RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
TMEM260-205ENST00000554981 BRINP3Q76B58 766 aa8.39□□□□□ -1.07
TMEM260-205ENST00000554981 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.39□□□□□ -1.07
TMEM260-205ENST00000554981 ADGRB3O60242 1522 aa8.39□□□□□ -1.07
TMEM260-205ENST00000554981 NOS1P29475 1434 aa8.38□□□□□ -1.07
TMEM260-205ENST00000554981 ROCK1Q13464 1354 aa8.38□□□□□ -1.07
TMEM260-205ENST00000554981 E9PCH4 1651 aa8.38□□□□□ -1.07
TMEM260-205ENST00000554981 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-205ENST00000554981 IRX5P78411 483 aaPredicted RBP8.38□□□□□ -1.07
TMEM260-205ENST00000554981 NBR1Q14596 966 aa8.38□□□□□ -1.07
TMEM260-205ENST00000554981 DEFB132Q7Z7B7 95 aa8.38□□□□□ -1.07
TMEM260-205ENST00000554981 SLC39A7Q92504 469 aa8.38□□□□□ -1.07
TMEM260-205ENST00000554981 DDX17Q92841 729 aaKnown RBP8.38□□□□□ -1.07
TMEM260-205ENST00000554981 IQGAP3Q86VI3 1631 aa8.38□□□□□ -1.07
TMEM260-205ENST00000554981 CHD2O14647 1828 aaKnown RBP8.38□□□□□ -1.07
TMEM260-205ENST00000554981 IDI1Q13907 227 aa8.37□□□□□ -1.07
TMEM260-205ENST00000554981 RRBP1Q9P2E9 1410 aaKnown RBP8.37□□□□□ -1.07
TMEM260-205ENST00000554981 C7P10643 843 aa8.36□□□□□ -1.07
TMEM260-205ENST00000554981 ATF3P18847 181 aa8.36□□□□□ -1.07
TMEM260-205ENST00000554981 YY1P25490 414 aa8.36□□□□□ -1.07
TMEM260-205ENST00000554981 IFFO2Q5TF58 517 aa8.36□□□□□ -1.07
TMEM260-205ENST00000554981 PDCD7Q8N8D1 485 aaKnown RBP8.36□□□□□ -1.07
TMEM260-205ENST00000554981 L3MBTL3Q96JM7 780 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-205ENST00000554981 LARP6Q9BRS8 491 aaKnown RBP8.36□□□□□ -1.07
TMEM260-205ENST00000554981 USP21Q9UK80 565 aa8.36□□□□□ -1.07
TMEM260-205ENST00000554981 PNPLA6Q8IY17 1366 aa8.35□□□□□ -1.07
TMEM260-205ENST00000554981 ASXL1Q8IXJ9 1541 aa8.35□□□□□ -1.07
TMEM260-205ENST00000554981 RPRD2Q5VT52 1461 aaKnown RBP8.35□□□□□ -1.07
TMEM260-205ENST00000554981 POTEB2H3BUK9 544 aa8.35□□□□□ -1.07
TMEM260-205ENST00000554981 CCDC125Q86Z20 511 aa8.35□□□□□ -1.07
TMEM260-205ENST00000554981 BOLA1Q9Y3E2 137 aa8.35□□□□□ -1.07
TMEM260-205ENST00000554981 SETD5Q9C0A6 1442 aa8.35□□□□□ -1.07
TMEM260-205ENST00000554981 NUP155O75694 1391 aa8.35□□□□□ -1.07
TMEM260-205ENST00000554981 TMEM131LA2VDJ0 1609 aa8.34□□□□□ -1.07
TMEM260-205ENST00000554981 NHSL1Q5SYE7 1610 aa8.34□□□□□ -1.07
TMEM260-205ENST00000554981 C19orf44Q9H6X5 657 aa8.34□□□□□ -1.07
TMEM260-205ENST00000554981 METRNQ9UJH8 293 aa8.34□□□□□ -1.07
TMEM260-205ENST00000554981 TRPC5Q9UL62 973 aaPredicted RBP8.34□□□□□ -1.07
TMEM260-205ENST00000554981 HRCP23327 699 aa8.33□□□□□ -1.08
TMEM260-205ENST00000554981 SPHKAPQ2M3C7 1700 aa8.33□□□□□ -1.08
TMEM260-205ENST00000554981 MICALL2Q8IY33 904 aa8.33□□□□□ -1.08
TMEM260-205ENST00000554981 LRRC59Q96AG4 307 aaKnown RBP8.33□□□□□ -1.08
TMEM260-205ENST00000554981 ATRNO75882 1429 aa8.32□□□□□ -1.08
TMEM260-205ENST00000554981 BLMP54132 1417 aaPredicted RBP8.32□□□□□ -1.08
TMEM260-205ENST00000554981 NAIPQ13075 1403 aa8.32□□□□□ -1.08
TMEM260-205ENST00000554981 RIMS2Q9UQ26 1411 aa8.32□□□□□ -1.08
TMEM260-205ENST00000554981 DDX27Q96GQ7 796 aaKnown RBP8.32□□□□□ -1.08
TMEM260-205ENST00000554981 ZFYVE9O95405 1425 aa8.31□□□□□ -1.08
TMEM260-205ENST00000554981 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
TMEM260-205ENST00000554981 E2F4Q16254 413 aa8.31□□□□□ -1.08
TMEM260-205ENST00000554981 TMC2Q8TDI7 906 aa8.31□□□□□ -1.08
TMEM260-205ENST00000554981 COLQQ9Y215 455 aaPredicted RBP8.31□□□□□ -1.08
TMEM260-205ENST00000554981 NCOA3Q9Y6Q9 1424 aa8.3□□□□□ -1.08
TMEM260-205ENST00000554981 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
TMEM260-205ENST00000554981 SLC52A1Q9NWF4 448 aa8.3□□□□□ -1.08
TMEM260-205ENST00000554981 BCL9LQ86UU0 1499 aa8.3□□□□□ -1.08
TMEM260-205ENST00000554981 MST1RQ04912 1400 aa8.29□□□□□ -1.08
TMEM260-205ENST00000554981 CRISPLD2Q9H0B8 497 aa8.29□□□□□ -1.08
TMEM260-205ENST00000554981 PLEKHG1Q9ULL1 1385 aa8.29□□□□□ -1.08
TMEM260-205ENST00000554981 POTEFA5A3E0 1075 aa8.28□□□□□ -1.08
TMEM260-205ENST00000554981 FNBP4Q8N3X1 1017 aaPredicted RBP8.28□□□□□ -1.08
TMEM260-205ENST00000554981 GPHNQ9NQX3 736 aaPredicted RBP8.28□□□□□ -1.08
TMEM260-205ENST00000554981 BRWD3Q6RI45 1802 aa8.28□□□□□ -1.08
TMEM260-205ENST00000554981 HFM1A2PYH4 1435 aa8.28□□□□□ -1.08
TMEM260-205ENST00000554981 SENP3-EIF4A1A0A087X0R7 540 aa8.27□□□□□ -1.09
TMEM260-205ENST00000554981 SF3B2Q13435 895 aaKnown RBP8.27□□□□□ -1.09
TMEM260-205ENST00000554981 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
TMEM260-205ENST00000554981 TBX22Q9Y458 520 aa8.27□□□□□ -1.09
TMEM260-205ENST00000554981 ADAMTS13Q76LX8 1427 aa8.27□□□□□ -1.09
TMEM260-205ENST00000554981 PTPRUQ92729 1446 aa8.27□□□□□ -1.09
TMEM260-205ENST00000554981 TRPM2O94759 1503 aa8.26□□□□□ -1.09
TMEM260-205ENST00000554981 POTEJP0CG39 1038 aa8.26□□□□□ -1.09
TMEM260-205ENST00000554981 MFSD10Q14728 455 aa8.26□□□□□ -1.09
TMEM260-205ENST00000554981 R3HDM1Q15032 1099 aaKnown RBP8.26□□□□□ -1.09
TMEM260-205ENST00000554981 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
TMEM260-205ENST00000554981 OTUD5Q96G74 571 aa8.26□□□□□ -1.09
TMEM260-205ENST00000554981 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-205ENST00000554981 TMEM121BQ9BXQ6 578 aaPredicted RBP8.26□□□□□ -1.09
TMEM260-205ENST00000554981 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
TMEM260-205ENST00000554981 KIF1BO60333 1816 aa8.26□□□□□ -1.09
TMEM260-205ENST00000554981 PPP1R15BQ5SWA1 713 aa8.25□□□□□ -1.09
TMEM260-205ENST00000554981 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
TMEM260-205ENST00000554981 GLI3P10071 1580 aa8.25□□□□□ -1.09
TMEM260-205ENST00000554981 NRXN3Q9Y4C0 1643 aa8.25□□□□□ -1.09
TMEM260-205ENST00000554981 UTRNP46939 3433 aa8.24□□□□□ -1.09
TMEM260-205ENST00000554981 DCCP43146 1447 aa8.24□□□□□ -1.09
TMEM260-205ENST00000554981 PTCH1Q13635 1447 aa8.24□□□□□ -1.09
TMEM260-205ENST00000554981 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.24□□□□□ -1.09
TMEM260-205ENST00000554981 ARHGEF1Q92888 912 aaKnown RBP8.24□□□□□ -1.09
TMEM260-205ENST00000554981 RALGAPBQ86X10 1494 aa8.24□□□□□ -1.09
TMEM260-205ENST00000554981 NEXMIFQ5QGS0 1516 aa8.24□□□□□ -1.09
TMEM260-205ENST00000554981 CEP350Q5VT06 3117 aa8.22□□□□□ -1.09
TMEM260-205ENST00000554981 C2orf72A6NCS6 295 aa8.22□□□□□ -1.09
TMEM260-205ENST00000554981 HDGFP51858 240 aaKnown RBP8.22□□□□□ -1.09
TMEM260-205ENST00000554981 DSG2Q14126 1118 aa8.22□□□□□ -1.09
TMEM260-205ENST00000554981 XRN1Q8IZH2 1706 aaKnown RBP8.21□□□□□ -1.09
TMEM260-205ENST00000554981 MARF1Q9Y4F3 1742 aaKnown RBP8.21□□□□□ -1.09
TMEM260-205ENST00000554981 TULP1O00294 542 aaPredicted RBP8.21□□□□□ -1.1
TMEM260-205ENST00000554981 BAG6P46379 1132 aa8.21□□□□□ -1.1
TMEM260-205ENST00000554981 FOXK1P85037 733 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms