RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 NGEFQ8N5V2 710 aa14.68□□□□□ -0.06
PABPN1-203ENST00000553960 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
PABPN1-203ENST00000553960 KIF24Q5T7B8 1368 aa14.68□□□□□ -0.06
PABPN1-203ENST00000553960 CADPS2Q86UW7 1296 aa14.67□□□□□ -0.06
PABPN1-203ENST00000553960 MORC1Q86VD1 984 aa14.67□□□□□ -0.06
PABPN1-203ENST00000553960 TTC21BQ7Z4L5 1316 aa14.66□□□□□ -0.06
PABPN1-203ENST00000553960 C1orf167Q5SNV9 1468 aa14.66□□□□□ -0.06
PABPN1-203ENST00000553960 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
PABPN1-203ENST00000553960 CENPBP07199 599 aaPredicted RBP14.64□□□□□ -0.07
PABPN1-203ENST00000553960 PHF8Q9UPP1 1060 aa14.64□□□□□ -0.07
PABPN1-203ENST00000553960 MSH6P52701 1360 aa14.63□□□□□ -0.07
PABPN1-203ENST00000553960 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
PABPN1-203ENST00000553960 CDK12Q9NYV4 1490 aaPredicted RBP14.63□□□□□ -0.07
PABPN1-203ENST00000553960 PHRF1Q9P1Y6 1649 aaKnown RBP14.62□□□□□ -0.07
PABPN1-203ENST00000553960 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
PABPN1-203ENST00000553960 TRPM3Q9HCF6 1732 aaPredicted RBP14.61□□□□□ -0.07
PABPN1-203ENST00000553960 LTBP4Q8N2S1 1624 aa14.61□□□□□ -0.07
PABPN1-203ENST00000553960 PIK3C2AO00443 1686 aa14.61□□□□□ -0.07
PABPN1-203ENST00000553960 SHPRHQ149N8 1683 aa14.61□□□□□ -0.07
PABPN1-203ENST00000553960 MARF1Q9Y4F3 1742 aaKnown RBP14.61□□□□□ -0.07
PABPN1-203ENST00000553960 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
PABPN1-203ENST00000553960 MAP2P11137 1827 aaKnown RBP14.59□□□□□ -0.07
PABPN1-203ENST00000553960 ATF3P18847 181 aa14.59□□□□□ -0.07
PABPN1-203ENST00000553960 NGDNQ8NEJ9 315 aaKnown RBP14.59□□□□□ -0.07
PABPN1-203ENST00000553960 COG3Q96JB2 828 aa14.59□□□□□ -0.07
PABPN1-203ENST00000553960 CFAP53Q96M91 514 aa14.59□□□□□ -0.07
PABPN1-203ENST00000553960 MTHFSP49914 203 aa14.58□□□□□ -0.08
PABPN1-203ENST00000553960 GGNBP2Q9H3C7 697 aa14.58□□□□□ -0.08
PABPN1-203ENST00000553960 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
PABPN1-203ENST00000553960 POLKQ9UBT6 870 aa14.57□□□□□ -0.08
PABPN1-203ENST00000553960 ALS2Q96Q42 1657 aa14.57□□□□□ -0.08
PABPN1-203ENST00000553960 ZNF335Q9H4Z2 1342 aaPredicted RBP14.57□□□□□ -0.08
PABPN1-203ENST00000553960 NME9Q86XW9 330 aa14.56□□□□□ -0.08
PABPN1-203ENST00000553960 SLIT3O75094 1523 aa14.56□□□□□ -0.08
PABPN1-203ENST00000553960 ABCC6O95255 1503 aa14.56□□□□□ -0.08
PABPN1-203ENST00000553960 USP19O94966 1318 aa14.55□□□□□ -0.08
PABPN1-203ENST00000553960 NPHP3Q7Z494 1330 aa14.55□□□□□ -0.08
PABPN1-203ENST00000553960 MED1Q15648 1581 aaPredicted RBP14.55□□□□□ -0.08
PABPN1-203ENST00000553960 PDE3BQ13370 1112 aa14.54□□□□□ -0.08
PABPN1-203ENST00000553960 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
PABPN1-203ENST00000553960 C14orf37Q86TY3 774 aa14.54□□□□□ -0.08
PABPN1-203ENST00000553960 RTL1A6NKG5 1358 aa14.54□□□□□ -0.08
PABPN1-203ENST00000553960 PXDNQ92626 1479 aa14.53□□□□□ -0.08
PABPN1-203ENST00000553960 PSME1Q06323 249 aa14.53□□□□□ -0.08
PABPN1-203ENST00000553960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.53□□□□□ -0.08
PABPN1-203ENST00000553960 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
PABPN1-203ENST00000553960 PMFBP1Q8TBY8 1022 aa14.53□□□□□ -0.08
PABPN1-203ENST00000553960 NFAT5O94916 1531 aa14.52□□□□□ -0.08
PABPN1-203ENST00000553960 WDR43Q15061 677 aaKnown RBP eCLIP14.52□□□□□ -0.09
PABPN1-203ENST00000553960 ORAI2Q96SN7 254 aa14.52□□□□□ -0.09
PABPN1-203ENST00000553960 ADAMTS8Q9UP79 889 aa14.52□□□□□ -0.09
PABPN1-203ENST00000553960 NUDCQ9Y266 331 aa14.52□□□□□ -0.09
PABPN1-203ENST00000553960 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
PABPN1-203ENST00000553960 SOS2Q07890 1332 aaPredicted RBP14.51□□□□□ -0.09
PABPN1-203ENST00000553960 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
PABPN1-203ENST00000553960 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
PABPN1-203ENST00000553960 PNNQ9H307 717 aaKnown RBP14.51□□□□□ -0.09
PABPN1-203ENST00000553960 SLAIN2Q9P270 581 aa14.51□□□□□ -0.09
PABPN1-203ENST00000553960 NHSL1Q5SYE7 1610 aa14.51□□□□□ -0.09
PABPN1-203ENST00000553960 RGPD1P0DJD0 1748 aa14.5□□□□□ -0.09
PABPN1-203ENST00000553960 FCHSD2O94868 740 aa14.5□□□□□ -0.09
PABPN1-203ENST00000553960 HNRNPUQ00839 825 aaKnown RBP eCLIP14.5□□□□□ -0.09
PABPN1-203ENST00000553960 CCDC27Q2M243 656 aa14.5□□□□□ -0.09
PABPN1-203ENST00000553960 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
PABPN1-203ENST00000553960 FLT4P35916 1363 aa14.49□□□□□ -0.09
PABPN1-203ENST00000553960 ZNF521Q96K83 1311 aa14.49□□□□□ -0.09
PABPN1-203ENST00000553960 NUTM2FA1L443 756 aa14.49□□□□□ -0.09
PABPN1-203ENST00000553960 DIAPH1O60610 1272 aaKnown RBP14.49□□□□□ -0.09
PABPN1-203ENST00000553960 BRINP3Q76B58 766 aa14.48□□□□□ -0.09
PABPN1-203ENST00000553960 KRT28Q7Z3Y7 464 aa14.48□□□□□ -0.09
PABPN1-203ENST00000553960 CRYBG1Q9Y4K1 1723 aa14.48□□□□□ -0.09
PABPN1-203ENST00000553960 PEAK1Q9H792 1746 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 FOXO3O43524 673 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 IL13P35225 146 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 NLRP6P59044 892 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 ABTB2Q8N961 1025 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
PABPN1-203ENST00000553960 AHDC1Q5TGY3 1603 aaPredicted RBP14.47□□□□□ -0.09
PABPN1-203ENST00000553960 TNS3Q68CZ2 1445 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 KDRP35968 1356 aa14.47□□□□□ -0.09
PABPN1-203ENST00000553960 SPATA31A3Q5VYP0 1347 aa14.46□□□□□ -0.09
PABPN1-203ENST00000553960 NCAPD2Q15021 1401 aa14.46□□□□□ -0.09
PABPN1-203ENST00000553960 PLEKHF1Q96S99 279 aa14.45□□□□□ -0.1
PABPN1-203ENST00000553960 ZRANB1Q9UGI0 708 aa14.45□□□□□ -0.1
PABPN1-203ENST00000553960 CPDO75976 1380 aa14.45□□□□□ -0.1
PABPN1-203ENST00000553960 MAP3K19Q56UN5 1328 aa14.44□□□□□ -0.1
PABPN1-203ENST00000553960 YTHDC1Q96MU7 727 aaKnown RBP14.44□□□□□ -0.1
PABPN1-203ENST00000553960 ARHGEF25Q86VW2 580 aa14.43□□□□□ -0.1
PABPN1-203ENST00000553960 EMILIN1Q9Y6C2 1016 aa14.43□□□□□ -0.1
PABPN1-203ENST00000553960 TNNT2P45379 298 aaPredicted RBP14.42□□□□□ -0.1
PABPN1-203ENST00000553960 TRMT2AQ8IZ69 625 aaKnown RBP14.42□□□□□ -0.1
PABPN1-203ENST00000553960 IP6K1Q92551 441 aa14.42□□□□□ -0.1
PABPN1-203ENST00000553960 LTN1O94822 1766 aa14.42□□□□□ -0.1
PABPN1-203ENST00000553960 GCP02774 474 aa14.41□□□□□ -0.1
PABPN1-203ENST00000553960 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
PABPN1-203ENST00000553960 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
PABPN1-203ENST00000553960 CAMTA1Q9Y6Y1 1673 aa14.41□□□□□ -0.1
PABPN1-203ENST00000553960 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
PABPN1-203ENST00000553960 COL22A1Q8NFW1 1626 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms