RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
FCF1-207ENST00000554973 HOXA2O43364 376 aa9.3□□□□□ -0.92
FCF1-207ENST00000554973 LRRN4Q8WUT4 740 aa9.3□□□□□ -0.92
FCF1-207ENST00000554973 BCAMP50895 628 aa9.29□□□□□ -0.92
FCF1-207ENST00000554973 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
FCF1-207ENST00000554973 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
FCF1-207ENST00000554973 TMEM164Q5U3C3 297 aa9.29□□□□□ -0.92
FCF1-207ENST00000554973 PHLDB3Q6NSJ2 640 aa9.29□□□□□ -0.92
FCF1-207ENST00000554973 RDH13Q8NBN7 331 aa9.29□□□□□ -0.92
FCF1-207ENST00000554973 PCDHGC3Q9UN70 934 aa9.29□□□□□ -0.92
FCF1-207ENST00000554973 ZNF16P17020 682 aaPredicted RBP9.28□□□□□ -0.92
FCF1-207ENST00000554973 EIF4G2P78344 907 aaKnown RBP eCLIP9.28□□□□□ -0.92
FCF1-207ENST00000554973 MTMR2Q13614 643 aa9.28□□□□□ -0.92
FCF1-207ENST00000554973 NYAP1Q6ZVC0 841 aa9.28□□□□□ -0.92
FCF1-207ENST00000554973 FAM177A1Q8N128 213 aaPredicted RBP9.28□□□□□ -0.92
FCF1-207ENST00000554973 GCGRP47871 477 aa9.27□□□□□ -0.93
FCF1-207ENST00000554973 NUDT18Q6ZVK8 323 aa9.27□□□□□ -0.93
FCF1-207ENST00000554973 EPS8L1Q8TE68 723 aa9.27□□□□□ -0.93
FCF1-207ENST00000554973 ZMIZ1Q9ULJ6 1067 aa9.27□□□□□ -0.93
FCF1-207ENST00000554973 SSFA2P28290 1259 aa9.26□□□□□ -0.93
FCF1-207ENST00000554973 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
FCF1-207ENST00000554973 LRCH3Q96II8 777 aa9.26□□□□□ -0.93
FCF1-207ENST00000554973 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.26□□□□□ -0.93
FCF1-207ENST00000554973 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
FCF1-207ENST00000554973 STK32AQ8WU08 396 aa9.25□□□□□ -0.93
FCF1-207ENST00000554973 BCL2L13Q9BXK5 485 aa9.25□□□□□ -0.93
FCF1-207ENST00000554973 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
FCF1-207ENST00000554973 NOVA2Q9UNW9 492 aaKnown RBP9.25□□□□□ -0.93
FCF1-207ENST00000554973 SOWAHDA6NJG2 315 aa9.24□□□□□ -0.93
FCF1-207ENST00000554973 NBPF26B4DH59 902 aa9.24□□□□□ -0.93
FCF1-207ENST00000554973 TSC1Q92574 1164 aa9.24□□□□□ -0.93
FCF1-207ENST00000554973 TATDN2Q93075 761 aa9.24□□□□□ -0.93
FCF1-207ENST00000554973 RGS20O76081 388 aa9.23□□□□□ -0.93
FCF1-207ENST00000554973 TCF3P15923 654 aa9.23□□□□□ -0.93
FCF1-207ENST00000554973 TSR3Q9UJK0 312 aaKnown RBP9.23□□□□□ -0.93
FCF1-207ENST00000554973 A0A0G2JS52 829 aa9.22□□□□□ -0.93
FCF1-207ENST00000554973 CFAP99D6REC4 459 aa9.22□□□□□ -0.93
FCF1-207ENST00000554973 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
FCF1-207ENST00000554973 CCDC125Q86Z20 511 aa9.22□□□□□ -0.93
FCF1-207ENST00000554973 WBP1LQ9NX94 342 aa9.22□□□□□ -0.93
FCF1-207ENST00000554973 PNMA3Q9UL41 463 aa9.22□□□□□ -0.93
FCF1-207ENST00000554973 HPS5Q9UPZ3 1129 aa9.22□□□□□ -0.93
FCF1-207ENST00000554973 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
FCF1-207ENST00000554973 MARSP56192 900 aaKnown RBP9.21□□□□□ -0.94
FCF1-207ENST00000554973 NR6A1Q15406 480 aa9.21□□□□□ -0.94
FCF1-207ENST00000554973 DRC1Q96MC2 740 aa9.21□□□□□ -0.94
FCF1-207ENST00000554973 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
FCF1-207ENST00000554973 FAM196BA6NMK8 535 aa9.2□□□□□ -0.94
FCF1-207ENST00000554973 ITGBL1O95965 494 aaPredicted RBP9.2□□□□□ -0.94
FCF1-207ENST00000554973 CANXP27824 592 aaKnown RBP9.2□□□□□ -0.94
FCF1-207ENST00000554973 GUCA2AQ02747 115 aa9.2□□□□□ -0.94
FCF1-207ENST00000554973 NR1H3Q13133 447 aa9.2□□□□□ -0.94
FCF1-207ENST00000554973 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
FCF1-207ENST00000554973 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
FCF1-207ENST00000554973 VAMP1P23763 118 aa9.19□□□□□ -0.94
FCF1-207ENST00000554973 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
FCF1-207ENST00000554973 CLP1Q92989 425 aaKnown RBP9.19□□□□□ -0.94
FCF1-207ENST00000554973 USP17L3A6NCW0 530 aa9.18□□□□□ -0.94
FCF1-207ENST00000554973 USP17L4A6NCW7 530 aa9.18□□□□□ -0.94
FCF1-207ENST00000554973 SMAPO00193 183 aa9.18□□□□□ -0.94
FCF1-207ENST00000554973 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
FCF1-207ENST00000554973 PPP4CP60510 307 aa9.18□□□□□ -0.94
FCF1-207ENST00000554973 USP17L2Q6R6M4 530 aa9.18□□□□□ -0.94
FCF1-207ENST00000554973 USP17L1Q7RTZ2 530 aa9.18□□□□□ -0.94
FCF1-207ENST00000554973 C6orf229H3BNL8 230 aa9.17□□□□□ -0.94
FCF1-207ENST00000554973 KCNC4Q03721 635 aa9.17□□□□□ -0.94
FCF1-207ENST00000554973 GRIPAP1Q4V328 841 aa9.17□□□□□ -0.94
FCF1-207ENST00000554973 HLA-CQ95604 372 aa9.17□□□□□ -0.94
FCF1-207ENST00000554973 CDCA7Q9BWT1 371 aaPredicted RBP9.17□□□□□ -0.94
FCF1-207ENST00000554973 SLAIN2Q9P270 581 aa9.17□□□□□ -0.94
FCF1-207ENST00000554973 PIK3CDO00329 1044 aa9.16□□□□□ -0.94
FCF1-207ENST00000554973 SKIP12755 728 aa9.16□□□□□ -0.94
FCF1-207ENST00000554973 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
FCF1-207ENST00000554973 SAMD7Q7Z3H4 446 aa9.16□□□□□ -0.94
FCF1-207ENST00000554973 FAM200AQ8TCP9 573 aa9.16□□□□□ -0.94
FCF1-207ENST00000554973 SREK1Q8WXA9 508 aaKnown RBP9.16□□□□□ -0.94
FCF1-207ENST00000554973 ANKRD33BA6NCL7 494 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L5A8MUK1 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L21D6R901 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 USP17L24Q0WX57 530 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 LARP1Q6PKG0 1096 aaKnown RBP9.15□□□□□ -0.94
FCF1-207ENST00000554973 NPAS4Q8IUM7 802 aa9.15□□□□□ -0.94
FCF1-207ENST00000554973 SLC10A3P09131 477 aa9.14□□□□□ -0.95
FCF1-207ENST00000554973 SERPINB4P48594 390 aa9.14□□□□□ -0.95
FCF1-207ENST00000554973 PTK7Q13308 1070 aa9.14□□□□□ -0.95
FCF1-207ENST00000554973 CRTC2Q53ET0 693 aaPredicted RBP9.14□□□□□ -0.95
FCF1-207ENST00000554973 BIN2Q9UBW5 565 aaPredicted RBP9.14□□□□□ -0.95
FCF1-207ENST00000554973 MKRN1Q9UHC7 482 aaKnown RBP9.14□□□□□ -0.95
FCF1-207ENST00000554973 ATP2B4P23634 1241 aa9.13□□□□□ -0.95
FCF1-207ENST00000554973 ZBBXA8MT70 800 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms