RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 A0A0G2JS52 829 aa18.43■□□□□ 0.54
XRCC3-206ENST00000554170 MYT1Q01538 1121 aa18.43■□□□□ 0.54
XRCC3-206ENST00000554170 BAG6P46379 1132 aa18.42■□□□□ 0.54
XRCC3-206ENST00000554170 FAM98CQ17RN3 349 aaKnown RBP18.42■□□□□ 0.54
XRCC3-206ENST00000554170 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
XRCC3-206ENST00000554170 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
XRCC3-206ENST00000554170 TULP4Q9NRJ4 1543 aa18.41■□□□□ 0.54
XRCC3-206ENST00000554170 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
XRCC3-206ENST00000554170 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
XRCC3-206ENST00000554170 THSD7AQ9UPZ6 1657 aa18.41■□□□□ 0.54
XRCC3-206ENST00000554170 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
XRCC3-206ENST00000554170 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.53
XRCC3-206ENST00000554170 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
XRCC3-206ENST00000554170 ITSN1Q15811 1721 aa18.39■□□□□ 0.53
XRCC3-206ENST00000554170 PRR36Q9H6K5 1346 aa18.39■□□□□ 0.53
XRCC3-206ENST00000554170 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
XRCC3-206ENST00000554170 SPATA31A5Q5VU36 1347 aa18.38■□□□□ 0.53
XRCC3-206ENST00000554170 SPATA31A7Q8IWB4 1347 aa18.38■□□□□ 0.53
XRCC3-206ENST00000554170 CLSPNQ9HAW4 1339 aa18.38■□□□□ 0.53
XRCC3-206ENST00000554170 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-206ENST00000554170 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-206ENST00000554170 ARHGEF28Q8N1W1 1705 aaKnown RBP18.35■□□□□ 0.53
XRCC3-206ENST00000554170 DISP2A7MBM2 1401 aa18.35■□□□□ 0.53
XRCC3-206ENST00000554170 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
XRCC3-206ENST00000554170 EN1Q05925 392 aaPredicted RBP18.35■□□□□ 0.53
XRCC3-206ENST00000554170 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
XRCC3-206ENST00000554170 FAM182BQ5T319 152 aa18.34■□□□□ 0.53
XRCC3-206ENST00000554170 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
XRCC3-206ENST00000554170 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.52
XRCC3-206ENST00000554170 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-206ENST00000554170 ATP7BP35670 1465 aa18.31■□□□□ 0.52
XRCC3-206ENST00000554170 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
XRCC3-206ENST00000554170 NBPF1Q3BBV0 1214 aa18.3■□□□□ 0.52
XRCC3-206ENST00000554170 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
XRCC3-206ENST00000554170 SPATA31A1Q5TZJ5 1347 aa18.29■□□□□ 0.52
XRCC3-206ENST00000554170 TOPAZ1Q8N9V7 1692 aa18.28■□□□□ 0.52
XRCC3-206ENST00000554170 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
XRCC3-206ENST00000554170 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
XRCC3-206ENST00000554170 EZH2Q15910 746 aaKnown RBP18.27■□□□□ 0.52
XRCC3-206ENST00000554170 RREB1Q92766 1687 aa18.26■□□□□ 0.51
XRCC3-206ENST00000554170 CHRNA2Q15822 529 aa18.26■□□□□ 0.51
XRCC3-206ENST00000554170 NBPF8Q3BBV2 869 aa18.26■□□□□ 0.51
XRCC3-206ENST00000554170 FAM196AQ6ZSG2 479 aa18.26■□□□□ 0.51
XRCC3-206ENST00000554170 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
XRCC3-206ENST00000554170 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
XRCC3-206ENST00000554170 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
XRCC3-206ENST00000554170 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
XRCC3-206ENST00000554170 NRKQ7Z2Y5 1582 aa18.25■□□□□ 0.51
XRCC3-206ENST00000554170 NUP188Q5SRE5 1749 aa18.24■□□□□ 0.51
XRCC3-206ENST00000554170 TRIM37O94972 964 aa18.24■□□□□ 0.51
XRCC3-206ENST00000554170 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
XRCC3-206ENST00000554170 POLR3AO14802 1390 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-206ENST00000554170 ZC3H6P61129 1189 aaKnown RBP18.23■□□□□ 0.51
XRCC3-206ENST00000554170 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
XRCC3-206ENST00000554170 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
XRCC3-206ENST00000554170 TRPM1Q7Z4N2 1603 aa18.22■□□□□ 0.51
XRCC3-206ENST00000554170 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
XRCC3-206ENST00000554170 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
XRCC3-206ENST00000554170 USP35Q9P2H5 1018 aa18.21■□□□□ 0.51
XRCC3-206ENST00000554170 CAMTA1Q9Y6Y1 1673 aa18.21■□□□□ 0.51
XRCC3-206ENST00000554170 APBA3O96018 575 aa18.2■□□□□ 0.5
XRCC3-206ENST00000554170 CDK19Q9BWU1 502 aa18.2■□□□□ 0.5
XRCC3-206ENST00000554170 CARD11Q9BXL7 1154 aa18.2■□□□□ 0.5
XRCC3-206ENST00000554170 EVA1CP58658 441 aa18.19■□□□□ 0.5
XRCC3-206ENST00000554170 ACEP12821 1306 aa18.19■□□□□ 0.5
XRCC3-206ENST00000554170 CENPJQ9HC77 1338 aaPredicted RBP18.19■□□□□ 0.5
XRCC3-206ENST00000554170 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
XRCC3-206ENST00000554170 PDE3BQ13370 1112 aa18.18■□□□□ 0.5
XRCC3-206ENST00000554170 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
XRCC3-206ENST00000554170 CPDO75976 1380 aa18.17■□□□□ 0.5
XRCC3-206ENST00000554170 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
XRCC3-206ENST00000554170 PLEKHG3A1L390 1219 aa18.16■□□□□ 0.5
XRCC3-206ENST00000554170 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
XRCC3-206ENST00000554170 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
XRCC3-206ENST00000554170 USP19O94966 1318 aa18.16■□□□□ 0.5
XRCC3-206ENST00000554170 SBF2Q86WG5 1849 aa18.14■□□□□ 0.5
XRCC3-206ENST00000554170 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.49
XRCC3-206ENST00000554170 RGPD3A6NKT7 1758 aaPredicted RBP18.13■□□□□ 0.49
XRCC3-206ENST00000554170 RGPD4Q7Z3J3 1758 aa18.13■□□□□ 0.49
XRCC3-206ENST00000554170 THRAP3Q9Y2W1 955 aaKnown RBP18.13■□□□□ 0.49
XRCC3-206ENST00000554170 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
XRCC3-206ENST00000554170 NBPF14Q5TI25 921 aa18.12■□□□□ 0.49
XRCC3-206ENST00000554170 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
XRCC3-206ENST00000554170 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
XRCC3-206ENST00000554170 LRRC37A3O60309 1634 aa18.1■□□□□ 0.49
XRCC3-206ENST00000554170 GCP02774 474 aa18.1■□□□□ 0.49
XRCC3-206ENST00000554170 NLRP13Q86W25 1043 aa18.1■□□□□ 0.49
XRCC3-206ENST00000554170 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
XRCC3-206ENST00000554170 CRB1P82279 1406 aa18.09■□□□□ 0.49
XRCC3-206ENST00000554170 SRPK2P78362 688 aaKnown RBP18.09■□□□□ 0.49
XRCC3-206ENST00000554170 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
XRCC3-206ENST00000554170 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
XRCC3-206ENST00000554170 C11orf95C9JLR9 678 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-206ENST00000554170 OVOS2A0A0G2JMS6 1433 aa18.07■□□□□ 0.48
XRCC3-206ENST00000554170 OVOS2A0A0J9YW53 1432 aa18.07■□□□□ 0.48
XRCC3-206ENST00000554170 OVOS2Q6IE36 1432 aa18.07■□□□□ 0.48
XRCC3-206ENST00000554170 SLIT3O75094 1523 aa18.07■□□□□ 0.48
XRCC3-206ENST00000554170 COL18A1P39060 1754 aa18.07■□□□□ 0.48
XRCC3-206ENST00000554170 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
XRCC3-206ENST00000554170 SPON1Q9HCB6 807 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms