997 1499 aaPredicted RBP18.11■□□□□ 0.49
TMEM253-205ENST00000555314 PLSCR1O15162 318 aa18.1■□□□□ 0.49
TMEM253-205ENST00000555314 SPON1Q9HCB6 807 aa18.1■□□□□ 0.49
TMEM253-205ENST00000555314 CDCA7Q9BWT1 371 aaPredicted RBP18.09■□□□□ 0.49
TMEM253-205ENST00000555314 OVOS2A0A0G2JMS6 1433 aa18.08■□□□□ 0.49
TMEM253-205ENST00000555314 OVOS2A0A0J9YW53 1432 aa18.08■□□□□ 0.49
TMEM253-205ENST00000555314 USP6P35125 1406 aa18.08■□□□□ 0.49
TMEM253-205ENST00000555314 OVOS2Q6IE36 1432 aa18.08■□□□□ 0.49
TMEM253-205ENST00000555314 NLRP6P59044 892 aa18.08■□□□□ 0.48
TMEM253-205ENST00000555314 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
TMEM253-205ENST00000555314 BCL9O00512 1426 aa18.07■□□□□ 0.48
TMEM253-205ENST00000555314 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
TMEM253-205ENST00000555314 KCNQ2O43526 872 aa18.06■□□□□ 0.48
TMEM253-205ENST00000555314 DDB1Q16531 1140 aa18.06■□□□□ 0.48
TMEM253-205ENST00000555314 BCL11BQ9C0K0 894 aaPredicted RBP18.06■□□□□ 0.48
TMEM253-205ENST00000555314 RREB1Q92766 1687 aa18.06■□□□□ 0.48
TMEM253-205ENST00000555314 NINLQ9Y2I6 1382 aa18.05■□□□□ 0.48
TMEM253-205ENST00000555314 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
TMEM253-205ENST00000555314 WDR17Q8IZU2 1322 aa18.04■□□□□ 0.48
TMEM253-205ENST00000555314 SLIT3O75094 1523 aa18.04■□□□□ 0.48
TMEM253-205ENST00000555314 PARP4Q9UKK3 1724 aaKnown RBP18.04■□□□□ 0.48
TMEM253-205ENST00000555314 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms