RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	SLF2	Q8IX21	1173 aa		10.41	□□□□□ -0.74
PFKM-231	ENST00000553055	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.41	□□□□□ -0.74
PFKM-231	ENST00000553055	HOXA2	O43364	376 aa		10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	DNAJB2	P25686	324 aa		10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	SWI5	Q1ZZU3	235 aa		10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	TMEM92	Q6UXU6	159 aa		10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	NOL8	Q76FK4	1167 aa	Known RBP	10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	RDH13	Q8NBN7	331 aa		10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	C1orf216	Q8TAB5	229 aa		10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	MRC2	Q9UBG0	1479 aa		10.4	□□□□□ -0.74
PFKM-231	ENST00000553055	WDR62	O43379	1518 aa		10.39	□□□□□ -0.75
PFKM-231	ENST00000553055	HMGXB3	Q12766	1538 aa		10.39	□□□□□ -0.75
PFKM-231	ENST00000553055	SCAMP3	O14828	347 aa	Known RBP	10.39	□□□□□ -0.75
PFKM-231	ENST00000553055	SKI	P12755	728 aa		10.39	□□□□□ -0.75
PFKM-231	ENST00000553055	CDCA7L	Q96GN5	454 aa		10.39	□□□□□ -0.75
PFKM-231	ENST00000553055	ASB16	Q96NS5	453 aa		10.39	□□□□□ -0.75
PFKM-231	ENST00000553055	ATP5J2-PTCD1	G3V325	749 aa		10.38	□□□□□ -0.75
PFKM-231	ENST00000553055	C7	P10643	843 aa		10.38	□□□□□ -0.75
PFKM-231	ENST00000553055	MAPK1	P28482	360 aa		10.38	□□□□□ -0.75
PFKM-231	ENST00000553055	CRTC2	Q53ET0	693 aa	Predicted RBP	10.38	□□□□□ -0.75
PFKM-231	ENST00000553055	EPS8L1	Q8TE68	723 aa		10.38	□□□□□ -0.75
PFKM-231	ENST00000553055	SLAIN2	Q9P270	581 aa		10.38	□□□□□ -0.75
PFKM-231	ENST00000553055	RASA1	P20936	1047 aa		10.37	□□□□□ -0.75
PFKM-231	ENST00000553055	FAM69C	Q0P6D2	419 aa		10.37	□□□□□ -0.75
PFKM-231	ENST00000553055	NR1H3	Q13133	447 aa		10.37	□□□□□ -0.75
PFKM-231	ENST00000553055	CERS3	Q8IU89	383 aa		10.37	□□□□□ -0.75
PFKM-231	ENST00000553055	TANGO6	Q9C0B7	1094 aa		10.37	□□□□□ -0.75
PFKM-231	ENST00000553055	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.37	□□□□□ -0.75
PFKM-231	ENST00000553055	MKRN1	Q9UHC7	482 aa	Known RBP	10.37	□□□□□ -0.75
PFKM-231	ENST00000553055		H3BRB1	525 aa		10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	ITGAE	P38570	1179 aa		10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	IRX5	P78411	483 aa	Predicted RBP	10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	PTK7	Q13308	1070 aa		10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	EAPP	Q56P03	285 aa	Predicted RBP	10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	GLYCTK	Q8IVS8	523 aa		10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	EYA1	Q99502	592 aa		10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	TUT1	Q9H6E5	874 aa	Known RBP	10.36	□□□□□ -0.75
PFKM-231	ENST00000553055	PIK3CD	O00329	1044 aa		10.35	□□□□□ -0.75
PFKM-231	ENST00000553055	ABL1	P00519	1130 aa		10.35	□□□□□ -0.75
PFKM-231	ENST00000553055	RNF135	Q8IUD6	432 aa		10.35	□□□□□ -0.75
PFKM-231	ENST00000553055	ANKMY2	Q8IV38	441 aa		10.35	□□□□□ -0.75
PFKM-231	ENST00000553055	DCTN4	Q9UJW0	460 aa		10.35	□□□□□ -0.75
PFKM-231	ENST00000553055	NR6A1	Q15406	480 aa		10.34	□□□□□ -0.75
PFKM-231	ENST00000553055	PIK3R5	Q8WYR1	880 aa		10.34	□□□□□ -0.75
PFKM-231	ENST00000553055	ARAP1	Q96P48	1450 aa		10.34	□□□□□ -0.75
PFKM-231	ENST00000553055	TAGLN	Q01995	201 aa	Known RBP	10.33	□□□□□ -0.76
PFKM-231	ENST00000553055	IER5L	Q5T953	404 aa		10.33	□□□□□ -0.76
PFKM-231	ENST00000553055	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.33	□□□□□ -0.76
PFKM-231	ENST00000553055	ZDHHC16	Q969W1	377 aa		10.33	□□□□□ -0.76
PFKM-231	ENST00000553055	BACH2	Q9BYV9	841 aa		10.33	□□□□□ -0.76
PFKM-231	ENST00000553055	TMEM134	Q9H6X4	195 aa		10.33	□□□□□ -0.76
PFKM-231	ENST00000553055	PCDHGC3	Q9UN70	934 aa		10.33	□□□□□ -0.76
PFKM-231	ENST00000553055	MARCH6	O60337	910 aa		10.32	□□□□□ -0.76
PFKM-231	ENST00000553055	HDLBP	Q00341	1268 aa	Known RBP	10.32	□□□□□ -0.76
PFKM-231	ENST00000553055	PSMD1	Q99460	953 aa		10.32	□□□□□ -0.76
PFKM-231	ENST00000553055	CFAP99	D6REC4	459 aa		10.31	□□□□□ -0.76
PFKM-231	ENST00000553055	ICMT	O60725	284 aa		10.31	□□□□□ -0.76
PFKM-231	ENST00000553055	PLCG2	P16885	1265 aa		10.31	□□□□□ -0.76
PFKM-231	ENST00000553055	FOSB	P53539	338 aa		10.31	□□□□□ -0.76
PFKM-231	ENST00000553055	DEPDC4	Q8N2C3	294 aa		10.31	□□□□□ -0.76
PFKM-231	ENST00000553055	ZNF592	Q92610	1267 aa		10.31	□□□□□ -0.76
PFKM-231	ENST00000553055	DNAJC2	Q99543	621 aa	Known RBP	10.31	□□□□□ -0.76
PFKM-231	ENST00000553055	GCGR	P47871	477 aa		10.3	□□□□□ -0.76
PFKM-231	ENST00000553055	LNPK	Q9C0E8	428 aa		10.3	□□□□□ -0.76
PFKM-231	ENST00000553055	BRPF3	Q9ULD4	1205 aa		10.3	□□□□□ -0.76
PFKM-231	ENST00000553055	NBPF26	B4DH59	902 aa		10.29	□□□□□ -0.76
PFKM-231	ENST00000553055	C6orf229	H3BNL8	230 aa		10.29	□□□□□ -0.76
PFKM-231	ENST00000553055	ATP2B1	P20020	1258 aa		10.29	□□□□□ -0.76
PFKM-231	ENST00000553055	CC2D2B	Q6DHV5	1058 aa		10.29	□□□□□ -0.76
PFKM-231	ENST00000553055	ARMC5	Q96C12	935 aa		10.29	□□□□□ -0.76
PFKM-231	ENST00000553055	TLDC2	A0PJX2	215 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	ZBBX	A8MT70	800 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	C21orf2	O43822	256 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	FGD1	P98174	961 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	ZNF211	Q13398	564 aa	Predicted RBP	10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	NCOA4	Q13772	614 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	MRPL58	Q14197	206 aa	Known RBP	10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	ZNF662	Q6ZS27	426 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	MICAL1	Q8TDZ2	1067 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	NLRP2	Q9NX02	1062 aa		10.28	□□□□□ -0.76
PFKM-231	ENST00000553055	FBXO45	P0C2W1	286 aa		10.27	□□□□□ -0.77
PFKM-231	ENST00000553055	GUCA2A	Q02747	115 aa		10.27	□□□□□ -0.77
PFKM-231	ENST00000553055	DPYD	Q12882	1025 aa		10.27	□□□□□ -0.77
PFKM-231	ENST00000553055	RGL4	Q8IZJ4	473 aa		10.27	□□□□□ -0.77
PFKM-231	ENST00000553055	SLC43A3	Q8NBI5	491 aa		10.27	□□□□□ -0.77
PFKM-231	ENST00000553055	PRKAG2	Q9UGJ0	569 aa		10.27	□□□□□ -0.77
PFKM-231	ENST00000553055	SLFNL1	Q499Z3	407 aa		10.26	□□□□□ -0.77
PFKM-231	ENST00000553055	GRIPAP1	Q4V328	841 aa		10.26	□□□□□ -0.77
PFKM-231	ENST00000553055	C9orf131	Q5VYM1	1079 aa		10.26	□□□□□ -0.77
PFKM-231	ENST00000553055	NUDT18	Q6ZVK8	323 aa		10.26	□□□□□ -0.77
PFKM-231	ENST00000553055	ZNF454	Q8N9F8	522 aa		10.26	□□□□□ -0.77
PFKM-231	ENST00000553055	SCNN1A	P37088	669 aa		10.25	□□□□□ -0.77
PFKM-231	ENST00000553055	ATP1A2	P50993	1020 aa		10.25	□□□□□ -0.77
PFKM-231	ENST00000553055	GNL2	Q13823	731 aa	Known RBP	10.25	□□□□□ -0.77
PFKM-231	ENST00000553055	TRIM50	Q86XT4	487 aa		10.25	□□□□□ -0.77
PFKM-231	ENST00000553055	FAM174A	Q8TBP5	190 aa		10.25	□□□□□ -0.77
PFKM-231	ENST00000553055	CCSER2	Q9H7U1	834 aa		10.25	□□□□□ -0.77
PFKM-231	ENST00000553055	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
PFKM-231	ENST00000553055	PCDHGA4	Q9Y5G9	962 aa		10.25	□□□□□ -0.77

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