RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 RIMS1Q86UR5 1692 aaKnown RBP8.1□□□□□ -1.11
ATXN3-229ENST00000554672 PTPRTO14522 1441 aa8.1□□□□□ -1.11
ATXN3-229ENST00000554672 ZFYVE16Q7Z3T8 1539 aa8.09□□□□□ -1.11
ATXN3-229ENST00000554672 RNF223E7ERA6 249 aa8.09□□□□□ -1.11
ATXN3-229ENST00000554672 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
ATXN3-229ENST00000554672 PLCH2O75038 1416 aa8.09□□□□□ -1.11
ATXN3-229ENST00000554672 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
ATXN3-229ENST00000554672 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
ATXN3-229ENST00000554672 LCE2BO14633 110 aa8.08□□□□□ -1.12
ATXN3-229ENST00000554672 PUS10Q3MIT2 529 aaKnown RBP8.08□□□□□ -1.12
ATXN3-229ENST00000554672 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
ATXN3-229ENST00000554672 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
ATXN3-229ENST00000554672 CTTNBP2Q8WZ74 1663 aa8.08□□□□□ -1.12
ATXN3-229ENST00000554672 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
ATXN3-229ENST00000554672 SCUBE3Q8IX30 993 aa8.07□□□□□ -1.12
ATXN3-229ENST00000554672 CDK11AQ9UQ88 783 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-229ENST00000554672 ARHGEF12Q9NZN5 1544 aa8.07□□□□□ -1.12
ATXN3-229ENST00000554672 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
ATXN3-229ENST00000554672 PPEF1O14829 653 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-229ENST00000554672 GFRA3O60609 400 aa8.06□□□□□ -1.12
ATXN3-229ENST00000554672 GGCXP38435 758 aa8.06□□□□□ -1.12
ATXN3-229ENST00000554672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-229ENST00000554672 DDX11L8A8MPP1 907 aa8.05□□□□□ -1.12
ATXN3-229ENST00000554672 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
ATXN3-229ENST00000554672 NR1I2O75469 434 aa8.05□□□□□ -1.12
ATXN3-229ENST00000554672 S1PR4O95977 384 aa8.05□□□□□ -1.12
ATXN3-229ENST00000554672 Q6ZNB5 142 aa8.05□□□□□ -1.12
ATXN3-229ENST00000554672 ATP1B4Q9UN42 357 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-229ENST00000554672 TTC37Q6PGP7 1564 aa8.05□□□□□ -1.12
ATXN3-229ENST00000554672 TRAPPC8Q9Y2L5 1435 aa8.04□□□□□ -1.12
ATXN3-229ENST00000554672 HECW1Q76N89 1606 aa8.04□□□□□ -1.12
ATXN3-229ENST00000554672 ADH1BP00325 375 aa8.04□□□□□ -1.12
ATXN3-229ENST00000554672 RSPH4AQ5TD94 716 aa8.04□□□□□ -1.12
ATXN3-229ENST00000554672 RDH13Q8NBN7 331 aa8.04□□□□□ -1.12
ATXN3-229ENST00000554672 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
ATXN3-229ENST00000554672 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
ATXN3-229ENST00000554672 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
ATXN3-229ENST00000554672 CFAP74Q9C0B2 1584 aa8.03□□□□□ -1.12
ATXN3-229ENST00000554672 GCGRP47871 477 aa8.03□□□□□ -1.12
ATXN3-229ENST00000554672 MORN1Q5T089 497 aa8.03□□□□□ -1.12
ATXN3-229ENST00000554672 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
ATXN3-229ENST00000554672 IRF6O14896 467 aa8.02□□□□□ -1.13
ATXN3-229ENST00000554672 FUT2Q10981 343 aa8.02□□□□□ -1.13
ATXN3-229ENST00000554672 MAP2K5Q13163 448 aa8.02□□□□□ -1.13
ATXN3-229ENST00000554672 LAPTM4AQ15012 233 aa8.02□□□□□ -1.13
ATXN3-229ENST00000554672 LIAT1Q6ZQX7 453 aa8.02□□□□□ -1.13
ATXN3-229ENST00000554672 ANKLE1Q8NAG6 615 aa8.02□□□□□ -1.13
ATXN3-229ENST00000554672 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
ATXN3-229ENST00000554672 SLC19A1P41440 591 aa8.01□□□□□ -1.13
ATXN3-229ENST00000554672 PLA2G2CQ5R387 149 aa8.01□□□□□ -1.13
ATXN3-229ENST00000554672 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
ATXN3-229ENST00000554672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATXN3-229ENST00000554672 THAP11Q96EK4 314 aa8.01□□□□□ -1.13
ATXN3-229ENST00000554672 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
ATXN3-229ENST00000554672 NRG2O14511 850 aaPredicted RBP8□□□□□ -1.13
ATXN3-229ENST00000554672 ATP6V1AP38606 617 aa8□□□□□ -1.13
ATXN3-229ENST00000554672 SPSB2Q99619 263 aa8□□□□□ -1.13
ATXN3-229ENST00000554672 SLC6A16Q9GZN6 736 aa8□□□□□ -1.13
ATXN3-229ENST00000554672 SLC27A5Q9Y2P5 690 aa8□□□□□ -1.13
ATXN3-229ENST00000554672 NCOA1Q15788 1441 aa8□□□□□ -1.13
ATXN3-229ENST00000554672 ZNF335Q9H4Z2 1342 aaPredicted RBP8□□□□□ -1.13
ATXN3-229ENST00000554672 PREX1Q8TCU6 1659 aa7.99□□□□□ -1.13
ATXN3-229ENST00000554672 SULF1Q8IWU6 871 aa7.99□□□□□ -1.13
ATXN3-229ENST00000554672 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
ATXN3-229ENST00000554672 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
ATXN3-229ENST00000554672 PDZRN3Q9UPQ7 1066 aa7.99□□□□□ -1.13
ATXN3-229ENST00000554672 FER1L4A9Z1Z3 1794 aa7.99□□□□□ -1.13
ATXN3-229ENST00000554672 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
ATXN3-229ENST00000554672 MINK1Q8N4C8 1332 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-229ENST00000554672 SETD1BQ9UPS6 1966 aaKnown RBP7.99□□□□□ -1.13
ATXN3-229ENST00000554672 ZMYM3Q14202 1370 aa7.98□□□□□ -1.13
ATXN3-229ENST00000554672 SPRYD7Q5W111 196 aa7.98□□□□□ -1.13
ATXN3-229ENST00000554672 FAM160A2Q8N612 972 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-229ENST00000554672 MLH3Q9UHC1 1453 aa7.98□□□□□ -1.13
ATXN3-229ENST00000554672 EEA1Q15075 1411 aa7.97□□□□□ -1.13
ATXN3-229ENST00000554672 TOM1O60784 492 aa7.97□□□□□ -1.13
ATXN3-229ENST00000554672 CD46P15529 392 aa7.97□□□□□ -1.13
ATXN3-229ENST00000554672 HSPA1LP34931 641 aa7.97□□□□□ -1.13
ATXN3-229ENST00000554672 TRAF7Q6Q0C0 670 aa7.97□□□□□ -1.13
ATXN3-229ENST00000554672 NPATQ14207 1427 aa7.96□□□□□ -1.13
ATXN3-229ENST00000554672 TULP1O00294 542 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-229ENST00000554672 UBTFP17480 764 aaKnown RBP7.96□□□□□ -1.14
ATXN3-229ENST00000554672 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-229ENST00000554672 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
ATXN3-229ENST00000554672 ZNF598Q86UK7 904 aaKnown RBP7.96□□□□□ -1.14
ATXN3-229ENST00000554672 CCDC102AQ96A19 550 aa7.96□□□□□ -1.14
ATXN3-229ENST00000554672 AGLP35573 1532 aa7.96□□□□□ -1.14
ATXN3-229ENST00000554672 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
ATXN3-229ENST00000554672 TROQ12816 1431 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-229ENST00000554672 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
ATXN3-229ENST00000554672 PIP4K2BP78356 416 aa7.95□□□□□ -1.14
ATXN3-229ENST00000554672 CLIP1P30622 1438 aa7.95□□□□□ -1.14
ATXN3-229ENST00000554672 ARHGAP5Q13017 1502 aa7.94□□□□□ -1.14
ATXN3-229ENST00000554672 REREQ9P2R6 1566 aa7.94□□□□□ -1.14
ATXN3-229ENST00000554672 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-229ENST00000554672 KDM5CP41229 1560 aa7.93□□□□□ -1.14
ATXN3-229ENST00000554672 FMNL1O95466 1100 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-229ENST00000554672 RNF19BQ6ZMZ0 732 aa7.93□□□□□ -1.14
ATXN3-229ENST00000554672 PRDM9Q9NQV7 894 aa7.93□□□□□ -1.14
ATXN3-229ENST00000554672 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms