RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 SRPK2P78362 688 aaKnown RBP15.95■□□□□ 0.14
ABCD4-221ENST00000554453 SEPT12Q8IYM1 358 aa15.95■□□□□ 0.14
ABCD4-221ENST00000554453 BTG4Q9NY30 223 aa15.95■□□□□ 0.14
ABCD4-221ENST00000554453 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
ABCD4-221ENST00000554453 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
ABCD4-221ENST00000554453 ALS2Q96Q42 1657 aa15.94■□□□□ 0.14
ABCD4-221ENST00000554453 NWD2Q9ULI1 1742 aa15.92■□□□□ 0.14
ABCD4-221ENST00000554453 ABTB2Q8N961 1025 aa15.92■□□□□ 0.14
ABCD4-221ENST00000554453 PRDM11Q9NQV5 511 aa15.92■□□□□ 0.14
ABCD4-221ENST00000554453 CABP1Q9NZU7 370 aa15.92■□□□□ 0.14
ABCD4-221ENST00000554453 GLI3P10071 1580 aa15.92■□□□□ 0.14
ABCD4-221ENST00000554453 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
ABCD4-221ENST00000554453 NUTM2GQ5VZR2 741 aa15.91■□□□□ 0.14
ABCD4-221ENST00000554453 EVC2Q86UK5 1308 aa15.91■□□□□ 0.14
ABCD4-221ENST00000554453 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
ABCD4-221ENST00000554453 NLRP13Q86W25 1043 aa15.9■□□□□ 0.14
ABCD4-221ENST00000554453 BRD4O60885 1362 aaPredicted RBP15.89■□□□□ 0.13
ABCD4-221ENST00000554453 ABCA3Q99758 1704 aa15.89■□□□□ 0.13
ABCD4-221ENST00000554453 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
ABCD4-221ENST00000554453 SPATA31A5Q5VU36 1347 aa15.89■□□□□ 0.13
ABCD4-221ENST00000554453 SPATA31A7Q8IWB4 1347 aa15.89■□□□□ 0.13
ABCD4-221ENST00000554453 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
ABCD4-221ENST00000554453 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
ABCD4-221ENST00000554453 KIAA0232Q92628 1395 aa15.87■□□□□ 0.13
ABCD4-221ENST00000554453 PPIP5K1Q6PFW1 1433 aa15.87■□□□□ 0.13
ABCD4-221ENST00000554453 PLCH1Q4KWH8 1693 aa15.87■□□□□ 0.13
ABCD4-221ENST00000554453 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
ABCD4-221ENST00000554453 FAM98CQ17RN3 349 aaKnown RBP15.87■□□□□ 0.13
ABCD4-221ENST00000554453 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
ABCD4-221ENST00000554453 COL14A1Q05707 1796 aaKnown RBP15.86■□□□□ 0.13
ABCD4-221ENST00000554453 GCP02774 474 aa15.86■□□□□ 0.13
ABCD4-221ENST00000554453 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
ABCD4-221ENST00000554453 USP19O94966 1318 aa15.85■□□□□ 0.13
ABCD4-221ENST00000554453 TOPAZ1Q8N9V7 1692 aa15.85■□□□□ 0.13
ABCD4-221ENST00000554453 TRPM1Q7Z4N2 1603 aa15.84■□□□□ 0.13
ABCD4-221ENST00000554453 EVA1CP58658 441 aa15.84■□□□□ 0.13
ABCD4-221ENST00000554453 CRYBG1Q9Y4K1 1723 aa15.83■□□□□ 0.13
ABCD4-221ENST00000554453 A0A0G2JS52 829 aa15.83■□□□□ 0.12
ABCD4-221ENST00000554453 NLRP6P59044 892 aa15.83■□□□□ 0.12
ABCD4-221ENST00000554453 MYT1Q01538 1121 aa15.83■□□□□ 0.12
ABCD4-221ENST00000554453 CARD11Q9BXL7 1154 aa15.83■□□□□ 0.12
ABCD4-221ENST00000554453 STRN4Q9NRL3 753 aa15.83■□□□□ 0.12
ABCD4-221ENST00000554453 SPATA31A1Q5TZJ5 1347 aa15.83■□□□□ 0.12
ABCD4-221ENST00000554453 CPDO75976 1380 aa15.83■□□□□ 0.12
ABCD4-221ENST00000554453 BLMP54132 1417 aaPredicted RBP15.83■□□□□ 0.12
ABCD4-221ENST00000554453 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
ABCD4-221ENST00000554453 ZRANB1Q9UGI0 708 aa15.82■□□□□ 0.12
ABCD4-221ENST00000554453 QRICH2Q9H0J4 1663 aa15.82■□□□□ 0.12
ABCD4-221ENST00000554453 USP6P35125 1406 aa15.81■□□□□ 0.12
ABCD4-221ENST00000554453 NRAPQ86VF7 1730 aa15.81■□□□□ 0.12
ABCD4-221ENST00000554453 SSH2Q76I76 1423 aa15.8■□□□□ 0.12
ABCD4-221ENST00000554453 TONSLQ96HA7 1378 aa15.8■□□□□ 0.12
ABCD4-221ENST00000554453 BARGINQ6ZT62 677 aa15.8■□□□□ 0.12
ABCD4-221ENST00000554453 DEFB132Q7Z7B7 95 aa15.8■□□□□ 0.12
ABCD4-221ENST00000554453 TTC21BQ7Z4L5 1316 aa15.79■□□□□ 0.12
ABCD4-221ENST00000554453 SBNO2Q9Y2G9 1366 aa15.78■□□□□ 0.12
ABCD4-221ENST00000554453 LARP1Q6PKG0 1096 aaKnown RBP15.78■□□□□ 0.12
ABCD4-221ENST00000554453 PUS7Q96PZ0 661 aaKnown RBP15.78■□□□□ 0.12
ABCD4-221ENST00000554453 CAMTA1Q9Y6Y1 1673 aa15.77■□□□□ 0.12
ABCD4-221ENST00000554453 TCP11L2Q8N4U5 519 aa15.77■□□□□ 0.12
ABCD4-221ENST00000554453 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
ABCD4-221ENST00000554453 PHRF1Q9P1Y6 1649 aaKnown RBP15.76■□□□□ 0.11
ABCD4-221ENST00000554453 TTC21AQ8NDW8 1320 aa15.76■□□□□ 0.11
ABCD4-221ENST00000554453 FAM182BQ5T319 152 aa15.76■□□□□ 0.11
ABCD4-221ENST00000554453 USP35Q9P2H5 1018 aa15.76■□□□□ 0.11
ABCD4-221ENST00000554453 EP400Q96L91 3159 aa15.76■□□□□ 0.11
ABCD4-221ENST00000554453 CPSF1Q10570 1443 aaKnown RBP15.76■□□□□ 0.11
ABCD4-221ENST00000554453 AATKQ6ZMQ8 1374 aa15.75■□□□□ 0.11
ABCD4-221ENST00000554453 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
ABCD4-221ENST00000554453 KCNH5Q8NCM2 988 aa15.75■□□□□ 0.11
ABCD4-221ENST00000554453 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
ABCD4-221ENST00000554453 BAG6P46379 1132 aa15.74■□□□□ 0.11
ABCD4-221ENST00000554453 ARHGEF25Q86VW2 580 aa15.74■□□□□ 0.11
ABCD4-221ENST00000554453 SLC12A5Q9H2X9 1139 aa15.74■□□□□ 0.11
ABCD4-221ENST00000554453 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
ABCD4-221ENST00000554453 KTN1Q86UP2 1357 aaKnown RBP15.73■□□□□ 0.11
ABCD4-221ENST00000554453 NRKQ7Z2Y5 1582 aa15.72■□□□□ 0.11
ABCD4-221ENST00000554453 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
ABCD4-221ENST00000554453 TMC1Q8TDI8 760 aa15.72■□□□□ 0.11
ABCD4-221ENST00000554453 AXIN2Q9Y2T1 843 aa15.72■□□□□ 0.11
ABCD4-221ENST00000554453 THSD7AQ9UPZ6 1657 aa15.71■□□□□ 0.11
ABCD4-221ENST00000554453 ST20-MTHFSA0A0A6YYL1 179 aa15.71■□□□□ 0.11
ABCD4-221ENST00000554453 TESK2Q96S53 571 aa15.71■□□□□ 0.11
ABCD4-221ENST00000554453 LMO7Q8WWI1 1683 aa15.7■□□□□ 0.1
ABCD4-221ENST00000554453 SLIT3O75094 1523 aa15.7■□□□□ 0.1
ABCD4-221ENST00000554453 EN1Q05925 392 aaPredicted RBP15.7■□□□□ 0.1
ABCD4-221ENST00000554453 HDGFL2Q7Z4V5 671 aaPredicted RBP15.7■□□□□ 0.1
ABCD4-221ENST00000554453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.7■□□□□ 0.1
ABCD4-221ENST00000554453 TRIM37O94972 964 aa15.69■□□□□ 0.1
ABCD4-221ENST00000554453 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
ABCD4-221ENST00000554453 USP31Q70CQ4 1352 aa15.69■□□□□ 0.1
ABCD4-221ENST00000554453 AKAP12Q02952 1782 aa15.69■□□□□ 0.1
ABCD4-221ENST00000554453 COL5A2P05997 1499 aaPredicted RBP15.68■□□□□ 0.1
ABCD4-221ENST00000554453 C11orf95C9JLR9 678 aaPredicted RBP15.68■□□□□ 0.1
ABCD4-221ENST00000554453 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
ABCD4-221ENST00000554453 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
ABCD4-221ENST00000554453 CRB1P82279 1406 aa15.68■□□□□ 0.1
ABCD4-221ENST00000554453 CAMKK2Q96RR4 588 aa15.67■□□□□ 0.1
ABCD4-221ENST00000554453 COL18A1P39060 1754 aa15.67■□□□□ 0.1
ABCD4-221ENST00000554453 WDR17Q8IZU2 1322 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms