RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
CFAP54-204ENST00000553778 DCCP43146 1447 aa12.95□□□□□ -0.34
CFAP54-204ENST00000553778 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
CFAP54-204ENST00000553778 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
CFAP54-204ENST00000553778 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
CFAP54-204ENST00000553778 EXOC6Q8TAG9 804 aa12.94□□□□□ -0.34
CFAP54-204ENST00000553778 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
CFAP54-204ENST00000553778 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
CFAP54-204ENST00000553778 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
CFAP54-204ENST00000553778 NAP1L5Q96NT1 182 aaPredicted RBP12.93□□□□□ -0.34
CFAP54-204ENST00000553778 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
CFAP54-204ENST00000553778 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
CFAP54-204ENST00000553778 PDCL3Q9H2J4 239 aa12.92□□□□□ -0.34
CFAP54-204ENST00000553778 KIF7Q2M1P5 1343 aa12.91□□□□□ -0.34
CFAP54-204ENST00000553778 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
CFAP54-204ENST00000553778 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
CFAP54-204ENST00000553778 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
CFAP54-204ENST00000553778 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
CFAP54-204ENST00000553778 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
CFAP54-204ENST00000553778 TPM2P07951 284 aa12.9□□□□□ -0.34
CFAP54-204ENST00000553778 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
CFAP54-204ENST00000553778 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
CFAP54-204ENST00000553778 INSRP06213 1382 aa12.89□□□□□ -0.35
CFAP54-204ENST00000553778 MST1RQ04912 1400 aa12.89□□□□□ -0.35
CFAP54-204ENST00000553778 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
CFAP54-204ENST00000553778 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
CFAP54-204ENST00000553778 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
CFAP54-204ENST00000553778 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
CFAP54-204ENST00000553778 BRINP3Q76B58 766 aa12.88□□□□□ -0.35
CFAP54-204ENST00000553778 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
CFAP54-204ENST00000553778 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
CFAP54-204ENST00000553778 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
CFAP54-204ENST00000553778 SRPK2P78362 688 aaKnown RBP12.87□□□□□ -0.35
CFAP54-204ENST00000553778 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
CFAP54-204ENST00000553778 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
CFAP54-204ENST00000553778 USP47Q96K76 1375 aa12.86□□□□□ -0.35
CFAP54-204ENST00000553778 NUDT16Q96DE0 195 aaKnown RBP12.85□□□□□ -0.35
CFAP54-204ENST00000553778 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
CFAP54-204ENST00000553778 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
CFAP54-204ENST00000553778 HSPA1LP34931 641 aa12.85□□□□□ -0.35
CFAP54-204ENST00000553778 AAMPQ13685 434 aa12.85□□□□□ -0.35
CFAP54-204ENST00000553778 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
CFAP54-204ENST00000553778 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
CFAP54-204ENST00000553778 CENPQQ7L2Z9 268 aaPredicted RBP12.84□□□□□ -0.35
CFAP54-204ENST00000553778 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
CFAP54-204ENST00000553778 PRDM4Q9UKN5 801 aa12.84□□□□□ -0.35
CFAP54-204ENST00000553778 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
CFAP54-204ENST00000553778 ANKARQ7Z5J8 1434 aa12.83□□□□□ -0.35
CFAP54-204ENST00000553778 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.35
CFAP54-204ENST00000553778 SLC4A3P48751 1232 aa12.83□□□□□ -0.35
CFAP54-204ENST00000553778 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.35
CFAP54-204ENST00000553778 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.35
CFAP54-204ENST00000553778 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
CFAP54-204ENST00000553778 RBM10P98175 930 aaKnown RBP12.83□□□□□ -0.36
CFAP54-204ENST00000553778 PMFBP1Q8TBY8 1022 aa12.83□□□□□ -0.36
CFAP54-204ENST00000553778 FOXO3O43524 673 aa12.82□□□□□ -0.36
CFAP54-204ENST00000553778 TMF1P82094 1093 aa12.82□□□□□ -0.36
CFAP54-204ENST00000553778 FGD1P98174 961 aa12.82□□□□□ -0.36
CFAP54-204ENST00000553778 TESK2Q96S53 571 aa12.82□□□□□ -0.36
CFAP54-204ENST00000553778 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
CFAP54-204ENST00000553778 PRR36Q9H6K5 1346 aa12.82□□□□□ -0.36
CFAP54-204ENST00000553778 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
CFAP54-204ENST00000553778 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
CFAP54-204ENST00000553778 DDX17Q92841 729 aaKnown RBP12.81□□□□□ -0.36
CFAP54-204ENST00000553778 MAP7D2Q96T17 732 aa12.81□□□□□ -0.36
CFAP54-204ENST00000553778 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
CFAP54-204ENST00000553778 TERF1P54274 439 aa12.81□□□□□ -0.36
CFAP54-204ENST00000553778 PSME1Q06323 249 aa12.81□□□□□ -0.36
CFAP54-204ENST00000553778 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
CFAP54-204ENST00000553778 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
CFAP54-204ENST00000553778 CDCA8Q53HL2 280 aa12.8□□□□□ -0.36
CFAP54-204ENST00000553778 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
CFAP54-204ENST00000553778 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
CFAP54-204ENST00000553778 MRE11P49959 708 aa12.79□□□□□ -0.36
CFAP54-204ENST00000553778 BECN1Q14457 450 aa12.79□□□□□ -0.36
CFAP54-204ENST00000553778 CABP1Q9NZU7 370 aa12.79□□□□□ -0.36
CFAP54-204ENST00000553778 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
CFAP54-204ENST00000553778 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
CFAP54-204ENST00000553778 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
CFAP54-204ENST00000553778 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
CFAP54-204ENST00000553778 ATP7BP35670 1465 aa12.78□□□□□ -0.36
CFAP54-204ENST00000553778 USP32Q8NFA0 1604 aa12.77□□□□□ -0.36
CFAP54-204ENST00000553778 SOS2Q07890 1332 aaPredicted RBP12.77□□□□□ -0.36
CFAP54-204ENST00000553778 MYBBP1AQ9BQG0 1328 aaKnown RBP12.77□□□□□ -0.36
CFAP54-204ENST00000553778 ESPNB1AK53 854 aa12.77□□□□□ -0.37
CFAP54-204ENST00000553778 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
CFAP54-204ENST00000553778 RALBP1Q15311 655 aa12.77□□□□□ -0.37
CFAP54-204ENST00000553778 PPIP5K1Q6PFW1 1433 aa12.77□□□□□ -0.37
CFAP54-204ENST00000553778 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
CFAP54-204ENST00000553778 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
CFAP54-204ENST00000553778 ACEP12821 1306 aa12.76□□□□□ -0.37
CFAP54-204ENST00000553778 KIF1AQ12756 1690 aa12.75□□□□□ -0.37
CFAP54-204ENST00000553778 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
CFAP54-204ENST00000553778 ANTXR1Q9H6X2 564 aa12.75□□□□□ -0.37
CFAP54-204ENST00000553778 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
CFAP54-204ENST00000553778 JCADQ9P266 1359 aa12.74□□□□□ -0.37
CFAP54-204ENST00000553778 DISP3Q9P2K9 1392 aa12.74□□□□□ -0.37
CFAP54-204ENST00000553778 CRBNQ96SW2 442 aa12.74□□□□□ -0.37
CFAP54-204ENST00000553778 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
CFAP54-204ENST00000553778 POLR3AO14802 1390 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms