RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
CCDC85C-202ENST00000554877 SLIT2O94813 1529 aa17.59■□□□□ 0.41
CCDC85C-202ENST00000554877 CHRNA2Q15822 529 aa17.59■□□□□ 0.41
CCDC85C-202ENST00000554877 VPS72Q15906 364 aa17.59■□□□□ 0.41
CCDC85C-202ENST00000554877 ABTB2Q8N961 1025 aa17.59■□□□□ 0.41
CCDC85C-202ENST00000554877 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.41
CCDC85C-202ENST00000554877 ROCK2O75116 1388 aaKnown RBP17.58■□□□□ 0.4
CCDC85C-202ENST00000554877 ZBTB7CA1YPR0 619 aa17.58■□□□□ 0.4
CCDC85C-202ENST00000554877 CABP1Q9NZU7 370 aa17.58■□□□□ 0.4
CCDC85C-202ENST00000554877 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.4
CCDC85C-202ENST00000554877 ATP7BP35670 1465 aa17.57■□□□□ 0.4
CCDC85C-202ENST00000554877 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
CCDC85C-202ENST00000554877 PCGF6Q9BYE7 350 aa17.57■□□□□ 0.4
CCDC85C-202ENST00000554877 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
CCDC85C-202ENST00000554877 FAM98CQ17RN3 349 aaKnown RBP17.56■□□□□ 0.4
CCDC85C-202ENST00000554877 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
CCDC85C-202ENST00000554877 EVC2Q86UK5 1308 aa17.54■□□□□ 0.4
CCDC85C-202ENST00000554877 EVA1CP58658 441 aa17.54■□□□□ 0.4
CCDC85C-202ENST00000554877 CARD11Q9BXL7 1154 aa17.53■□□□□ 0.4
CCDC85C-202ENST00000554877 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
CCDC85C-202ENST00000554877 TRPM3Q9HCF6 1732 aaPredicted RBP17.52■□□□□ 0.4
CCDC85C-202ENST00000554877 USP35Q9P2H5 1018 aa17.52■□□□□ 0.4
CCDC85C-202ENST00000554877 KIAA0232Q92628 1395 aa17.52■□□□□ 0.39
CCDC85C-202ENST00000554877 KRT27Q7Z3Y8 459 aa17.51■□□□□ 0.39
CCDC85C-202ENST00000554877 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
CCDC85C-202ENST00000554877 POLR3AO14802 1390 aaPredicted RBP17.51■□□□□ 0.39
CCDC85C-202ENST00000554877 GLI3P10071 1580 aa17.5■□□□□ 0.39
CCDC85C-202ENST00000554877 NLRP6P59044 892 aa17.5■□□□□ 0.39
CCDC85C-202ENST00000554877 SF3B2Q13435 895 aaKnown RBP17.5■□□□□ 0.39
CCDC85C-202ENST00000554877 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
CCDC85C-202ENST00000554877 ITSN1Q15811 1721 aa17.49■□□□□ 0.39
CCDC85C-202ENST00000554877 ALS2Q96Q42 1657 aa17.48■□□□□ 0.39
CCDC85C-202ENST00000554877 SOX12O15370 315 aa17.48■□□□□ 0.39
CCDC85C-202ENST00000554877 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
CCDC85C-202ENST00000554877 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 GCP02774 474 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 CCDC125Q86Z20 511 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
CCDC85C-202ENST00000554877 QRICH2Q9H0J4 1663 aa17.46■□□□□ 0.39
CCDC85C-202ENST00000554877 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.46■□□□□ 0.39
CCDC85C-202ENST00000554877 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
CCDC85C-202ENST00000554877 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
CCDC85C-202ENST00000554877 TOPAZ1Q8N9V7 1692 aa17.43■□□□□ 0.38
CCDC85C-202ENST00000554877 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
CCDC85C-202ENST00000554877 NWD2Q9ULI1 1742 aa17.43■□□□□ 0.38
CCDC85C-202ENST00000554877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC85C-202ENST00000554877 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
CCDC85C-202ENST00000554877 SPATA31A1Q5TZJ5 1347 aa17.42■□□□□ 0.38
CCDC85C-202ENST00000554877 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
CCDC85C-202ENST00000554877 USP6P35125 1406 aa17.4■□□□□ 0.38
CCDC85C-202ENST00000554877 USP19O94966 1318 aa17.4■□□□□ 0.38
CCDC85C-202ENST00000554877 TTC21BQ7Z4L5 1316 aa17.4■□□□□ 0.38
CCDC85C-202ENST00000554877 BLMP54132 1417 aaPredicted RBP17.39■□□□□ 0.38
CCDC85C-202ENST00000554877 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
CCDC85C-202ENST00000554877 PDE3BQ13370 1112 aa17.38■□□□□ 0.37
CCDC85C-202ENST00000554877 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
CCDC85C-202ENST00000554877 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
CCDC85C-202ENST00000554877 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
CCDC85C-202ENST00000554877 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 CSB-PGBD3P0DP91 1061 aa17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 BAG6P46379 1132 aa17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 TOM1L2Q6ZVM7 507 aa17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 BRD4O60885 1362 aaPredicted RBP17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
CCDC85C-202ENST00000554877 CRYBG1Q9Y4K1 1723 aa17.35■□□□□ 0.37
CCDC85C-202ENST00000554877 TRIM37O94972 964 aa17.35■□□□□ 0.37
CCDC85C-202ENST00000554877 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
CCDC85C-202ENST00000554877 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
CCDC85C-202ENST00000554877 CPDO75976 1380 aa17.34■□□□□ 0.37
CCDC85C-202ENST00000554877 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
CCDC85C-202ENST00000554877 NME9Q86XW9 330 aa17.33■□□□□ 0.36
CCDC85C-202ENST00000554877 KCNH5Q8NCM2 988 aa17.33■□□□□ 0.36
CCDC85C-202ENST00000554877 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.36
CCDC85C-202ENST00000554877 SBNO2Q9Y2G9 1366 aa17.32■□□□□ 0.36
CCDC85C-202ENST00000554877 TTC21AQ8NDW8 1320 aa17.32■□□□□ 0.36
CCDC85C-202ENST00000554877 FAM196AQ6ZSG2 479 aa17.32■□□□□ 0.36
CCDC85C-202ENST00000554877 BARGINQ6ZT62 677 aa17.32■□□□□ 0.36
CCDC85C-202ENST00000554877 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
CCDC85C-202ENST00000554877 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
CCDC85C-202ENST00000554877 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
CCDC85C-202ENST00000554877 APBA3O96018 575 aa17.3■□□□□ 0.36
CCDC85C-202ENST00000554877 ARHGEF25Q86VW2 580 aa17.3■□□□□ 0.36
CCDC85C-202ENST00000554877 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
CCDC85C-202ENST00000554877 THRAP3Q9Y2W1 955 aaKnown RBP17.29■□□□□ 0.36
CCDC85C-202ENST00000554877 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
CCDC85C-202ENST00000554877 EZH2Q15910 746 aaKnown RBP17.28■□□□□ 0.36
CCDC85C-202ENST00000554877 EP400Q96L91 3159 aa17.27■□□□□ 0.36
CCDC85C-202ENST00000554877 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
CCDC85C-202ENST00000554877 TESK2Q96S53 571 aa17.26■□□□□ 0.35
CCDC85C-202ENST00000554877 CRB1P82279 1406 aa17.26■□□□□ 0.35
CCDC85C-202ENST00000554877 DDB1Q16531 1140 aa17.25■□□□□ 0.35
CCDC85C-202ENST00000554877 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
CCDC85C-202ENST00000554877 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms