RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 CHRNA2Q15822 529 aa10.29□□□□□ -0.76
LETMD1-236ENST00000553043 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
LETMD1-236ENST00000553043 UTRNP46939 3433 aa10.29□□□□□ -0.76
LETMD1-236ENST00000553043 CLTCL1P53675 1640 aa10.29□□□□□ -0.76
LETMD1-236ENST00000553043 KIF1AQ12756 1690 aa10.28□□□□□ -0.76
LETMD1-236ENST00000553043 RREB1Q92766 1687 aa10.28□□□□□ -0.76
LETMD1-236ENST00000553043 RRBP1Q9P2E9 1410 aaKnown RBP10.28□□□□□ -0.76
LETMD1-236ENST00000553043 LOC105371045A0A1W2PR82 267 aa10.28□□□□□ -0.76
LETMD1-236ENST00000553043 ITGAEP38570 1179 aa10.28□□□□□ -0.76
LETMD1-236ENST00000553043 GPR162Q16538 588 aa10.27□□□□□ -0.77
LETMD1-236ENST00000553043 ROCK1Q13464 1354 aa10.26□□□□□ -0.77
LETMD1-236ENST00000553043 ABCC11Q96J66 1382 aa10.26□□□□□ -0.77
LETMD1-236ENST00000553043 TECPR2O15040 1411 aa10.26□□□□□ -0.77
LETMD1-236ENST00000553043 NRXN1Q9ULB1 1477 aa10.26□□□□□ -0.77
LETMD1-236ENST00000553043 EVA1CP58658 441 aa10.26□□□□□ -0.77
LETMD1-236ENST00000553043 SAFB2Q14151 953 aaKnown RBP eCLIP10.26□□□□□ -0.77
LETMD1-236ENST00000553043 ABCA3Q99758 1704 aa10.26□□□□□ -0.77
LETMD1-236ENST00000553043 ADGRF5Q8IZF2 1346 aa10.26□□□□□ -0.77
LETMD1-236ENST00000553043 COL14A1Q05707 1796 aaKnown RBP10.26□□□□□ -0.77
LETMD1-236ENST00000553043 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
LETMD1-236ENST00000553043 BARGINQ6ZT62 677 aa10.25□□□□□ -0.77
LETMD1-236ENST00000553043 MYOM1P52179 1685 aa10.25□□□□□ -0.77
LETMD1-236ENST00000553043 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
LETMD1-236ENST00000553043 PLSCR1O15162 318 aa10.24□□□□□ -0.77
LETMD1-236ENST00000553043 ZC3H6P61129 1189 aaKnown RBP10.24□□□□□ -0.77
LETMD1-236ENST00000553043 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
LETMD1-236ENST00000553043 GPRASP1Q5JY77 1395 aa10.24□□□□□ -0.77
LETMD1-236ENST00000553043 KIAA0232Q92628 1395 aa10.24□□□□□ -0.77
LETMD1-236ENST00000553043 LARP1Q6PKG0 1096 aaKnown RBP10.23□□□□□ -0.77
LETMD1-236ENST00000553043 PTF1AQ7RTS3 328 aa10.23□□□□□ -0.77
LETMD1-236ENST00000553043 PROM2Q8N271 834 aa10.23□□□□□ -0.77
LETMD1-236ENST00000553043 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
LETMD1-236ENST00000553043 ARXQ96QS3 562 aa10.23□□□□□ -0.77
LETMD1-236ENST00000553043 MTFR1LQ9H019 292 aa10.23□□□□□ -0.77
LETMD1-236ENST00000553043 STK32BQ9NY57 414 aa10.23□□□□□ -0.77
LETMD1-236ENST00000553043 KLHL34Q8N239 644 aa10.22□□□□□ -0.77
LETMD1-236ENST00000553043 SGIP1Q9BQI5 828 aa10.22□□□□□ -0.77
LETMD1-236ENST00000553043 CAPN15O75808 1086 aa10.21□□□□□ -0.77
LETMD1-236ENST00000553043 HSPA6P17066 643 aa10.21□□□□□ -0.77
LETMD1-236ENST00000553043 SLC15A2Q16348 729 aa10.21□□□□□ -0.77
LETMD1-236ENST00000553043 RGL3Q3MIN7 710 aa10.21□□□□□ -0.77
LETMD1-236ENST00000553043 ACIN1Q9UKV3 1341 aaKnown RBP10.21□□□□□ -0.78
LETMD1-236ENST00000553043 C11orf95C9JLR9 678 aaPredicted RBP10.2□□□□□ -0.78
LETMD1-236ENST00000553043 NUTM2GQ5VZR2 741 aa10.2□□□□□ -0.78
LETMD1-236ENST00000553043 CASZ1Q86V15 1759 aa10.2□□□□□ -0.78
LETMD1-236ENST00000553043 NGDNQ8NEJ9 315 aaKnown RBP10.2□□□□□ -0.78
LETMD1-236ENST00000553043 SIRT1Q96EB6 747 aa10.2□□□□□ -0.78
LETMD1-236ENST00000553043 DLC1Q96QB1 1528 aa10.2□□□□□ -0.78
LETMD1-236ENST00000553043 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
LETMD1-236ENST00000553043 YTHDC2Q9H6S0 1430 aaKnown RBP10.2□□□□□ -0.78
LETMD1-236ENST00000553043 CHD4Q14839 1912 aa10.19□□□□□ -0.78
LETMD1-236ENST00000553043 KIF1BO60333 1816 aa10.19□□□□□ -0.78
LETMD1-236ENST00000553043 SSH2Q76I76 1423 aa10.19□□□□□ -0.78
LETMD1-236ENST00000553043 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
LETMD1-236ENST00000553043 HIRIP3Q9BW71 556 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-236ENST00000553043 POGKQ9P215 609 aa10.18□□□□□ -0.78
LETMD1-236ENST00000553043 OVOS2A0A0G2JMS6 1433 aa10.17□□□□□ -0.78
LETMD1-236ENST00000553043 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
LETMD1-236ENST00000553043 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
LETMD1-236ENST00000553043 CEP350Q5VT06 3117 aa10.17□□□□□ -0.78
LETMD1-236ENST00000553043 RGPD8O14715 1765 aaPredicted RBP10.17□□□□□ -0.78
LETMD1-236ENST00000553043 THRAP3Q9Y2W1 955 aaKnown RBP10.17□□□□□ -0.78
LETMD1-236ENST00000553043 ANKARQ7Z5J8 1434 aa10.16□□□□□ -0.78
LETMD1-236ENST00000553043 MAP3K5Q99683 1374 aa10.16□□□□□ -0.78
LETMD1-236ENST00000553043 GPBP1L1Q9HC44 474 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-236ENST00000553043 PRR36Q9H6K5 1346 aa10.15□□□□□ -0.78
LETMD1-236ENST00000553043 DDB1Q16531 1140 aa10.15□□□□□ -0.78
LETMD1-236ENST00000553043 PPLO60437 1756 aa10.14□□□□□ -0.79
LETMD1-236ENST00000553043 SHANK3Q9BYB0 1731 aa10.14□□□□□ -0.79
LETMD1-236ENST00000553043 TRPM3Q9HCF6 1732 aaPredicted RBP10.14□□□□□ -0.79
LETMD1-236ENST00000553043 ZNF526Q8TF50 670 aaPredicted RBP10.14□□□□□ -0.79
LETMD1-236ENST00000553043 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
LETMD1-236ENST00000553043 ALS2Q96Q42 1657 aa10.14□□□□□ -0.79
LETMD1-236ENST00000553043 ATP10DQ9P241 1426 aa10.14□□□□□ -0.79
LETMD1-236ENST00000553043 DHX57Q6P158 1386 aaKnown RBP10.14□□□□□ -0.79
LETMD1-236ENST00000553043 ANKRD30BQ9BXX2 1392 aa10.14□□□□□ -0.79
LETMD1-236ENST00000553043 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
LETMD1-236ENST00000553043 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
LETMD1-236ENST00000553043 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
LETMD1-236ENST00000553043 NLGN2Q8NFZ4 835 aa10.13□□□□□ -0.79
LETMD1-236ENST00000553043 C14orf93Q9H972 538 aaKnown RBP10.13□□□□□ -0.79
LETMD1-236ENST00000553043 MINK1Q8N4C8 1332 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-236ENST00000553043 ZBTB7CA1YPR0 619 aa10.12□□□□□ -0.79
LETMD1-236ENST00000553043 GRIN3BO60391 1043 aa10.12□□□□□ -0.79
LETMD1-236ENST00000553043 YBX3P16989 372 aaKnown RBP eCLIP10.12□□□□□ -0.795e-13■■□□□ 14.4
LETMD1-236ENST00000553043 MARCH10Q8NA82 808 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-236ENST00000553043 PIK3C2GO75747 1445 aa10.12□□□□□ -0.79
LETMD1-236ENST00000553043 KNDC1Q76NI1 1749 aa10.12□□□□□ -0.79
LETMD1-236ENST00000553043 POLD1P28340 1107 aa10.11□□□□□ -0.79
LETMD1-236ENST00000553043 WASLO00401 505 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-236ENST00000553043 AMER1Q5JTC6 1135 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-236ENST00000553043 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
LETMD1-236ENST00000553043 ATP7BP35670 1465 aa10.1□□□□□ -0.79
LETMD1-236ENST00000553043 CRB1P82279 1406 aa10.09□□□□□ -0.79
LETMD1-236ENST00000553043 RGPD3A6NKT7 1758 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-236ENST00000553043 RGPD4Q7Z3J3 1758 aa10.09□□□□□ -0.79
LETMD1-236ENST00000553043 ZNF827Q17R98 1081 aa10.09□□□□□ -0.79
LETMD1-236ENST00000553043 TOM1L2Q6ZVM7 507 aa10.09□□□□□ -0.79
LETMD1-236ENST00000553043 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
LETMD1-236ENST00000553043 TRAK1Q9UPV9 953 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms