RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 THSD4Q6ZMP0 1018 aa6.76□□□□□ -1.33
TDP1-207ENST00000553617 RNF19BQ6ZMZ0 732 aa6.76□□□□□ -1.33
TDP1-207ENST00000553617 TBC1D9Q6ZT07 1266 aa6.76□□□□□ -1.33
TDP1-207ENST00000553617 SALL2Q9Y467 1007 aaPredicted RBP6.76□□□□□ -1.33
TDP1-207ENST00000553617 CARNS1A5YM72 827 aa6.75□□□□□ -1.33
TDP1-207ENST00000553617 ATP9BO43861 1147 aa6.75□□□□□ -1.33
TDP1-207ENST00000553617 MFAP1P55081 439 aaKnown RBP6.75□□□□□ -1.33
TDP1-207ENST00000553617 EIF4G2P78344 907 aaKnown RBP eCLIP6.75□□□□□ -1.33
TDP1-207ENST00000553617 BRICD5Q6PL45 260 aa6.75□□□□□ -1.33
TDP1-207ENST00000553617 BLOC1S3Q6QNY0 202 aa6.75□□□□□ -1.33
TDP1-207ENST00000553617 PNMA1Q8ND90 353 aa6.75□□□□□ -1.33
TDP1-207ENST00000553617 FBXO45P0C2W1 286 aa6.74□□□□□ -1.33
TDP1-207ENST00000553617 MRPL50Q8N5N7 158 aaKnown RBP6.74□□□□□ -1.33
TDP1-207ENST00000553617 THAP11Q96EK4 314 aa6.74□□□□□ -1.33
TDP1-207ENST00000553617 LRCH3Q96II8 777 aa6.74□□□□□ -1.33
TDP1-207ENST00000553617 USB1Q9BQ65 265 aaKnown RBP6.74□□□□□ -1.33
TDP1-207ENST00000553617 PRR14Q9BWN1 585 aa6.74□□□□□ -1.33
TDP1-207ENST00000553617 ZC3H4Q9UPT8 1303 aaKnown RBP6.74□□□□□ -1.33
TDP1-207ENST00000553617 ZBBXA8MT70 800 aa6.73□□□□□ -1.33
TDP1-207ENST00000553617 RGS20O76081 388 aa6.73□□□□□ -1.33
TDP1-207ENST00000553617 BCAMP50895 628 aa6.73□□□□□ -1.33
TDP1-207ENST00000553617 WNT2BQ93097 391 aa6.73□□□□□ -1.33
TDP1-207ENST00000553617 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.73□□□□□ -1.33
TDP1-207ENST00000553617 FKBPLQ9UIM3 349 aa6.73□□□□□ -1.33
TDP1-207ENST00000553617 GOLGA8CPA6NN73 597 aa6.72□□□□□ -1.33
TDP1-207ENST00000553617 ELOAQ14241 798 aaKnown RBP6.72□□□□□ -1.33
TDP1-207ENST00000553617 KANK4Q5T7N3 995 aaPredicted RBP6.72□□□□□ -1.33
TDP1-207ENST00000553617 NFATC2IPQ8NCF5 419 aa6.72□□□□□ -1.33
TDP1-207ENST00000553617 MTMR7Q9Y216 660 aa6.72□□□□□ -1.33
TDP1-207ENST00000553617 PIK3CDO00329 1044 aa6.71□□□□□ -1.34
TDP1-207ENST00000553617 JUNDP17535 347 aa6.71□□□□□ -1.34
TDP1-207ENST00000553617 PTPRNQ16849 979 aa6.71□□□□□ -1.34
TDP1-207ENST00000553617 CDCA8Q53HL2 280 aa6.71□□□□□ -1.34
TDP1-207ENST00000553617 VRTNQ9H8Y1 702 aa6.71□□□□□ -1.34
TDP1-207ENST00000553617 MAP10Q9P2G4 905 aa6.71□□□□□ -1.34
TDP1-207ENST00000553617 A0A0G2JS52 829 aa6.7□□□□□ -1.34
TDP1-207ENST00000553617 APLP1P51693 650 aa6.7□□□□□ -1.34
TDP1-207ENST00000553617 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
TDP1-207ENST00000553617 SCUBE3Q8IX30 993 aa6.7□□□□□ -1.34
TDP1-207ENST00000553617 ZMIZ1Q9ULJ6 1067 aa6.7□□□□□ -1.34
TDP1-207ENST00000553617 SOWAHBA6NEL2 793 aa6.69□□□□□ -1.34
TDP1-207ENST00000553617 FMNL1O95466 1100 aaPredicted RBP6.69□□□□□ -1.34
TDP1-207ENST00000553617 HPS5Q9UPZ3 1129 aa6.69□□□□□ -1.34
TDP1-207ENST00000553617 USP17L3A6NCW0 530 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 USP17L4A6NCW7 530 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 NR1I2O75469 434 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 MSS51Q4VC12 460 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 USP17L2Q6R6M4 530 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 USP17L1Q7RTZ2 530 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 FAM174AQ8TBP5 190 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 GNEQ9Y223 722 aaKnown RBP6.68□□□□□ -1.34
TDP1-207ENST00000553617 GPSM3Q9Y4H4 160 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 IVNS1ABPQ9Y6Y0 642 aa6.68□□□□□ -1.34
TDP1-207ENST00000553617 USP17L5A8MUK1 530 aa6.67□□□□□ -1.34
TDP1-207ENST00000553617 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
TDP1-207ENST00000553617 PPP4CP60510 307 aa6.67□□□□□ -1.34
TDP1-207ENST00000553617 ANKK1Q8NFD2 765 aa6.67□□□□□ -1.34
TDP1-207ENST00000553617 OCSTAMPQ9BR26 566 aa6.67□□□□□ -1.34
TDP1-207ENST00000553617 PCDHB3Q9Y5E6 796 aa6.67□□□□□ -1.34
TDP1-207ENST00000553617 TMEM164Q5U3C3 297 aa6.66□□□□□ -1.34
TDP1-207ENST00000553617 SND1Q7KZF4 910 aaKnown RBP eCLIP6.66□□□□□ -1.34
TDP1-207ENST00000553617 STK32AQ8WU08 396 aa6.66□□□□□ -1.34
TDP1-207ENST00000553617 GPKOWQ92917 476 aaPredicted RBP eCLIP6.66□□□□□ -1.342e-6■■■□□ 15.9
TDP1-207ENST00000553617 TSR3Q9UJK0 312 aaKnown RBP6.66□□□□□ -1.34
TDP1-207ENST00000553617 FAM196BA6NMK8 535 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 CCNYL3P0C7X3 344 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 SKIP12755 728 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 MMP16P51512 607 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 FOXD4L5Q5VV16 416 aaPredicted RBP6.65□□□□□ -1.34
TDP1-207ENST00000553617 PDXDC2PQ6P474 469 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 PHTF2Q8N3S3 785 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 FAM160A2Q8N612 972 aaPredicted RBP6.65□□□□□ -1.34
TDP1-207ENST00000553617 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
TDP1-207ENST00000553617 EVA1BQ9NVM1 165 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 WBP1LQ9NX94 342 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 CHIC2Q9UKJ5 165 aa6.65□□□□□ -1.34
TDP1-207ENST00000553617 KCNH2Q12809 1159 aa6.64□□□□□ -1.35
TDP1-207ENST00000553617 B4GALNT3Q6L9W6 998 aa6.64□□□□□ -1.35
TDP1-207ENST00000553617 PHLDB3Q6NSJ2 640 aa6.64□□□□□ -1.35
TDP1-207ENST00000553617 IRX2Q9BZI1 471 aaPredicted RBP6.64□□□□□ -1.35
TDP1-207ENST00000553617 CEP126Q9P2H0 1117 aa6.64□□□□□ -1.35
TDP1-207ENST00000553617 NOVA2Q9UNW9 492 aaKnown RBP6.64□□□□□ -1.35
TDP1-207ENST00000553617 USP17L15C9J2P7 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L10C9JJH3 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L13C9JLJ4 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L12C9JPN9 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L11C9JVI0 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L21D6R901 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L18D6R9N7 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L22D6RA61 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L17D6RBQ6 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L19D6RCP7 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L20D6RJB6 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 ITGBL1O95965 494 aaPredicted RBP6.63□□□□□ -1.35
TDP1-207ENST00000553617 CTHP32929 405 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 MCCD1P59942 119 aaPredicted RBP6.63□□□□□ -1.35
TDP1-207ENST00000553617 PTK2Q05397 1052 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 USP17L24Q0WX57 530 aa6.63□□□□□ -1.35
TDP1-207ENST00000553617 CRTC2Q53ET0 693 aaPredicted RBP6.63□□□□□ -1.35
TDP1-207ENST00000553617 TXNDC2Q86VQ3 553 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms