RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 PYCARDQ9ULZ3 195 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 ADAMTS8Q9UP79 889 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 E2F4Q16254 413 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 KRBA2Q6ZNG9 492 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 CREBRFQ8IUR6 639 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
NUMB-212ENST00000554546 MAP2K1Q02750 393 aaPredicted RBP13.68□□□□□ -0.22
NUMB-212ENST00000554546 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 ZNF526Q8TF50 670 aaPredicted RBP13.68□□□□□ -0.22
NUMB-212ENST00000554546 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
NUMB-212ENST00000554546 CXorf56Q9H5V9 222 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 SUFUQ9UMX1 484 aa13.68□□□□□ -0.22
NUMB-212ENST00000554546 REC8O95072 547 aa13.67□□□□□ -0.22
NUMB-212ENST00000554546 ADCY5O95622 1261 aa13.67□□□□□ -0.22
NUMB-212ENST00000554546 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
NUMB-212ENST00000554546 KIAA1524Q8TCG1 905 aa13.67□□□□□ -0.22
NUMB-212ENST00000554546 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
NUMB-212ENST00000554546 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.67□□□□□ -0.22
NUMB-212ENST00000554546 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
NUMB-212ENST00000554546 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
NUMB-212ENST00000554546 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
NUMB-212ENST00000554546 BLMP54132 1417 aaPredicted RBP13.66□□□□□ -0.22
NUMB-212ENST00000554546 SYCP1Q15431 976 aa13.66□□□□□ -0.22
NUMB-212ENST00000554546 ZMYM4Q5VZL5 1548 aa13.66□□□□□ -0.22
NUMB-212ENST00000554546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.66□□□□□ -0.223e-9■■■□□ 17.6
NUMB-212ENST00000554546 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
NUMB-212ENST00000554546 PKP1Q13835 747 aa13.66□□□□□ -0.22
NUMB-212ENST00000554546 GOLGA6L1Q8N7Z2 621 aa13.66□□□□□ -0.22
NUMB-212ENST00000554546 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
NUMB-212ENST00000554546 DEF6Q9H4E7 631 aa13.65□□□□□ -0.22
NUMB-212ENST00000554546 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.65□□□□□ -0.22
NUMB-212ENST00000554546 V9GYY5 206 aaPredicted RBP13.65□□□□□ -0.22
NUMB-212ENST00000554546 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.22
NUMB-212ENST00000554546 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
NUMB-212ENST00000554546 RGL3Q3MIN7 710 aa13.65□□□□□ -0.22
NUMB-212ENST00000554546 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
NUMB-212ENST00000554546 ZNF397Q8NF99 534 aaPredicted RBP13.65□□□□□ -0.22
NUMB-212ENST00000554546 PDE3AQ14432 1141 aa13.65□□□□□ -0.22
NUMB-212ENST00000554546 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
NUMB-212ENST00000554546 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
NUMB-212ENST00000554546 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
NUMB-212ENST00000554546 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
NUMB-212ENST00000554546 NUCB2P80303 420 aa13.64□□□□□ -0.23
NUMB-212ENST00000554546 C16orf45Q96MC5 204 aaPredicted RBP13.64□□□□□ -0.23
NUMB-212ENST00000554546 ZMYM3Q14202 1370 aa13.64□□□□□ -0.23
NUMB-212ENST00000554546 DENND4BO75064 1496 aaPredicted RBP13.64□□□□□ -0.23
NUMB-212ENST00000554546 CCDC112Q8NEF3 446 aa13.63□□□□□ -0.23
NUMB-212ENST00000554546 FOXD4L5Q5VV16 416 aaPredicted RBP13.63□□□□□ -0.23
NUMB-212ENST00000554546 FOXD4L4Q8WXT5 416 aaPredicted RBP13.63□□□□□ -0.23
NUMB-212ENST00000554546 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
NUMB-212ENST00000554546 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
NUMB-212ENST00000554546 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
NUMB-212ENST00000554546 A0A1B0GUL7 405 aa13.62□□□□□ -0.23
NUMB-212ENST00000554546 POLR3GO15318 223 aaPredicted RBP13.62□□□□□ -0.23
NUMB-212ENST00000554546 ZNF853P0CG23 659 aa13.62□□□□□ -0.23
NUMB-212ENST00000554546 TTC31Q49AM3 519 aaPredicted RBP13.62□□□□□ -0.23
NUMB-212ENST00000554546 MUM1L1Q5H9M0 696 aa13.62□□□□□ -0.23
NUMB-212ENST00000554546 CCDC91Q7Z6B0 441 aa13.62□□□□□ -0.23
NUMB-212ENST00000554546 FGD6Q6ZV73 1430 aa13.61□□□□□ -0.23
NUMB-212ENST00000554546 ATP2B1P20020 1258 aa13.61□□□□□ -0.23
NUMB-212ENST00000554546 TXLNBQ8N3L3 684 aa13.61□□□□□ -0.23
NUMB-212ENST00000554546 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
NUMB-212ENST00000554546 SPC24Q8NBT2 197 aa13.61□□□□□ -0.23
NUMB-212ENST00000554546 FAM53CQ9NYF3 392 aa13.61□□□□□ -0.23
NUMB-212ENST00000554546 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
NUMB-212ENST00000554546 NPHP1O15259 732 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 TSGA10IPQ3SY00 556 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 FBXO38Q6PIJ6 1188 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 KIF2CQ99661 725 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 KCNF1Q9H3M0 494 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 TEX35Q5T0J7 233 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 KIF21AQ7Z4S6 1674 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 ZSCAN26Q16670 478 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
NUMB-212ENST00000554546 KIF1CO43896 1103 aaKnown RBP13.59□□□□□ -0.23
NUMB-212ENST00000554546 PACS2Q86VP3 889 aa13.59□□□□□ -0.23
NUMB-212ENST00000554546 CALR3Q96L12 384 aaKnown RBP13.59□□□□□ -0.23
NUMB-212ENST00000554546 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
NUMB-212ENST00000554546 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.59□□□□□ -0.23
NUMB-212ENST00000554546 PPP2R5AQ15172 486 aa13.59□□□□□ -0.23
NUMB-212ENST00000554546 MNS1Q8NEH6 495 aa13.59□□□□□ -0.23
NUMB-212ENST00000554546 RAI14Q9P0K7 980 aa13.59□□□□□ -0.23
NUMB-212ENST00000554546 RRP15Q9Y3B9 282 aaKnown RBP13.59□□□□□ -0.23
NUMB-212ENST00000554546 CCDC144AA2RUR9 1427 aa13.59□□□□□ -0.23
NUMB-212ENST00000554546 ST20-MTHFSA0A0A6YYL1 179 aa13.58□□□□□ -0.23
NUMB-212ENST00000554546 CCDC189A1A4V9 331 aa13.58□□□□□ -0.23
NUMB-212ENST00000554546 BMS1Q14692 1282 aaKnown RBP13.58□□□□□ -0.23
NUMB-212ENST00000554546 MED4Q9NPJ6 270 aa13.58□□□□□ -0.23
NUMB-212ENST00000554546 ATG3Q9NT62 314 aa13.58□□□□□ -0.23
NUMB-212ENST00000554546 ARHGAP31Q2M1Z3 1444 aa13.58□□□□□ -0.24
NUMB-212ENST00000554546 SMARCA4P51532 1647 aa13.58□□□□□ -0.24
NUMB-212ENST00000554546 BIRC2Q13490 618 aa13.58□□□□□ -0.24
NUMB-212ENST00000554546 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
NUMB-212ENST00000554546 SRLQ86TD4 932 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms