RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 EFCAB5A4FU69 1503 aa7.76□□□□□ -1.17
ATXN3-231ENST00000554994 FHOD3Q2V2M9 1422 aa7.76□□□□□ -1.17
ATXN3-231ENST00000554994 POTEAQ6S8J7 498 aa7.75□□□□□ -1.17
ATXN3-231ENST00000554994 SPRYD3Q8NCJ5 442 aa7.75□□□□□ -1.17
ATXN3-231ENST00000554994 ARIH1Q9Y4X5 557 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-231ENST00000554994 CAMSAP1Q5T5Y3 1602 aa7.74□□□□□ -1.17
ATXN3-231ENST00000554994 ZMYM4Q5VZL5 1548 aa7.74□□□□□ -1.17
ATXN3-231ENST00000554994 CFHP08603 1231 aa7.74□□□□□ -1.17
ATXN3-231ENST00000554994 DNAJB2P25686 324 aa7.74□□□□□ -1.17
ATXN3-231ENST00000554994 AAASQ9NRG9 546 aa7.74□□□□□ -1.17
ATXN3-231ENST00000554994 TOM1O60784 492 aa7.73□□□□□ -1.17
ATXN3-231ENST00000554994 ADH1BP00325 375 aa7.73□□□□□ -1.17
ATXN3-231ENST00000554994 PLA2G2CQ5R387 149 aa7.73□□□□□ -1.17
ATXN3-231ENST00000554994 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-231ENST00000554994 SLC6A16Q9GZN6 736 aa7.73□□□□□ -1.17
ATXN3-231ENST00000554994 HECW1Q76N89 1606 aa7.73□□□□□ -1.17
ATXN3-231ENST00000554994 ATP10BO94823 1461 aa7.73□□□□□ -1.17
ATXN3-231ENST00000554994 ACTN4O43707 911 aaKnown RBP7.72□□□□□ -1.17
ATXN3-231ENST00000554994 C3P01024 1663 aa7.71□□□□□ -1.18
ATXN3-231ENST00000554994 FAM161AQ3B820 660 aa7.71□□□□□ -1.18
ATXN3-231ENST00000554994 RBM46Q8TBY0 533 aaKnown RBP7.71□□□□□ -1.18
ATXN3-231ENST00000554994 SETD1BQ9UPS6 1966 aaKnown RBP7.71□□□□□ -1.18
ATXN3-231ENST00000554994 C9orf84Q5VXU9 1444 aa7.7□□□□□ -1.18
ATXN3-231ENST00000554994 NR1I2O75469 434 aa7.7□□□□□ -1.18
ATXN3-231ENST00000554994 CFAP44Q96MT7 982 aa7.7□□□□□ -1.18
ATXN3-231ENST00000554994 TMEM134Q9H6X4 195 aa7.7□□□□□ -1.18
ATXN3-231ENST00000554994 DACH1Q9UI36 760 aa7.7□□□□□ -1.18
ATXN3-231ENST00000554994 ATP10AO60312 1499 aa7.69□□□□□ -1.18
ATXN3-231ENST00000554994 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-231ENST00000554994 ALKQ9UM73 1620 aa7.69□□□□□ -1.18
ATXN3-231ENST00000554994 TRAPPC8Q9Y2L5 1435 aa7.69□□□□□ -1.18
ATXN3-231ENST00000554994 MAGI2Q86UL8 1455 aa7.68□□□□□ -1.18
ATXN3-231ENST00000554994 RCCD1A6NED2 376 aa7.68□□□□□ -1.18
ATXN3-231ENST00000554994 MLLT3P42568 568 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-231ENST00000554994 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-231ENST00000554994 C11orf95C9JLR9 678 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-231ENST00000554994 WFS1O76024 890 aa7.67□□□□□ -1.18
ATXN3-231ENST00000554994 PUS10Q3MIT2 529 aaKnown RBP7.67□□□□□ -1.18
ATXN3-231ENST00000554994 P3H3Q8IVL6 736 aa7.67□□□□□ -1.18
ATXN3-231ENST00000554994 PKD2L1Q9P0L9 805 aa7.67□□□□□ -1.18
ATXN3-231ENST00000554994 GMPR2Q9P2T1 348 aaKnown RBP7.67□□□□□ -1.18
ATXN3-231ENST00000554994 ADGRG1Q9Y653 693 aa7.67□□□□□ -1.18
ATXN3-231ENST00000554994 SLC10A3P09131 477 aa7.66□□□□□ -1.18
ATXN3-231ENST00000554994 PAXIP1Q6ZW49 1069 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-231ENST00000554994 SCAPERQ9BY12 1400 aa7.66□□□□□ -1.18
ATXN3-231ENST00000554994 GOLGA3Q08378 1498 aa7.66□□□□□ -1.18
ATXN3-231ENST00000554994 CFAP74Q9C0B2 1584 aa7.66□□□□□ -1.18
ATXN3-231ENST00000554994 NUTM2FA1L443 756 aa7.65□□□□□ -1.18
ATXN3-231ENST00000554994 AXIN1O15169 862 aa7.65□□□□□ -1.18
ATXN3-231ENST00000554994 RANGAP1P46060 587 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-231ENST00000554994 PTGDRQ13258 359 aa7.65□□□□□ -1.18
ATXN3-231ENST00000554994 SCUBE3Q8IX30 993 aa7.65□□□□□ -1.18
ATXN3-231ENST00000554994 SPSB2Q99619 263 aa7.65□□□□□ -1.18
ATXN3-231ENST00000554994 ESF1Q9H501 851 aaKnown RBP7.65□□□□□ -1.18
ATXN3-231ENST00000554994 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.19
ATXN3-231ENST00000554994 RAPGEF2Q9Y4G8 1499 aa7.64□□□□□ -1.19
ATXN3-231ENST00000554994 CYP4X1Q8N118 509 aa7.64□□□□□ -1.19
ATXN3-231ENST00000554994 CPS1P31327 1500 aa7.63□□□□□ -1.19
ATXN3-231ENST00000554994 TCOF1Q13428 1488 aaKnown RBP7.63□□□□□ -1.19
ATXN3-231ENST00000554994 PTPRKQ15262 1439 aa7.63□□□□□ -1.19
ATXN3-231ENST00000554994 SHANK2Q9UPX8 1470 aa7.62□□□□□ -1.19
ATXN3-231ENST00000554994 LMOD2Q6P5Q4 547 aa7.62□□□□□ -1.19
ATXN3-231ENST00000554994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATXN3-231ENST00000554994 PLA2R1Q13018 1463 aa7.62□□□□□ -1.19
ATXN3-231ENST00000554994 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
ATXN3-231ENST00000554994 TRIM52Q96A61 297 aa7.61□□□□□ -1.19
ATXN3-231ENST00000554994 FCF1Q9Y324 198 aaKnown RBP7.61□□□□□ -1.19
ATXN3-231ENST00000554994 SUPT6HQ7KZ85 1726 aaKnown RBP7.61□□□□□ -1.19
ATXN3-231ENST00000554994 MYO3AQ8NEV4 1616 aa7.6□□□□□ -1.19
ATXN3-231ENST00000554994 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
ATXN3-231ENST00000554994 CRIPAKQ8N1N5 446 aa7.6□□□□□ -1.19
ATXN3-231ENST00000554994 TOR4AQ9NXH8 423 aa7.6□□□□□ -1.19
ATXN3-231ENST00000554994 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
ATXN3-231ENST00000554994 DIP2CQ9Y2E4 1556 aa7.59□□□□□ -1.19
ATXN3-231ENST00000554994 CEP170BQ9Y4F5 1589 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-231ENST00000554994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.59□□□□□ -1.19
ATXN3-231ENST00000554994 TTC24A2A3L6 582 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-231ENST00000554994 AVPP01185 164 aa7.59□□□□□ -1.19
ATXN3-231ENST00000554994 RPIAP49247 311 aa7.59□□□□□ -1.19
ATXN3-231ENST00000554994 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
ATXN3-231ENST00000554994 AMER1Q5JTC6 1135 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-231ENST00000554994 RAPGEF6Q8TEU7 1601 aa7.59□□□□□ -1.19
ATXN3-231ENST00000554994 ZNF142P52746 1687 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-231ENST00000554994 NUP153P49790 1475 aaKnown RBP7.58□□□□□ -1.2
ATXN3-231ENST00000554994 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
ATXN3-231ENST00000554994 INSM1Q01101 510 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-231ENST00000554994 RSPH4AQ5TD94 716 aa7.58□□□□□ -1.2
ATXN3-231ENST00000554994 AFAP1Q8N556 730 aa7.58□□□□□ -1.2
ATXN3-231ENST00000554994 NPATQ14207 1427 aa7.58□□□□□ -1.2
ATXN3-231ENST00000554994 ABCA6Q8N139 1617 aa7.57□□□□□ -1.2
ATXN3-231ENST00000554994 CTC1Q2NKJ3 1217 aa7.57□□□□□ -1.2
ATXN3-231ENST00000554994 RDH13Q8NBN7 331 aa7.57□□□□□ -1.2
ATXN3-231ENST00000554994 CNTLNQ9NXG0 1405 aa7.57□□□□□ -1.2
ATXN3-231ENST00000554994 VWDEQ8N2E2 1590 aa7.57□□□□□ -1.2
ATXN3-231ENST00000554994 NEURL4Q96JN8 1562 aa7.57□□□□□ -1.2
ATXN3-231ENST00000554994 PLEKHD1A6NEE1 506 aa7.56□□□□□ -1.2
ATXN3-231ENST00000554994 AGLP35573 1532 aa7.56□□□□□ -1.2
ATXN3-231ENST00000554994 ZMYM3Q14202 1370 aa7.56□□□□□ -1.2
ATXN3-231ENST00000554994 RNF17Q9BXT8 1623 aaKnown RBP7.56□□□□□ -1.2
ATXN3-231ENST00000554994 ZBTB24O43167 697 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms