RNA–Protein interactions for RNA: ENST00000553906.1

TRAV37-201, Transcript of T cell receptor alpha variable 37 (pseudogene), humanhuman

BASIC

Gene TRAV37, Length 342 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV37-201ENST00000553906 WASHC4Q2M389 1173 aa5.7□□□□□ -1.5
TRAV37-201ENST00000553906 ITGBL1O95965 494 aaPredicted RBP5.69□□□□□ -1.5
TRAV37-201ENST00000553906 IRF5Q13568 498 aa5.69□□□□□ -1.5
TRAV37-201ENST00000553906 FKBPLQ9UIM3 349 aa5.69□□□□□ -1.5
TRAV37-201ENST00000553906 GGCXP38435 758 aa5.68□□□□□ -1.5
TRAV37-201ENST00000553906 PTCRAQ6ISU1 281 aaPredicted RBP5.68□□□□□ -1.5
TRAV37-201ENST00000553906 ARMC2Q8NEN0 867 aa5.68□□□□□ -1.5
TRAV37-201ENST00000553906 FCF1Q9Y324 198 aaKnown RBP5.68□□□□□ -1.5
TRAV37-201ENST00000553906 NISCHQ9Y2I1 1504 aa5.68□□□□□ -1.5
TRAV37-201ENST00000553906 PPEF1O14829 653 aaPredicted RBP5.67□□□□□ -1.5
TRAV37-201ENST00000553906 GPR37L1O60883 481 aa5.67□□□□□ -1.5
TRAV37-201ENST00000553906 VAC14Q08AM6 782 aa5.67□□□□□ -1.5
TRAV37-201ENST00000553906 UNC93B1Q9H1C4 597 aa5.66□□□□□ -1.5
TRAV37-201ENST00000553906 C1orf115Q9H7X2 142 aa5.66□□□□□ -1.5
TRAV37-201ENST00000553906 ZC3H4Q9UPT8 1303 aaKnown RBP5.66□□□□□ -1.5
TRAV37-201ENST00000553906 POM121CA8CG34 1229 aa5.65□□□□□ -1.5
TRAV37-201ENST00000553906 RNF223E7ERA6 249 aa5.65□□□□□ -1.5
TRAV37-201ENST00000553906 ZBTB24O43167 697 aaPredicted RBP5.65□□□□□ -1.5
TRAV37-201ENST00000553906 PTK2Q05397 1052 aa5.65□□□□□ -1.5
TRAV37-201ENST00000553906 NBPF14Q5TI25 921 aa5.65□□□□□ -1.5
TRAV37-201ENST00000553906 PPP1R18Q6NYC8 613 aa5.65□□□□□ -1.5
TRAV37-201ENST00000553906 GPKOWQ92917 476 aaPredicted RBP eCLIP5.65□□□□□ -1.5
TRAV37-201ENST00000553906 CALR3Q96L12 384 aaKnown RBP5.65□□□□□ -1.5
TRAV37-201ENST00000553906 ARID3AQ99856 593 aa5.65□□□□□ -1.5
TRAV37-201ENST00000553906 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.65□□□□□ -1.5
TRAV37-201ENST00000553906 ZBBXA8MT70 800 aa5.64□□□□□ -1.51
TRAV37-201ENST00000553906 NR1H3Q13133 447 aa5.64□□□□□ -1.51
TRAV37-201ENST00000553906 HDGFL1Q5TGJ6 251 aa5.64□□□□□ -1.51
TRAV37-201ENST00000553906 PDXDC2PQ6P474 469 aa5.64□□□□□ -1.51
TRAV37-201ENST00000553906 ANKLE1Q8NAG6 615 aa5.64□□□□□ -1.51
TRAV37-201ENST00000553906 BAP1Q92560 729 aa5.64□□□□□ -1.51
TRAV37-201ENST00000553906 FBXO45P0C2W1 286 aa5.63□□□□□ -1.51
TRAV37-201ENST00000553906 EIF4G2P78344 907 aaKnown RBP eCLIP5.63□□□□□ -1.51
TRAV37-201ENST00000553906 SEMA3FQ13275 785 aa5.63□□□□□ -1.51
TRAV37-201ENST00000553906 LINC01559Q495D7 138 aa5.63□□□□□ -1.51
TRAV37-201ENST00000553906 GLMNQ92990 594 aa5.63□□□□□ -1.51
TRAV37-201ENST00000553906 CCDC97Q96F63 343 aaPredicted RBP5.63□□□□□ -1.51
TRAV37-201ENST00000553906 GPSM3Q9Y4H4 160 aa5.63□□□□□ -1.51
TRAV37-201ENST00000553906 SOX11P35716 441 aa5.62□□□□□ -1.51
TRAV37-201ENST00000553906 AGERQ15109 404 aa5.62□□□□□ -1.51
TRAV37-201ENST00000553906 CCDC82Q8N4S0 544 aa5.62□□□□□ -1.51
TRAV37-201ENST00000553906 ARHGAP9Q9BRR9 750 aa5.62□□□□□ -1.51
TRAV37-201ENST00000553906 SERPINA10Q9UK55 444 aa5.62□□□□□ -1.51
TRAV37-201ENST00000553906 PLA2G2CQ5R387 149 aa5.61□□□□□ -1.51
TRAV37-201ENST00000553906 ZBTB33Q86T24 672 aa5.61□□□□□ -1.51
TRAV37-201ENST00000553906 ALG2Q9H553 416 aa5.61□□□□□ -1.51
TRAV37-201ENST00000553906 MAGEB6P1A0A0J9YX57 407 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 CD2BP2O95400 341 aaKnown RBP5.6□□□□□ -1.51
TRAV37-201ENST00000553906 IFFO2Q5TF58 517 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 BPHLQ86WA6 291 aaPredicted RBP5.6□□□□□ -1.51
TRAV37-201ENST00000553906 ZNF511Q8NB15 262 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 ADAM32Q8TC27 787 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 ADAMTS19Q8TE59 1207 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 FOXJ1Q92949 421 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 CARD14Q9BXL6 1004 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 PLA2G2EQ9NZK7 142 aa5.6□□□□□ -1.51
TRAV37-201ENST00000553906 RPIAP49247 311 aa5.59□□□□□ -1.51
TRAV37-201ENST00000553906 MCCD1P59942 119 aaPredicted RBP5.59□□□□□ -1.51
TRAV37-201ENST00000553906 SH3BP2P78314 561 aa5.59□□□□□ -1.51
TRAV37-201ENST00000553906 TRIM32Q13049 653 aa5.59□□□□□ -1.51
TRAV37-201ENST00000553906 SH3BP5LQ7L8J4 393 aa5.59□□□□□ -1.51
TRAV37-201ENST00000553906 DZIP3Q86Y13 1208 aaKnown RBP5.59□□□□□ -1.51
TRAV37-201ENST00000553906 ZNF592Q92610 1267 aa5.59□□□□□ -1.51
TRAV37-201ENST00000553906 OCSTAMPQ9BR26 566 aa5.59□□□□□ -1.51
TRAV37-201ENST00000553906 PCDHB9Q9Y5E1 797 aa5.59□□□□□ -1.51
TRAV37-201ENST00000553906 LIAT1Q6ZQX7 453 aa5.58□□□□□ -1.52
TRAV37-201ENST00000553906 WNT7BP56706 349 aa5.57□□□□□ -1.52
TRAV37-201ENST00000553906 SH3RF1Q7Z6J0 888 aa5.57□□□□□ -1.52
TRAV37-201ENST00000553906 CEP126Q9P2H0 1117 aa5.57□□□□□ -1.52
TRAV37-201ENST00000553906 SLC19A1P41440 591 aa5.56□□□□□ -1.52
TRAV37-201ENST00000553906 SKOR1P84550 965 aa5.56□□□□□ -1.52
TRAV37-201ENST00000553906 ERFEQ4G0M1 354 aa5.56□□□□□ -1.52
TRAV37-201ENST00000553906 C4orf48Q5BLP8 95 aa5.56□□□□□ -1.52
TRAV37-201ENST00000553906 TFIP11Q9UBB9 837 aaKnown RBP5.56□□□□□ -1.52
TRAV37-201ENST00000553906 A0A0G2JS52 829 aa5.55□□□□□ -1.52
TRAV37-201ENST00000553906 PALM3A6NDB9 673 aaPredicted RBP5.55□□□□□ -1.52
TRAV37-201ENST00000553906 RFX1P22670 979 aa5.55□□□□□ -1.52
TRAV37-201ENST00000553906 VARSP26640 1264 aaKnown RBP5.55□□□□□ -1.52
TRAV37-201ENST00000553906 SLFNL1Q499Z3 407 aa5.55□□□□□ -1.52
TRAV37-201ENST00000553906 RC3H1Q5TC82 1133 aaKnown RBP5.55□□□□□ -1.52
TRAV37-201ENST00000553906 EHBP1Q8NDI1 1231 aa5.55□□□□□ -1.52
TRAV37-201ENST00000553906 ARXQ96QS3 562 aa5.55□□□□□ -1.52
TRAV37-201ENST00000553906 PPP1R12CQ9BZL4 782 aa5.55□□□□□ -1.52
TRAV37-201ENST00000553906 LMOD1P29536 600 aaPredicted RBP5.54□□□□□ -1.52
TRAV37-201ENST00000553906 FAM174AQ8TBP5 190 aa5.54□□□□□ -1.52
TRAV37-201ENST00000553906 EMID1Q96A84 441 aaPredicted RBP5.54□□□□□ -1.52
TRAV37-201ENST00000553906 SLC10A4Q96EP9 437 aa5.54□□□□□ -1.52
TRAV37-201ENST00000553906 UCN2Q96RP3 112 aa5.54□□□□□ -1.52
TRAV37-201ENST00000553906 SKIP12755 728 aa5.53□□□□□ -1.52
TRAV37-201ENST00000553906 SPRYD7Q5W111 196 aa5.53□□□□□ -1.52
TRAV37-201ENST00000553906 TBC1D9Q6ZT07 1266 aa5.53□□□□□ -1.52
TRAV37-201ENST00000553906 RNF135Q8IUD6 432 aa5.53□□□□□ -1.52
TRAV37-201ENST00000553906 HOMEZQ8IX15 550 aa5.53□□□□□ -1.52
TRAV37-201ENST00000553906 C1QTNF2Q9BXJ5 285 aa5.53□□□□□ -1.52
TRAV37-201ENST00000553906 CDV3Q9UKY7 258 aaKnown RBP5.53□□□□□ -1.52
TRAV37-201ENST00000553906 PIK3CDO00329 1044 aa5.52□□□□□ -1.53
TRAV37-201ENST00000553906 ATP9BO43861 1147 aa5.52□□□□□ -1.53
TRAV37-201ENST00000553906 GIGYF1O75420 1035 aaPredicted RBP5.52□□□□□ -1.53
TRAV37-201ENST00000553906 ARID5BQ14865 1188 aa5.52□□□□□ -1.53
TRAV37-201ENST00000553906 CFAP70Q5T0N1 1121 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms