RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
PSEN1-211ENST00000554995 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
PSEN1-211ENST00000554995 PNMA1Q8ND90 353 aa9.5□□□□□ -0.89
PSEN1-211ENST00000554995 ANKK1Q8NFD2 765 aa9.5□□□□□ -0.89
PSEN1-211ENST00000554995 GZF1Q9H116 711 aaPredicted RBP9.5□□□□□ -0.89
PSEN1-211ENST00000554995 RNF19BQ6ZMZ0 732 aa9.49□□□□□ -0.89
PSEN1-211ENST00000554995 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.49□□□□□ -0.89
PSEN1-211ENST00000554995 GFRA3O60609 400 aa9.48□□□□□ -0.89
PSEN1-211ENST00000554995 EIF4G2P78344 907 aaKnown RBP eCLIP9.48□□□□□ -0.89
PSEN1-211ENST00000554995 TMCO4Q5TGY1 634 aa9.48□□□□□ -0.89
PSEN1-211ENST00000554995 BLOC1S3Q6QNY0 202 aa9.48□□□□□ -0.89
PSEN1-211ENST00000554995 NYAP1Q6ZVC0 841 aa9.48□□□□□ -0.89
PSEN1-211ENST00000554995 PRR14Q9BWN1 585 aa9.48□□□□□ -0.89
PSEN1-211ENST00000554995 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
PSEN1-211ENST00000554995 NR1H3Q13133 447 aa9.47□□□□□ -0.89
PSEN1-211ENST00000554995 TBC1D9Q6ZT07 1266 aa9.47□□□□□ -0.89
PSEN1-211ENST00000554995 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
PSEN1-211ENST00000554995 BRD1O95696 1058 aa9.46□□□□□ -0.9
PSEN1-211ENST00000554995 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
PSEN1-211ENST00000554995 ZNF775Q96BV0 537 aaPredicted RBP9.46□□□□□ -0.9
PSEN1-211ENST00000554995 USB1Q9BQ65 265 aaKnown RBP9.46□□□□□ -0.9
PSEN1-211ENST00000554995 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
PSEN1-211ENST00000554995 PATL2C9JE40 543 aaKnown RBP9.45□□□□□ -0.9
PSEN1-211ENST00000554995 ATG7O95352 703 aa9.45□□□□□ -0.9
PSEN1-211ENST00000554995 FBXO45P0C2W1 286 aa9.45□□□□□ -0.9
PSEN1-211ENST00000554995 BRICD5Q6PL45 260 aa9.45□□□□□ -0.9
PSEN1-211ENST00000554995 ATP9BO43861 1147 aa9.44□□□□□ -0.9
PSEN1-211ENST00000554995 KCNA1Q09470 495 aa9.44□□□□□ -0.9
PSEN1-211ENST00000554995 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
PSEN1-211ENST00000554995 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
PSEN1-211ENST00000554995 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-211ENST00000554995 FKBPLQ9UIM3 349 aa9.43□□□□□ -0.9
PSEN1-211ENST00000554995 APLP1P51693 650 aa9.42□□□□□ -0.9
PSEN1-211ENST00000554995 MFAP1P55081 439 aaKnown RBP9.42□□□□□ -0.9
PSEN1-211ENST00000554995 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
PSEN1-211ENST00000554995 THAP11Q96EK4 314 aa9.42□□□□□ -0.9
PSEN1-211ENST00000554995 TMEM88BA6NKF7 163 aa9.41□□□□□ -0.9
PSEN1-211ENST00000554995 NRG2O14511 850 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-211ENST00000554995 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-211ENST00000554995 JUNDP17535 347 aa9.41□□□□□ -0.9
PSEN1-211ENST00000554995 PPP4CP60510 307 aa9.41□□□□□ -0.9
PSEN1-211ENST00000554995 SCUBE3Q8IX30 993 aa9.41□□□□□ -0.9
PSEN1-211ENST00000554995 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
PSEN1-211ENST00000554995 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
PSEN1-211ENST00000554995 HPS5Q9UPZ3 1129 aa9.41□□□□□ -0.9
PSEN1-211ENST00000554995 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
PSEN1-211ENST00000554995 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
PSEN1-211ENST00000554995 PTPRNQ16849 979 aa9.4□□□□□ -0.9
PSEN1-211ENST00000554995 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
PSEN1-211ENST00000554995 NR1I2O75469 434 aa9.39□□□□□ -0.91
PSEN1-211ENST00000554995 VRTNQ9H8Y1 702 aa9.39□□□□□ -0.91
PSEN1-211ENST00000554995 BCAMP50895 628 aa9.38□□□□□ -0.91
PSEN1-211ENST00000554995 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-211ENST00000554995 TSR3Q9UJK0 312 aaKnown RBP9.38□□□□□ -0.91
PSEN1-211ENST00000554995 MTMR7Q9Y216 660 aa9.38□□□□□ -0.91
PSEN1-211ENST00000554995 KCNC4Q03721 635 aa9.37□□□□□ -0.91
PSEN1-211ENST00000554995 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
PSEN1-211ENST00000554995 CTHP32929 405 aa9.36□□□□□ -0.91
PSEN1-211ENST00000554995 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
PSEN1-211ENST00000554995 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
PSEN1-211ENST00000554995 SKIP12755 728 aa9.35□□□□□ -0.91
PSEN1-211ENST00000554995 USP17L2Q6R6M4 530 aa9.35□□□□□ -0.91
PSEN1-211ENST00000554995 USP17L1Q7RTZ2 530 aa9.35□□□□□ -0.91
PSEN1-211ENST00000554995 IVNS1ABPQ9Y6Y0 642 aa9.35□□□□□ -0.91
PSEN1-211ENST00000554995 ELOAQ14241 798 aaKnown RBP9.34□□□□□ -0.91
PSEN1-211ENST00000554995 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
PSEN1-211ENST00000554995 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
PSEN1-211ENST00000554995 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
PSEN1-211ENST00000554995 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
PSEN1-211ENST00000554995 CCNYL3P0C7X3 344 aa9.33□□□□□ -0.92
PSEN1-211ENST00000554995 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
PSEN1-211ENST00000554995 EVA1BQ9NVM1 165 aa9.33□□□□□ -0.92
PSEN1-211ENST00000554995 ZMIZ1Q9ULJ6 1067 aa9.33□□□□□ -0.92
PSEN1-211ENST00000554995 PTK2Q05397 1052 aa9.32□□□□□ -0.92
PSEN1-211ENST00000554995 DEPDC4Q8N2C3 294 aa9.32□□□□□ -0.92
PSEN1-211ENST00000554995 FAM160A2Q8N612 972 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-211ENST00000554995 STK32AQ8WU08 396 aa9.32□□□□□ -0.92
PSEN1-211ENST00000554995 NUDT12Q9BQG2 462 aa9.32□□□□□ -0.92
PSEN1-211ENST00000554995 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
PSEN1-211ENST00000554995 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
PSEN1-211ENST00000554995 KCNH2Q12809 1159 aa9.31□□□□□ -0.92
PSEN1-211ENST00000554995 TMEM164Q5U3C3 297 aa9.31□□□□□ -0.92
PSEN1-211ENST00000554995 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
PSEN1-211ENST00000554995 ARMC2Q8NEN0 867 aa9.31□□□□□ -0.92
PSEN1-211ENST00000554995 GPKOWQ92917 476 aaPredicted RBP eCLIP9.31□□□□□ -0.92
PSEN1-211ENST00000554995 SPSB2Q99619 263 aa9.31□□□□□ -0.92
PSEN1-211ENST00000554995 OCSTAMPQ9BR26 566 aa9.31□□□□□ -0.92
PSEN1-211ENST00000554995 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
PSEN1-211ENST00000554995 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
PSEN1-211ENST00000554995 MMP16P51512 607 aa9.3□□□□□ -0.92
PSEN1-211ENST00000554995 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-211ENST00000554995 FOXD4L4Q8WXT5 416 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-211ENST00000554995 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
PSEN1-211ENST00000554995 SLFNL1Q499Z3 407 aa9.29□□□□□ -0.92
PSEN1-211ENST00000554995 NBPF14Q5TI25 921 aa9.29□□□□□ -0.92
PSEN1-211ENST00000554995 B4GALNT3Q6L9W6 998 aa9.29□□□□□ -0.92
PSEN1-211ENST00000554995 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
PSEN1-211ENST00000554995 MKRN1Q9UHC7 482 aaKnown RBP9.29□□□□□ -0.92
PSEN1-211ENST00000554995 PCDHB9Q9Y5E1 797 aa9.29□□□□□ -0.92
PSEN1-211ENST00000554995 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms