RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 TULP4Q9NRJ4 1543 aa12.06□□□□□ -0.48
TRIM9-204ENST00000555170 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
TRIM9-204ENST00000555170 POGKQ9P215 609 aa12.06□□□□□ -0.48
TRIM9-204ENST00000555170 MINK1Q8N4C8 1332 aaPredicted RBP12.06□□□□□ -0.48
TRIM9-204ENST00000555170 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
TRIM9-204ENST00000555170 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
TRIM9-204ENST00000555170 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
TRIM9-204ENST00000555170 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
TRIM9-204ENST00000555170 CAMKK2Q96RR4 588 aa12.05□□□□□ -0.48
TRIM9-204ENST00000555170 HIRIP3Q9BW71 556 aaPredicted RBP12.05□□□□□ -0.48
TRIM9-204ENST00000555170 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
TRIM9-204ENST00000555170 ATP7BP35670 1465 aa12.04□□□□□ -0.48
TRIM9-204ENST00000555170 FAM83GA6ND36 823 aa12.04□□□□□ -0.48
TRIM9-204ENST00000555170 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
TRIM9-204ENST00000555170 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
TRIM9-204ENST00000555170 KRT28Q7Z3Y7 464 aa12.03□□□□□ -0.48
TRIM9-204ENST00000555170 PPP1R1BQ9UD71 204 aaPredicted RBP12.03□□□□□ -0.48
TRIM9-204ENST00000555170 PRR36Q9H6K5 1346 aa12.03□□□□□ -0.48
TRIM9-204ENST00000555170 CCER1Q8TC90 406 aaPredicted RBP12.02□□□□□ -0.49
TRIM9-204ENST00000555170 DISP2A7MBM2 1401 aa12.02□□□□□ -0.49
TRIM9-204ENST00000555170 TRPM3Q9HCF6 1732 aaPredicted RBP12.01□□□□□ -0.49
TRIM9-204ENST00000555170 CENPJQ9HC77 1338 aaPredicted RBP12.01□□□□□ -0.49
TRIM9-204ENST00000555170 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
TRIM9-204ENST00000555170 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
TRIM9-204ENST00000555170 TRIM37O94972 964 aa12□□□□□ -0.49
TRIM9-204ENST00000555170 C1QTNF8P60827 252 aa12□□□□□ -0.49
TRIM9-204ENST00000555170 SPON1Q9HCB6 807 aa12□□□□□ -0.49
TRIM9-204ENST00000555170 ABCA3Q99758 1704 aa12□□□□□ -0.49
TRIM9-204ENST00000555170 UTRNP46939 3433 aa11.99□□□□□ -0.49
TRIM9-204ENST00000555170 KCNQ2O43526 872 aa11.99□□□□□ -0.49
TRIM9-204ENST00000555170 APBA3O96018 575 aa11.99□□□□□ -0.49
TRIM9-204ENST00000555170 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
TRIM9-204ENST00000555170 PLCH1Q4KWH8 1693 aa11.98□□□□□ -0.49
TRIM9-204ENST00000555170 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
TRIM9-204ENST00000555170 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
TRIM9-204ENST00000555170 CARD11Q9BXL7 1154 aa11.98□□□□□ -0.49
TRIM9-204ENST00000555170 NWD2Q9ULI1 1742 aa11.97□□□□□ -0.49
TRIM9-204ENST00000555170 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
TRIM9-204ENST00000555170 NINLQ9Y2I6 1382 aa11.97□□□□□ -0.49
TRIM9-204ENST00000555170 NBPF14Q5TI25 921 aa11.97□□□□□ -0.49
TRIM9-204ENST00000555170 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
TRIM9-204ENST00000555170 CAMTA1Q9Y6Y1 1673 aa11.97□□□□□ -0.49
TRIM9-204ENST00000555170 CDK19Q9BWU1 502 aa11.96□□□□□ -0.49
TRIM9-204ENST00000555170 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
TRIM9-204ENST00000555170 CRYBG1Q9Y4K1 1723 aa11.96□□□□□ -0.49
TRIM9-204ENST00000555170 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
TRIM9-204ENST00000555170 PSME1Q06323 249 aa11.95□□□□□ -0.5
TRIM9-204ENST00000555170 FAM196AQ6ZSG2 479 aa11.95□□□□□ -0.5
TRIM9-204ENST00000555170 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
TRIM9-204ENST00000555170 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
TRIM9-204ENST00000555170 TNS3Q68CZ2 1445 aa11.94□□□□□ -0.5
TRIM9-204ENST00000555170 SPATA31A5Q5VU36 1347 aa11.94□□□□□ -0.5
TRIM9-204ENST00000555170 SPATA31A7Q8IWB4 1347 aa11.94□□□□□ -0.5
TRIM9-204ENST00000555170 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
TRIM9-204ENST00000555170 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
TRIM9-204ENST00000555170 PARD3Q8TEW0 1356 aa11.93□□□□□ -0.5
TRIM9-204ENST00000555170 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
TRIM9-204ENST00000555170 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
TRIM9-204ENST00000555170 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
TRIM9-204ENST00000555170 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
TRIM9-204ENST00000555170 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
TRIM9-204ENST00000555170 USP47Q96K76 1375 aa11.92□□□□□ -0.5
TRIM9-204ENST00000555170 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
TRIM9-204ENST00000555170 SRPK2P78362 688 aaKnown RBP11.91□□□□□ -0.5
TRIM9-204ENST00000555170 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
TRIM9-204ENST00000555170 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
TRIM9-204ENST00000555170 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
TRIM9-204ENST00000555170 CEP350Q5VT06 3117 aa11.9□□□□□ -0.5
TRIM9-204ENST00000555170 ST20-MTHFSA0A0A6YYL1 179 aa11.89□□□□□ -0.51
TRIM9-204ENST00000555170 TESK2Q96S53 571 aa11.89□□□□□ -0.51
TRIM9-204ENST00000555170 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
TRIM9-204ENST00000555170 MYOM1P52179 1685 aa11.89□□□□□ -0.51
TRIM9-204ENST00000555170 THSD7AQ9UPZ6 1657 aa11.89□□□□□ -0.51
TRIM9-204ENST00000555170 ARHGEF10O15013 1369 aa11.89□□□□□ -0.51
TRIM9-204ENST00000555170 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
TRIM9-204ENST00000555170 ACEP12821 1306 aa11.88□□□□□ -0.51
TRIM9-204ENST00000555170 PIK3C2AO00443 1686 aa11.88□□□□□ -0.51
TRIM9-204ENST00000555170 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
TRIM9-204ENST00000555170 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
TRIM9-204ENST00000555170 PDGFDQ9GZP0 370 aaPredicted RBP11.88□□□□□ -0.51
TRIM9-204ENST00000555170 RREB1Q92766 1687 aa11.87□□□□□ -0.51
TRIM9-204ENST00000555170 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
TRIM9-204ENST00000555170 CD163L1Q9NR16 1453 aa11.87□□□□□ -0.51
TRIM9-204ENST00000555170 USP6P35125 1406 aa11.86□□□□□ -0.51
TRIM9-204ENST00000555170 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
TRIM9-204ENST00000555170 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
TRIM9-204ENST00000555170 PTGER2P43116 358 aa11.85□□□□□ -0.51
TRIM9-204ENST00000555170 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
TRIM9-204ENST00000555170 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
TRIM9-204ENST00000555170 USP35Q9P2H5 1018 aa11.85□□□□□ -0.51
TRIM9-204ENST00000555170 CPSF1Q10570 1443 aaKnown RBP11.85□□□□□ -0.51
TRIM9-204ENST00000555170 SSH2Q76I76 1423 aa11.85□□□□□ -0.51
TRIM9-204ENST00000555170 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
TRIM9-204ENST00000555170 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
TRIM9-204ENST00000555170 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
TRIM9-204ENST00000555170 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
TRIM9-204ENST00000555170 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
TRIM9-204ENST00000555170 FHDC1Q9C0D6 1143 aaPredicted RBP11.83□□□□□ -0.52
TRIM9-204ENST00000555170 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
TRIM9-204ENST00000555170 PRDM11Q9NQV5 511 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms