RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
IFT43-205ENST00000553438 ADGRB1O14514 1584 aa15.1■□□□□ 0.01
IFT43-205ENST00000553438 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
IFT43-205ENST00000553438 FAM182BQ5T319 152 aa15.09■□□□□ 0.01
IFT43-205ENST00000553438 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
IFT43-205ENST00000553438 TULP4Q9NRJ4 1543 aa15.07■□□□□ 0
IFT43-205ENST00000553438 WASLO00401 505 aaPredicted RBP15.07■□□□□ 0
IFT43-205ENST00000553438 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
IFT43-205ENST00000553438 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
IFT43-205ENST00000553438 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
IFT43-205ENST00000553438 R3HDM1Q15032 1099 aaKnown RBP15.06■□□□□ 0
IFT43-205ENST00000553438 DISP2A7MBM2 1401 aa15.06■□□□□ 0
IFT43-205ENST00000553438 RGPD1P0DJD0 1748 aa15.06■□□□□ 0
IFT43-205ENST00000553438 THSD7AQ9UPZ6 1657 aa15.05■□□□□ -0
IFT43-205ENST00000553438 KIAA0232Q92628 1395 aa15.03■□□□□ -0
IFT43-205ENST00000553438 SPATA31A1Q5TZJ5 1347 aa15.03■□□□□ -0
IFT43-205ENST00000553438 EZH2Q15910 746 aaKnown RBP15.03■□□□□ -0
IFT43-205ENST00000553438 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
IFT43-205ENST00000553438 CRYBG1Q9Y4K1 1723 aa15.03■□□□□ -0
IFT43-205ENST00000553438 TNS1Q9HBL0 1735 aaKnown RBP15.01□□□□□ -0.01
IFT43-205ENST00000553438 TRIM37O94972 964 aa15.01□□□□□ -0.01
IFT43-205ENST00000553438 CHRNA2Q15822 529 aa15.01□□□□□ -0.01
IFT43-205ENST00000553438 FAM196AQ6ZSG2 479 aa15.01□□□□□ -0.01
IFT43-205ENST00000553438 DCAF11Q8TEB1 546 aa15.01□□□□□ -0.01
IFT43-205ENST00000553438 STRN4Q9NRL3 753 aa15.01□□□□□ -0.01
IFT43-205ENST00000553438 RAB3GAP2Q9H2M9 1393 aa15□□□□□ -0.01
IFT43-205ENST00000553438 NUDT16Q96DE0 195 aaKnown RBP15□□□□□ -0.01
IFT43-205ENST00000553438 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
IFT43-205ENST00000553438 ATP7BP35670 1465 aa15□□□□□ -0.01
IFT43-205ENST00000553438 ZC3H6P61129 1189 aaKnown RBP14.99□□□□□ -0.01
IFT43-205ENST00000553438 APBA3O96018 575 aa14.98□□□□□ -0.01
IFT43-205ENST00000553438 NUTM2GQ5VZR2 741 aa14.98□□□□□ -0.01
IFT43-205ENST00000553438 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
IFT43-205ENST00000553438 PARD3Q8TEW0 1356 aa14.98□□□□□ -0.01
IFT43-205ENST00000553438 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
IFT43-205ENST00000553438 ITSN1Q15811 1721 aa14.97□□□□□ -0.01
IFT43-205ENST00000553438 PHRF1Q9P1Y6 1649 aaKnown RBP14.96□□□□□ -0.01
IFT43-205ENST00000553438 EVA1CP58658 441 aa14.96□□□□□ -0.01
IFT43-205ENST00000553438 BARGINQ6ZT62 677 aa14.96□□□□□ -0.01
IFT43-205ENST00000553438 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
IFT43-205ENST00000553438 SSH2Q76I76 1423 aa14.95□□□□□ -0.02
IFT43-205ENST00000553438 PDE3BQ13370 1112 aa14.95□□□□□ -0.02
IFT43-205ENST00000553438 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
IFT43-205ENST00000553438 POLR3AO14802 1390 aaPredicted RBP14.95□□□□□ -0.02
IFT43-205ENST00000553438 NBPF8Q3BBV2 869 aa14.94□□□□□ -0.02
IFT43-205ENST00000553438 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
IFT43-205ENST00000553438 ACEP12821 1306 aa14.93□□□□□ -0.02
IFT43-205ENST00000553438 LARP1Q6PKG0 1096 aaKnown RBP14.93□□□□□ -0.02
IFT43-205ENST00000553438 TCP11L2Q8N4U5 519 aa14.93□□□□□ -0.02
IFT43-205ENST00000553438 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
IFT43-205ENST00000553438 ABTB2Q8N961 1025 aa14.92□□□□□ -0.02
IFT43-205ENST00000553438 NRKQ7Z2Y5 1582 aa14.92□□□□□ -0.02
IFT43-205ENST00000553438 CAMTA1Q9Y6Y1 1673 aa14.92□□□□□ -0.02
IFT43-205ENST00000553438 CPDO75976 1380 aa14.91□□□□□ -0.02
IFT43-205ENST00000553438 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
IFT43-205ENST00000553438 USP19O94966 1318 aa14.91□□□□□ -0.02
IFT43-205ENST00000553438 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
IFT43-205ENST00000553438 RREB1Q92766 1687 aa14.9□□□□□ -0.02
IFT43-205ENST00000553438 THRAP3Q9Y2W1 955 aaKnown RBP14.89□□□□□ -0.03
IFT43-205ENST00000553438 NUP188Q5SRE5 1749 aa14.89□□□□□ -0.03
IFT43-205ENST00000553438 LMO7Q8WWI1 1683 aa14.88□□□□□ -0.03
IFT43-205ENST00000553438 NLRP13Q86W25 1043 aa14.88□□□□□ -0.03
IFT43-205ENST00000553438 GCP02774 474 aa14.87□□□□□ -0.03
IFT43-205ENST00000553438 YY1P25490 414 aa14.86□□□□□ -0.03
IFT43-205ENST00000553438 SPON1Q9HCB6 807 aa14.86□□□□□ -0.03
IFT43-205ENST00000553438 COL5A2P05997 1499 aaPredicted RBP14.86□□□□□ -0.03
IFT43-205ENST00000553438 C11orf95C9JLR9 678 aaPredicted RBP14.85□□□□□ -0.03
IFT43-205ENST00000553438 SRPK2P78362 688 aaKnown RBP14.85□□□□□ -0.03
IFT43-205ENST00000553438 PPP1R1BQ9UD71 204 aaPredicted RBP14.85□□□□□ -0.03
IFT43-205ENST00000553438 PPIP5K1Q6PFW1 1433 aa14.84□□□□□ -0.03
IFT43-205ENST00000553438 KCNQ2O43526 872 aa14.84□□□□□ -0.03
IFT43-205ENST00000553438 CRB1P82279 1406 aa14.83□□□□□ -0.03
IFT43-205ENST00000553438 PARP4Q9UKK3 1724 aaKnown RBP14.83□□□□□ -0.03
IFT43-205ENST00000553438 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
IFT43-205ENST00000553438 NBPF1Q3BBV0 1214 aa14.83□□□□□ -0.04
IFT43-205ENST00000553438 CABP2Q9NPB3 220 aa14.83□□□□□ -0.04
IFT43-205ENST00000553438 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
IFT43-205ENST00000553438 KIAA1210Q9ULL0 1709 aa14.83□□□□□ -0.04
IFT43-205ENST00000553438 OVOS2A0A0G2JMS6 1433 aa14.83□□□□□ -0.04
IFT43-205ENST00000553438 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.04
IFT43-205ENST00000553438 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.04
IFT43-205ENST00000553438 AATKQ6ZMQ8 1374 aa14.82□□□□□ -0.04
IFT43-205ENST00000553438 NINLQ9Y2I6 1382 aa14.82□□□□□ -0.04
IFT43-205ENST00000553438 PLSCR1O15162 318 aa14.81□□□□□ -0.04
IFT43-205ENST00000553438 NLRP6P59044 892 aa14.81□□□□□ -0.04
IFT43-205ENST00000553438 DDB1Q16531 1140 aa14.81□□□□□ -0.04
IFT43-205ENST00000553438 CENPJQ9HC77 1338 aaPredicted RBP14.81□□□□□ -0.04
IFT43-205ENST00000553438 PEAK1Q9H792 1746 aa14.8□□□□□ -0.04
IFT43-205ENST00000553438 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
IFT43-205ENST00000553438 USP6P35125 1406 aa14.8□□□□□ -0.04
IFT43-205ENST00000553438 TOM1L2Q6ZVM7 507 aa14.79□□□□□ -0.04
IFT43-205ENST00000553438 ANO8Q9HCE9 1232 aaPredicted RBP14.79□□□□□ -0.04
IFT43-205ENST00000553438 CABP1Q9NZU7 370 aa14.79□□□□□ -0.04
IFT43-205ENST00000553438 LRRC37A3O60309 1634 aa14.78□□□□□ -0.04
IFT43-205ENST00000553438 SLIT3O75094 1523 aa14.78□□□□□ -0.04
IFT43-205ENST00000553438 PTF1AQ7RTS3 328 aa14.78□□□□□ -0.04
IFT43-205ENST00000553438 BCL11BQ9C0K0 894 aaPredicted RBP14.78□□□□□ -0.04
IFT43-205ENST00000553438 RGPD3A6NKT7 1758 aaPredicted RBP14.77□□□□□ -0.05
IFT43-205ENST00000553438 RGPD4Q7Z3J3 1758 aa14.77□□□□□ -0.05
IFT43-205ENST00000553438 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms